RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 FBXO3Q9UK99 471 aa16.31■□□□□ 0.2
NFIX-201ENST00000358552 APBB1O00213 710 aa16.31■□□□□ 0.2
NFIX-201ENST00000358552 ERC2O15083 957 aa16.31■□□□□ 0.2
NFIX-201ENST00000358552 CASP7P55210 303 aa16.31■□□□□ 0.2
NFIX-201ENST00000358552 KAZALD1Q96I82 304 aa16.31■□□□□ 0.2
NFIX-201ENST00000358552 AK7Q96M32 723 aa16.31■□□□□ 0.2
NFIX-201ENST00000358552 SLC4A9Q96Q91 983 aa16.31■□□□□ 0.2
NFIX-201ENST00000358552 PLA2G12BQ9BX93 195 aa16.31■□□□□ 0.2
NFIX-201ENST00000358552 BCL11BQ9C0K0 894 aaPredicted RBP16.31■□□□□ 0.2
NFIX-201ENST00000358552 ZBTB3Q9H5J0 574 aa16.31■□□□□ 0.2
NFIX-201ENST00000358552 LY75O60449 1722 aa16.3■□□□□ 0.2
NFIX-201ENST00000358552 SALL3Q9BXA9 1300 aa16.3■□□□□ 0.2
NFIX-201ENST00000358552 ATP5J2-PTCD1G3V325 749 aa16.3■□□□□ 0.2
NFIX-201ENST00000358552 PCCAP05165 728 aaPredicted RBP16.3■□□□□ 0.2
NFIX-201ENST00000358552 EIF5P55010 431 aaKnown RBP16.3■□□□□ 0.2
NFIX-201ENST00000358552 PTF1AQ7RTS3 328 aa16.3■□□□□ 0.2
NFIX-201ENST00000358552 TJP1Q07157 1748 aa16.3■□□□□ 0.2
NFIX-201ENST00000358552 NUP188Q5SRE5 1749 aa16.29■□□□□ 0.2
NFIX-201ENST00000358552 SMARCA5O60264 1052 aaPredicted RBP16.29■□□□□ 0.2
NFIX-201ENST00000358552 ZBTB38Q8NAP3 1195 aaPredicted RBP16.29■□□□□ 0.2
NFIX-201ENST00000358552 USP42Q9H9J4 1324 aaKnown RBP16.29■□□□□ 0.2
NFIX-201ENST00000358552 RC3H1Q5TC82 1133 aaKnown RBP16.28■□□□□ 0.2
NFIX-201ENST00000358552 DZIP3Q86Y13 1208 aaKnown RBP16.28■□□□□ 0.2
NFIX-201ENST00000358552 C16orf71Q8IYS4 520 aaPredicted RBP16.28■□□□□ 0.2
NFIX-201ENST00000358552 TBC1D32Q96NH3 1257 aa16.28■□□□□ 0.2
NFIX-201ENST00000358552 ZBTB1Q9Y2K1 713 aa16.28■□□□□ 0.2
NFIX-201ENST00000358552 AFDNP55196 1824 aaKnown RBP16.28■□□□□ 0.2
NFIX-201ENST00000358552 CDHR2Q9BYE9 1310 aa16.28■□□□□ 0.2
NFIX-201ENST00000358552 IL27Q8NEV9 243 aa16.28■□□□□ 0.2
NFIX-201ENST00000358552 ZNF652Q9Y2D9 606 aa16.28■□□□□ 0.2
NFIX-201ENST00000358552 ZNF330Q9Y3S2 320 aaPredicted RBP16.28■□□□□ 0.2
NFIX-201ENST00000358552 EPB41L2O43491 1005 aaKnown RBP16.27■□□□□ 0.19
NFIX-201ENST00000358552 GLRX3O76003 335 aaKnown RBP16.27■□□□□ 0.19
NFIX-201ENST00000358552 CRKLP46109 303 aaKnown RBP16.27■□□□□ 0.19
NFIX-201ENST00000358552 BECN1Q14457 450 aa16.27■□□□□ 0.19
NFIX-201ENST00000358552 PARP10Q53GL7 1025 aa16.27■□□□□ 0.19
NFIX-201ENST00000358552 CLEC4GQ6UXB4 293 aa16.27■□□□□ 0.19
NFIX-201ENST00000358552 MYH14Q7Z406 1995 aaKnown RBP16.27■□□□□ 0.19
NFIX-201ENST00000358552 COL5A3P25940 1745 aaPredicted RBP16.26■□□□□ 0.19
NFIX-201ENST00000358552 IFIT2P09913 472 aaKnown RBP16.26■□□□□ 0.19
NFIX-201ENST00000358552 GSPT1P15170 499 aaKnown RBP16.26■□□□□ 0.19
NFIX-201ENST00000358552 INTS5Q6P9B9 1019 aaKnown RBP16.26■□□□□ 0.19
NFIX-201ENST00000358552 TAF1LQ8IZX4 1826 aa16.26■□□□□ 0.19
NFIX-201ENST00000358552 CNTNAP4Q9C0A0 1308 aa16.26■□□□□ 0.19
NFIX-201ENST00000358552 REC8O95072 547 aa16.25■□□□□ 0.19
NFIX-201ENST00000358552 TBC1D9Q6ZT07 1266 aa16.25■□□□□ 0.19
NFIX-201ENST00000358552 TICAM2Q86XR7 235 aa16.25■□□□□ 0.19
NFIX-201ENST00000358552 ARXQ96QS3 562 aa16.25■□□□□ 0.19
NFIX-201ENST00000358552 C22orf23Q9BZE7 217 aa16.25■□□□□ 0.19
NFIX-201ENST00000358552 TRIM37O94972 964 aa16.25■□□□□ 0.19
NFIX-201ENST00000358552 SDSP20132 328 aa16.25■□□□□ 0.19
NFIX-201ENST00000358552 LMBR1LQ6UX01 489 aa16.25■□□□□ 0.19
NFIX-201ENST00000358552 GPR108Q9NPR9 543 aa16.25■□□□□ 0.19
NFIX-201ENST00000358552 CIAO1O76071 339 aa16.24■□□□□ 0.19
NFIX-201ENST00000358552 RFX5P48382 616 aaPredicted RBP16.24■□□□□ 0.19
NFIX-201ENST00000358552 RBM25P49756 843 aaKnown RBP16.24■□□□□ 0.19
NFIX-201ENST00000358552 FOXO4P98177 505 aa16.24■□□□□ 0.19
NFIX-201ENST00000358552 NLRP10Q86W26 655 aa16.24■□□□□ 0.19
NFIX-201ENST00000358552 ECHDC1Q9NTX5 307 aa16.24■□□□□ 0.19
NFIX-201ENST00000358552 RREB1Q92766 1687 aa16.23■□□□□ 0.19
NFIX-201ENST00000358552 SEC24BO95487 1268 aa16.23■□□□□ 0.19
NFIX-201ENST00000358552 IL15P40933 162 aaPredicted RBP16.23■□□□□ 0.19
NFIX-201ENST00000358552 PTPN12Q05209 780 aaKnown RBP16.23■□□□□ 0.19
NFIX-201ENST00000358552 CCDC57Q2TAC2 916 aa16.23■□□□□ 0.19
NFIX-201ENST00000358552 ZNF34Q8IZ26 560 aa16.23■□□□□ 0.19
NFIX-201ENST00000358552 CNTROBQ8N137 903 aa16.23■□□□□ 0.19
NFIX-201ENST00000358552 OTUD7AQ8TE49 926 aaPredicted RBP16.23■□□□□ 0.19
NFIX-201ENST00000358552 IL1RAPL2Q9NP60 686 aa16.23■□□□□ 0.19
NFIX-201ENST00000358552 CSF1RP07333 972 aa16.22■□□□□ 0.19
NFIX-201ENST00000358552 MFAP1P55081 439 aaKnown RBP16.22■□□□□ 0.19
NFIX-201ENST00000358552 EPHA10Q5JZY3 1008 aa16.22■□□□□ 0.19
NFIX-201ENST00000358552 ITPK1Q13572 414 aa16.22■□□□□ 0.19
NFIX-201ENST00000358552 HIP1O00291 1037 aa16.21■□□□□ 0.19
NFIX-201ENST00000358552 TNS1Q9HBL0 1735 aaKnown RBP16.21■□□□□ 0.19
NFIX-201ENST00000358552 PA2G4Q9UQ80 394 aaKnown RBP16.21■□□□□ 0.19
NFIX-201ENST00000358552 TRIM6-TRIM34B2RNG4 842 aa16.2■□□□□ 0.18
NFIX-201ENST00000358552 SASH1O94885 1247 aa16.2■□□□□ 0.18
NFIX-201ENST00000358552 AACSQ86V21 672 aa16.2■□□□□ 0.18
NFIX-201ENST00000358552 TRMT112Q9UI30 125 aaKnown RBP16.2■□□□□ 0.18
NFIX-201ENST00000358552 CHMP3Q9Y3E7 222 aa16.2■□□□□ 0.18
NFIX-201ENST00000358552 PDE8AO60658 829 aa16.19■□□□□ 0.18
NFIX-201ENST00000358552 IFIT5Q13325 482 aaKnown RBP16.19■□□□□ 0.18
NFIX-201ENST00000358552 HLFQ16534 295 aa16.19■□□□□ 0.18
NFIX-201ENST00000358552 NUTM1Q86Y26 1132 aa16.19■□□□□ 0.18
NFIX-201ENST00000358552 TBC1D2BQ9UPU7 963 aa16.19■□□□□ 0.18
NFIX-201ENST00000358552 AKAP2Q9Y2D5 859 aa16.19■□□□□ 0.18
NFIX-201ENST00000358552 RGPD3A6NKT7 1758 aaPredicted RBP16.19■□□□□ 0.18
NFIX-201ENST00000358552 RGPD4Q7Z3J3 1758 aa16.19■□□□□ 0.18
NFIX-201ENST00000358552 EYA2O00167 538 aa16.19■□□□□ 0.18
NFIX-201ENST00000358552 RPS6KA4O75676 772 aa16.19■□□□□ 0.18
NFIX-201ENST00000358552 CAMTA2O94983 1202 aa16.19■□□□□ 0.18
NFIX-201ENST00000358552 PI4K2BQ8TCG2 481 aa16.19■□□□□ 0.18
NFIX-201ENST00000358552 UTP14AQ9BVJ6 771 aaKnown RBP16.19■□□□□ 0.18
NFIX-201ENST00000358552 CCNL1Q9UK58 526 aaPredicted RBP16.19■□□□□ 0.18
NFIX-201ENST00000358552 ANKRD36CQ5JPF3 1778 aa16.18■□□□□ 0.18
NFIX-201ENST00000358552 SH3TC1Q8TE82 1336 aa16.18■□□□□ 0.18
NFIX-201ENST00000358552 PLSCR1O15162 318 aa16.18■□□□□ 0.18
NFIX-201ENST00000358552 SLC27A3Q5K4L6 730 aa16.18■□□□□ 0.18
NFIX-201ENST00000358552 RUFY2Q8WXA3 655 aa16.18■□□□□ 0.18
NFIX-201ENST00000358552 EVI5LQ96CN4 794 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms