RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 LSG1Q9H089 658 aaKnown RBP19.34■□□□□ 0.69
PTPN5-201ENST00000358540 NDUFB9Q9Y6M9 179 aa19.34■□□□□ 0.69
PTPN5-201ENST00000358540 RASEFQ8IZ41 740 aa19.34■□□□□ 0.69
PTPN5-201ENST00000358540 PLBD2Q8NHP8 589 aa19.34■□□□□ 0.69
PTPN5-201ENST00000358540 EDC3Q96F86 508 aaKnown RBP19.34■□□□□ 0.69
PTPN5-201ENST00000358540 HSPA4P34932 840 aa19.33■□□□□ 0.69
PTPN5-201ENST00000358540 RBM10P98175 930 aaKnown RBP19.33■□□□□ 0.69
PTPN5-201ENST00000358540 RAD50Q92878 1312 aa19.33■□□□□ 0.68
PTPN5-201ENST00000358540 CPA1P15085 419 aa19.33■□□□□ 0.68
PTPN5-201ENST00000358540 ERVV-2B6SEH9 535 aa19.32■□□□□ 0.68
PTPN5-201ENST00000358540 BAG4O95429 457 aaKnown RBP19.32■□□□□ 0.68
PTPN5-201ENST00000358540 PTH1RQ03431 593 aa19.32■□□□□ 0.68
PTPN5-201ENST00000358540 FAM227BQ96M60 508 aa19.32■□□□□ 0.68
PTPN5-201ENST00000358540 TFCP2Q12800 502 aa19.31■□□□□ 0.68
PTPN5-201ENST00000358540 LMBR1LQ6UX01 489 aa19.31■□□□□ 0.68
PTPN5-201ENST00000358540 GLI3P10071 1580 aa19.31■□□□□ 0.68
PTPN5-201ENST00000358540 DTNBO60941 627 aa19.31■□□□□ 0.68
PTPN5-201ENST00000358540 ANAPC15P60006 121 aa19.31■□□□□ 0.68
PTPN5-201ENST00000358540 PTPN12Q05209 780 aaKnown RBP19.31■□□□□ 0.68
PTPN5-201ENST00000358540 MCTP1Q6DN14 999 aa19.31■□□□□ 0.68
PTPN5-201ENST00000358540 SNX14Q9Y5W7 946 aa19.31■□□□□ 0.68
PTPN5-201ENST00000358540 ISY1Q9ULR0 285 aaKnown RBP19.31■□□□□ 0.68
PTPN5-201ENST00000358540 RFX5P48382 616 aaPredicted RBP19.3■□□□□ 0.68
PTPN5-201ENST00000358540 TMOD3Q9NYL9 352 aa19.3■□□□□ 0.68
PTPN5-201ENST00000358540 ASAP1Q9ULH1 1129 aa19.3■□□□□ 0.68
PTPN5-201ENST00000358540 ZDHHC9Q9Y397 364 aa19.29■□□□□ 0.68
PTPN5-201ENST00000358540 NUCB2P80303 420 aa19.29■□□□□ 0.68
PTPN5-201ENST00000358540 NKX1-1Q15270 411 aaPredicted RBP19.29■□□□□ 0.68
PTPN5-201ENST00000358540 EVI5LQ96CN4 794 aa19.29■□□□□ 0.68
PTPN5-201ENST00000358540 PARP4Q9UKK3 1724 aaKnown RBP19.29■□□□□ 0.68
PTPN5-201ENST00000358540 NMIQ13287 307 aaPredicted RBP19.29■□□□□ 0.68
PTPN5-201ENST00000358540 PRPF40BQ6NWY9 871 aaKnown RBP19.29■□□□□ 0.68
PTPN5-201ENST00000358540 FSD1Q9BTV5 496 aa19.29■□□□□ 0.68
PTPN5-201ENST00000358540 CASP7P55210 303 aa19.28■□□□□ 0.68
PTPN5-201ENST00000358540 CHGBP05060 677 aa19.28■□□□□ 0.68
PTPN5-201ENST00000358540 DBNLQ9UJU6 430 aaKnown RBP19.28■□□□□ 0.68
PTPN5-201ENST00000358540 CYP2E1P05181 493 aaPredicted RBP19.27■□□□□ 0.68
PTPN5-201ENST00000358540 CWC22Q9HCG8 908 aaKnown RBP19.27■□□□□ 0.68
PTPN5-201ENST00000358540 COPRSQ9NQ92 184 aa19.27■□□□□ 0.68
PTPN5-201ENST00000358540 FOXD4L6Q3SYB3 417 aaPredicted RBP19.27■□□□□ 0.68
PTPN5-201ENST00000358540 FOXD4L3Q6VB84 417 aaPredicted RBP19.27■□□□□ 0.68
PTPN5-201ENST00000358540 DNAJC10Q8IXB1 793 aa19.27■□□□□ 0.68
PTPN5-201ENST00000358540 KCPQ6ZWJ8 1503 aa19.27■□□□□ 0.67
PTPN5-201ENST00000358540 PIGBQ92521 554 aa19.27■□□□□ 0.67
PTPN5-201ENST00000358540 CCDC85AQ96PX6 553 aaPredicted RBP19.27■□□□□ 0.67
PTPN5-201ENST00000358540 CWC25Q9NXE8 425 aaPredicted RBP19.27■□□□□ 0.67
PTPN5-201ENST00000358540 PLEKHG2Q9H7P9 1386 aa19.26■□□□□ 0.67
PTPN5-201ENST00000358540 ABCA3Q99758 1704 aa19.26■□□□□ 0.67
PTPN5-201ENST00000358540 KAT6BQ8WYB5 2073 aa19.26■□□□□ 0.67
PTPN5-201ENST00000358540 A0A0D9SFI3 127 aa19.26■□□□□ 0.67
PTPN5-201ENST00000358540 RABL6Q3YEC7 729 aaPredicted RBP19.26■□□□□ 0.67
PTPN5-201ENST00000358540 TNNI3KQ59H18 835 aa19.26■□□□□ 0.67
PTPN5-201ENST00000358540 RUFY2Q8WXA3 655 aa19.26■□□□□ 0.67
PTPN5-201ENST00000358540 SYTL4Q96C24 671 aaPredicted RBP19.26■□□□□ 0.67
PTPN5-201ENST00000358540 DBNDD2Q9BQY9 259 aa19.26■□□□□ 0.67
PTPN5-201ENST00000358540 FPGT-TNNI3KV9GXZ4 949 aa19.26■□□□□ 0.67
PTPN5-201ENST00000358540 ARFGEF2Q9Y6D5 1785 aa19.26■□□□□ 0.67
PTPN5-201ENST00000358540 AFDNP55196 1824 aaKnown RBP19.26■□□□□ 0.67
PTPN5-201ENST00000358540 A0A0G2JS52 829 aa19.26■□□□□ 0.67
PTPN5-201ENST00000358540 ZNF594Q96JF6 807 aaPredicted RBP19.26■□□□□ 0.67
PTPN5-201ENST00000358540 GOLGA6L22H0YM25 854 aa19.25■□□□□ 0.67
PTPN5-201ENST00000358540 CASTP20810 708 aaKnown RBP19.25■□□□□ 0.67
PTPN5-201ENST00000358540 ADCK5Q3MIX3 580 aa19.25■□□□□ 0.67
PTPN5-201ENST00000358540 DNAJC2Q99543 621 aaKnown RBP19.25■□□□□ 0.67
PTPN5-201ENST00000358540 FAM13BQ9NYF5 915 aa19.25■□□□□ 0.67
PTPN5-201ENST00000358540 KCNJ4P48050 445 aa19.25■□□□□ 0.67
PTPN5-201ENST00000358540 FOXO4P98177 505 aa19.25■□□□□ 0.67
PTPN5-201ENST00000358540 NCLP19338 710 aaKnown RBP19.25■□□□□ 0.67
PTPN5-201ENST00000358540 MCM2P49736 904 aa19.25■□□□□ 0.67
PTPN5-201ENST00000358540 AK2P54819 239 aa19.24■□□□□ 0.67
PTPN5-201ENST00000358540 DDX49Q9Y6V7 483 aaKnown RBP19.24■□□□□ 0.67
PTPN5-201ENST00000358540 H7C1W4 665 aa19.24■□□□□ 0.67
PTPN5-201ENST00000358540 COL9A3Q14050 684 aaPredicted RBP19.24■□□□□ 0.67
PTPN5-201ENST00000358540 JAKMIP1Q96N16 626 aaKnown RBP19.23■□□□□ 0.67
PTPN5-201ENST00000358540 MSNP26038 577 aaKnown RBP19.23■□□□□ 0.67
PTPN5-201ENST00000358540 CUL4AQ13619 759 aa19.23■□□□□ 0.67
PTPN5-201ENST00000358540 NEUROD6Q96NK8 337 aa19.23■□□□□ 0.67
PTPN5-201ENST00000358540 CCDC171Q6TFL3 1326 aa19.23■□□□□ 0.67
PTPN5-201ENST00000358540 ANP32BQ92688 251 aaKnown RBP19.23■□□□□ 0.67
PTPN5-201ENST00000358540 ARID3AQ99856 593 aa19.23■□□□□ 0.67
PTPN5-201ENST00000358540 ZNF589Q86UQ0 364 aaPredicted RBP19.22■□□□□ 0.67
PTPN5-201ENST00000358540 ZSCAN30Q86W11 494 aa19.22■□□□□ 0.67
PTPN5-201ENST00000358540 RBM8AQ9Y5S9 174 aaKnown RBP19.22■□□□□ 0.67
PTPN5-201ENST00000358540 LAMB4A4D0S4 1761 aa19.22■□□□□ 0.67
PTPN5-201ENST00000358540 SHANK3Q9BYB0 1731 aa19.22■□□□□ 0.67
PTPN5-201ENST00000358540 PRPF40AO75400 957 aaKnown RBP19.21■□□□□ 0.67
PTPN5-201ENST00000358540 NASPP49321 788 aaPredicted RBP19.21■□□□□ 0.67
PTPN5-201ENST00000358540 LRRC24Q50LG9 513 aa19.21■□□□□ 0.67
PTPN5-201ENST00000358540 ATG3Q9NT62 314 aa19.21■□□□□ 0.67
PTPN5-201ENST00000358540 DDX46Q7L014 1031 aaKnown RBP19.21■□□□□ 0.67
PTPN5-201ENST00000358540 RUFY3Q7L099 469 aa19.21■□□□□ 0.67
PTPN5-201ENST00000358540 TAF6LQ9Y6J9 622 aa19.21■□□□□ 0.67
PTPN5-201ENST00000358540 OFD1O75665 1012 aa19.2■□□□□ 0.66
PTPN5-201ENST00000358540 ADAMTS2O95450 1211 aa19.2■□□□□ 0.66
PTPN5-201ENST00000358540 LARGE1O95461 756 aa19.2■□□□□ 0.66
PTPN5-201ENST00000358540 TIMM10P62072 90 aa19.2■□□□□ 0.66
PTPN5-201ENST00000358540 CCDC173Q0VFZ6 552 aa19.2■□□□□ 0.66
PTPN5-201ENST00000358540 CLEC17AQ6ZS10 378 aa19.2■□□□□ 0.66
PTPN5-201ENST00000358540 TTC14Q96N46 770 aa19.2■□□□□ 0.66
PTPN5-201ENST00000358540 R3HCC1Q9Y3T6 440 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms