RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 CDC45O75419 566 aa14.74□□□□□ -0.05
SYN3-202ENST00000358763 ILDR1Q86SU0 546 aaPredicted RBP14.74□□□□□ -0.05
SYN3-202ENST00000358763 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.74□□□□□ -0.05
SYN3-202ENST00000358763 EIF5P55010 431 aaKnown RBP14.74□□□□□ -0.05
SYN3-202ENST00000358763 FOXO4P98177 505 aa14.74□□□□□ -0.05
SYN3-202ENST00000358763 G3BP1Q13283 466 aaKnown RBP eCLIP14.74□□□□□ -0.05
SYN3-202ENST00000358763 BTAF1O14981 1849 aa14.74□□□□□ -0.05
SYN3-202ENST00000358763 COL15A1P39059 1388 aa14.74□□□□□ -0.05
SYN3-202ENST00000358763 FAM89AQ96GI7 184 aa14.73□□□□□ -0.05
SYN3-202ENST00000358763 SASH1O94885 1247 aa14.73□□□□□ -0.05
SYN3-202ENST00000358763 LINC00116Q8NCU8 138 aa14.73□□□□□ -0.05
SYN3-202ENST00000358763 RFX5P48382 616 aaPredicted RBP14.72□□□□□ -0.05
SYN3-202ENST00000358763 NHSQ6T4R5 1651 aa14.72□□□□□ -0.05
SYN3-202ENST00000358763 ERC1Q8IUD2 1116 aa14.72□□□□□ -0.05
SYN3-202ENST00000358763 SYNE4Q8N205 404 aa14.72□□□□□ -0.05
SYN3-202ENST00000358763 CLASRPQ8N2M8 674 aaKnown RBP14.72□□□□□ -0.05
SYN3-202ENST00000358763 TBC1D32Q96NH3 1257 aa14.72□□□□□ -0.05
SYN3-202ENST00000358763 NUP98P52948 1817 aa14.72□□□□□ -0.05
SYN3-202ENST00000358763 PTPN12Q05209 780 aaKnown RBP14.72□□□□□ -0.05
SYN3-202ENST00000358763 NLRP10Q86W26 655 aa14.72□□□□□ -0.05
SYN3-202ENST00000358763 STAP2Q9UGK3 403 aa14.72□□□□□ -0.05
SYN3-202ENST00000358763 COL5A3P25940 1745 aaPredicted RBP14.72□□□□□ -0.05
SYN3-202ENST00000358763 CICQ96RK0 1608 aaPredicted RBP14.72□□□□□ -0.05
SYN3-202ENST00000358763 ONECUT3O60422 494 aaPredicted RBP14.71□□□□□ -0.05
SYN3-202ENST00000358763 TRIM28Q13263 835 aaKnown RBP14.71□□□□□ -0.05
SYN3-202ENST00000358763 EP400Q96L91 3159 aa14.71□□□□□ -0.05
SYN3-202ENST00000358763 ANKRD36CQ5JPF3 1778 aa14.71□□□□□ -0.05
SYN3-202ENST00000358763 RREB1Q92766 1687 aa14.71□□□□□ -0.05
SYN3-202ENST00000358763 CCDC85AQ96PX6 553 aaPredicted RBP14.71□□□□□ -0.05
SYN3-202ENST00000358763 TRIM6-TRIM34B2RNG4 842 aa14.7□□□□□ -0.06
SYN3-202ENST00000358763 HSP90AB3PQ58FF7 597 aa14.7□□□□□ -0.06
SYN3-202ENST00000358763 AACSQ86V21 672 aa14.7□□□□□ -0.06
SYN3-202ENST00000358763 COPRSQ9NQ92 184 aa14.7□□□□□ -0.06
SYN3-202ENST00000358763 SMIM5Q71RC9 77 aa14.7□□□□□ -0.06
SYN3-202ENST00000358763 RILPL2Q969X0 211 aa14.7□□□□□ -0.06
SYN3-202ENST00000358763 C22orf23Q9BZE7 217 aa14.7□□□□□ -0.06
SYN3-202ENST00000358763 TUBGCP6Q96RT7 1819 aa14.7□□□□□ -0.06
SYN3-202ENST00000358763 ERVV-1B6SEH8 477 aa14.7□□□□□ -0.06
SYN3-202ENST00000358763 MAP4K4O95819 1239 aaPredicted RBP14.7□□□□□ -0.06
SYN3-202ENST00000358763 PCCAP05165 728 aaPredicted RBP14.7□□□□□ -0.06
SYN3-202ENST00000358763 UBN2Q6ZU65 1347 aa14.7□□□□□ -0.06
SYN3-202ENST00000358763 IFIT2P09913 472 aaKnown RBP14.69□□□□□ -0.06
SYN3-202ENST00000358763 ZBTB38Q8NAP3 1195 aaPredicted RBP14.69□□□□□ -0.06
SYN3-202ENST00000358763 SBF2Q86WG5 1849 aa14.69□□□□□ -0.06
SYN3-202ENST00000358763 FAM177BA6PVY3 158 aa14.69□□□□□ -0.06
SYN3-202ENST00000358763 PI4K2BQ8TCG2 481 aa14.69□□□□□ -0.06
SYN3-202ENST00000358763 EAF2Q96CJ1 260 aaPredicted RBP14.69□□□□□ -0.06
SYN3-202ENST00000358763 DDRGK1Q96HY6 314 aa14.69□□□□□ -0.06
SYN3-202ENST00000358763 ZNF594Q96JF6 807 aaPredicted RBP14.68□□□□□ -0.06
SYN3-202ENST00000358763 CCDC8Q9H0W5 538 aaPredicted RBP14.68□□□□□ -0.06
SYN3-202ENST00000358763 TLR7Q9NYK1 1049 aaKnown RBP14.68□□□□□ -0.06
SYN3-202ENST00000358763 TRMT112Q9UI30 125 aaKnown RBP14.68□□□□□ -0.06
SYN3-202ENST00000358763 CAMTA2O94983 1202 aa14.68□□□□□ -0.06
SYN3-202ENST00000358763 SLC4A3P48751 1232 aa14.68□□□□□ -0.06
SYN3-202ENST00000358763 AOX1Q06278 1338 aa14.68□□□□□ -0.06
SYN3-202ENST00000358763 CCNL1Q9UK58 526 aaPredicted RBP14.68□□□□□ -0.06
SYN3-202ENST00000358763 TFCP2Q12800 502 aa14.67□□□□□ -0.06
SYN3-202ENST00000358763 ZNF831Q5JPB2 1677 aa14.67□□□□□ -0.06
SYN3-202ENST00000358763 ZNF34Q8IZ26 560 aa14.67□□□□□ -0.06
SYN3-202ENST00000358763 BRWD3Q6RI45 1802 aa14.66□□□□□ -0.06
SYN3-202ENST00000358763 CASC1Q6TDU7 716 aa14.66□□□□□ -0.06
SYN3-202ENST00000358763 IRS4O14654 1257 aaPredicted RBP14.65□□□□□ -0.06
SYN3-202ENST00000358763 LRRC24Q50LG9 513 aa14.65□□□□□ -0.06
SYN3-202ENST00000358763 ECHDC1Q9NTX5 307 aa14.65□□□□□ -0.06
SYN3-202ENST00000358763 TTC41PQ6P2S7 1318 aa14.65□□□□□ -0.06
SYN3-202ENST00000358763 CDHR2Q9BYE9 1310 aa14.65□□□□□ -0.06
SYN3-202ENST00000358763 CNTNAP4Q9C0A0 1308 aa14.65□□□□□ -0.06
SYN3-202ENST00000358763 USP42Q9H9J4 1324 aaKnown RBP14.65□□□□□ -0.06
SYN3-202ENST00000358763 CCDC57Q2TAC2 916 aa14.65□□□□□ -0.06
SYN3-202ENST00000358763 SUSD4Q5VX71 490 aa14.65□□□□□ -0.06
SYN3-202ENST00000358763 KRT27Q7Z3Y8 459 aa14.65□□□□□ -0.06
SYN3-202ENST00000358763 GPATCH3Q96I76 525 aa14.65□□□□□ -0.06
SYN3-202ENST00000358763 ERICH6Q7L0X2 663 aa14.64□□□□□ -0.07
SYN3-202ENST00000358763 PLA2G12BQ9BX93 195 aa14.64□□□□□ -0.07
SYN3-202ENST00000358763 PUS3Q9BZE2 481 aaKnown RBP14.64□□□□□ -0.07
SYN3-202ENST00000358763 NIP7Q9Y221 180 aaKnown RBP eCLIP14.64□□□□□ -0.07
SYN3-202ENST00000358763 GNPATO15228 680 aa14.64□□□□□ -0.07
SYN3-202ENST00000358763 GLRX3O76003 335 aaKnown RBP14.64□□□□□ -0.07
SYN3-202ENST00000358763 TNNI3KQ59H18 835 aa14.64□□□□□ -0.07
SYN3-202ENST00000358763 ATG9AQ7Z3C6 839 aa14.64□□□□□ -0.07
SYN3-202ENST00000358763 FPGT-TNNI3KV9GXZ4 949 aa14.64□□□□□ -0.07
SYN3-202ENST00000358763 ERC2O15083 957 aa14.63□□□□□ -0.07
SYN3-202ENST00000358763 CTSWP56202 376 aa14.63□□□□□ -0.07
SYN3-202ENST00000358763 AK9Q5TCS8 1911 aa14.63□□□□□ -0.07
SYN3-202ENST00000358763 LY75O60449 1722 aa14.63□□□□□ -0.07
SYN3-202ENST00000358763 HCLS1P14317 486 aaPredicted RBP14.63□□□□□ -0.07
SYN3-202ENST00000358763 TAF7LQ5H9L4 462 aa14.63□□□□□ -0.07
SYN3-202ENST00000358763 AMIGO3Q86WK7 504 aa14.63□□□□□ -0.07
SYN3-202ENST00000358763 BCL11BQ9C0K0 894 aaPredicted RBP14.63□□□□□ -0.07
SYN3-202ENST00000358763 GREM2Q9H772 168 aa14.63□□□□□ -0.07
SYN3-202ENST00000358763 BCORQ6W2J9 1755 aa14.62□□□□□ -0.07
SYN3-202ENST00000358763 EYA2O00167 538 aa14.62□□□□□ -0.07
SYN3-202ENST00000358763 CSF1RP07333 972 aa14.62□□□□□ -0.07
SYN3-202ENST00000358763 CHMLP26374 656 aa14.62□□□□□ -0.07
SYN3-202ENST00000358763 TTLL11Q8NHH1 800 aa14.62□□□□□ -0.07
SYN3-202ENST00000358763 DBNLQ9UJU6 430 aaKnown RBP14.62□□□□□ -0.07
SYN3-202ENST00000358763 RBM25P49756 843 aaKnown RBP14.62□□□□□ -0.07
SYN3-202ENST00000358763 IFIT5Q13325 482 aaKnown RBP14.62□□□□□ -0.07
SYN3-202ENST00000358763 DAXXQ9UER7 740 aaPredicted RBP14.62□□□□□ -0.07
SYN3-202ENST00000358763 TRIM37O94972 964 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms