RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 PARP3Q9Y6F1 533 aa19.28■□□□□ 0.68
TPM1-206ENST00000358278 RLBP1P12271 317 aa19.27■□□□□ 0.68
TPM1-206ENST00000358278 TRIM28Q13263 835 aaKnown RBP19.27■□□□□ 0.68
TPM1-206ENST00000358278 PPP1R42Q7Z4L9 355 aa19.27■□□□□ 0.68
TPM1-206ENST00000358278 NBPF5PQ86XG9 351 aaPredicted RBP19.27■□□□□ 0.68
TPM1-206ENST00000358278 SRCAPQ6ZRS2 3230 aa19.27■□□□□ 0.68
TPM1-206ENST00000358278 ALDH1L1O75891 902 aa19.26■□□□□ 0.67
TPM1-206ENST00000358278 POLD1P28340 1107 aa19.26■□□□□ 0.67
TPM1-206ENST00000358278 DDR1Q08345 913 aa19.26■□□□□ 0.67
TPM1-206ENST00000358278 PDE3AQ14432 1141 aa19.26■□□□□ 0.67
TPM1-206ENST00000358278 TMEM57Q8N5G2 664 aa19.26■□□□□ 0.67
TPM1-206ENST00000358278 DDX60Q8IY21 1712 aaKnown RBP19.26■□□□□ 0.67
TPM1-206ENST00000358278 POLRMTO00411 1230 aaKnown RBP19.25■□□□□ 0.67
TPM1-206ENST00000358278 SUSD4Q5VX71 490 aa19.25■□□□□ 0.67
TPM1-206ENST00000358278 INTS3Q68E01 1043 aaKnown RBP19.25■□□□□ 0.67
TPM1-206ENST00000358278 ITPRIPQ8IWB1 547 aa19.25■□□□□ 0.67
TPM1-206ENST00000358278 NYXQ9GZU5 481 aa19.25■□□□□ 0.67
TPM1-206ENST00000358278 RNF123Q5XPI4 1314 aa19.25■□□□□ 0.67
TPM1-206ENST00000358278 IBTKQ9P2D0 1353 aaPredicted RBP19.25■□□□□ 0.67
TPM1-206ENST00000358278 GCKRQ14397 625 aa19.25■□□□□ 0.67
TPM1-206ENST00000358278 UTP14AQ9BVJ6 771 aaKnown RBP19.25■□□□□ 0.67
TPM1-206ENST00000358278 TRMT112Q9UI30 125 aaKnown RBP19.25■□□□□ 0.67
TPM1-206ENST00000358278 ANKRD31Q8N7Z5 1873 aa19.24■□□□□ 0.67
TPM1-206ENST00000358278 SERPINB2P05120 415 aa19.24■□□□□ 0.67
TPM1-206ENST00000358278 GTF2E1P29083 439 aaPredicted RBP19.24■□□□□ 0.67
TPM1-206ENST00000358278 C20orf194Q5TEA3 1177 aa19.24■□□□□ 0.67
TPM1-206ENST00000358278 CNBD1Q8NA66 436 aa19.24■□□□□ 0.67
TPM1-206ENST00000358278 C9orf78Q9NZ63 289 aaPredicted RBP19.24■□□□□ 0.67
TPM1-206ENST00000358278 NTSR2O95665 410 aa19.23■□□□□ 0.67
TPM1-206ENST00000358278 TPTE2Q6XPS3 522 aa19.23■□□□□ 0.67
TPM1-206ENST00000358278 SPON1Q9HCB6 807 aa19.23■□□□□ 0.67
TPM1-206ENST00000358278 RTL5Q5HYW3 569 aaPredicted RBP19.22■□□□□ 0.67
TPM1-206ENST00000358278 KIF13BQ9NQT8 1826 aa19.22■□□□□ 0.67
TPM1-206ENST00000358278 GRM8O00222 908 aa19.22■□□□□ 0.67
TPM1-206ENST00000358278 NUTM1Q86Y26 1132 aa19.22■□□□□ 0.67
TPM1-206ENST00000358278 ZBTB38Q8NAP3 1195 aaPredicted RBP19.22■□□□□ 0.67
TPM1-206ENST00000358278 COG6Q9Y2V7 657 aa19.22■□□□□ 0.67
TPM1-206ENST00000358278 SH3TC1Q8TE82 1336 aa19.21■□□□□ 0.67
TPM1-206ENST00000358278 ST5P78524 1137 aa19.21■□□□□ 0.67
TPM1-206ENST00000358278 MVPQ14764 893 aaKnown RBP19.21■□□□□ 0.67
TPM1-206ENST00000358278 UBE3BQ7Z3V4 1068 aa19.21■□□□□ 0.67
TPM1-206ENST00000358278 FAM89AQ96GI7 184 aa19.21■□□□□ 0.67
TPM1-206ENST00000358278 PCCAP05165 728 aaPredicted RBP19.2■□□□□ 0.66
TPM1-206ENST00000358278 PRR5LQ6MZQ0 368 aa19.2■□□□□ 0.66
TPM1-206ENST00000358278 TNRC6CQ9HCJ0 1690 aaKnown RBP19.2■□□□□ 0.66
TPM1-206ENST00000358278 JARID2Q92833 1246 aaPredicted RBP19.2■□□□□ 0.66
TPM1-206ENST00000358278 DDX19BQ9UMR2 479 aa19.2■□□□□ 0.66
TPM1-206ENST00000358278 PTGER2P43116 358 aa19.19■□□□□ 0.66
TPM1-206ENST00000358278 ERFEQ4G0M1 354 aa19.19■□□□□ 0.66
TPM1-206ENST00000358278 CCDC24Q8N4L8 307 aa19.19■□□□□ 0.66
TPM1-206ENST00000358278 SGIP1Q9BQI5 828 aa19.19■□□□□ 0.66
TPM1-206ENST00000358278 ABCC12Q96J65 1359 aa19.18■□□□□ 0.66
TPM1-206ENST00000358278 SYNE4Q8N205 404 aa19.18■□□□□ 0.66
TPM1-206ENST00000358278 MEIS3Q99687 375 aa19.18■□□□□ 0.66
TPM1-206ENST00000358278 USP44Q9H0E7 712 aa19.18■□□□□ 0.66
TPM1-206ENST00000358278 CACNA1SQ13698 1873 aa19.18■□□□□ 0.66
TPM1-206ENST00000358278 H7C1W4 665 aa19.17■□□□□ 0.66
TPM1-206ENST00000358278 IRS4O14654 1257 aaPredicted RBP19.17■□□□□ 0.66
TPM1-206ENST00000358278 NBPF7P0C2Y1 421 aaPredicted RBP19.17■□□□□ 0.66
TPM1-206ENST00000358278 UBTFL1P0CB47 393 aaPredicted RBP19.17■□□□□ 0.66
TPM1-206ENST00000358278 CDHR2Q9BYE9 1310 aa19.17■□□□□ 0.66
TPM1-206ENST00000358278 GNAI3P08754 354 aa19.17■□□□□ 0.66
TPM1-206ENST00000358278 HSP90B1P14625 803 aaKnown RBP19.17■□□□□ 0.66
TPM1-206ENST00000358278 COL11A2P13942 1736 aaPredicted RBP19.16■□□□□ 0.66
TPM1-206ENST00000358278 LRP5O75197 1615 aa19.16■□□□□ 0.66
TPM1-206ENST00000358278 UTYO14607 1347 aa19.16■□□□□ 0.66
TPM1-206ENST00000358278 C10orf71Q711Q0 1435 aa19.16■□□□□ 0.66
TPM1-206ENST00000358278 HCLS1P14317 486 aaPredicted RBP19.16■□□□□ 0.66
TPM1-206ENST00000358278 CHMP4BQ9H444 224 aaKnown RBP19.16■□□□□ 0.66
TPM1-206ENST00000358278 GOLGB1Q14789 3259 aaKnown RBP19.16■□□□□ 0.66
TPM1-206ENST00000358278 RIC1Q4ADV7 1423 aa19.15■□□□□ 0.66
TPM1-206ENST00000358278 CASP7P55210 303 aa19.15■□□□□ 0.66
TPM1-206ENST00000358278 IRX6P78412 446 aaPredicted RBP19.15■□□□□ 0.66
TPM1-206ENST00000358278 DLEC1Q9Y238 1755 aa19.15■□□□□ 0.66
TPM1-206ENST00000358278 KLHL34Q8N239 644 aa19.14■□□□□ 0.66
TPM1-206ENST00000358278 CRBNQ96SW2 442 aa19.14■□□□□ 0.66
TPM1-206ENST00000358278 HDAC5Q9UQL6 1122 aa19.14■□□□□ 0.66
TPM1-206ENST00000358278 TAF1P21675 1872 aa19.14■□□□□ 0.65
TPM1-206ENST00000358278 SPEF2Q9C093 1822 aa19.14■□□□□ 0.65
TPM1-206ENST00000358278 ZBTB7BO15156 539 aaPredicted RBP19.14■□□□□ 0.65
TPM1-206ENST00000358278 PPP1R1BQ9UD71 204 aaPredicted RBP19.14■□□□□ 0.65
TPM1-206ENST00000358278 PDE8AO60658 829 aa19.13■□□□□ 0.65
TPM1-206ENST00000358278 BRIP1Q9BX63 1249 aa19.13■□□□□ 0.65
TPM1-206ENST00000358278 SLC10A5Q5PT55 438 aa19.12■□□□□ 0.65
TPM1-206ENST00000358278 SUCLG2Q96I99 432 aa19.12■□□□□ 0.65
TPM1-206ENST00000358278 NLRP3Q96P20 1036 aa19.12■□□□□ 0.65
TPM1-206ENST00000358278 KIAA1551Q9HCM1 1747 aa19.12■□□□□ 0.65
TPM1-206ENST00000358278 GNAI2P04899 355 aa19.11■□□□□ 0.65
TPM1-206ENST00000358278 NEFLP07196 543 aa19.11■□□□□ 0.65
TPM1-206ENST00000358278 PDE6BP35913 854 aa19.11■□□□□ 0.65
TPM1-206ENST00000358278 LRRFIP2Q9Y608 721 aaKnown RBP19.11■□□□□ 0.65
TPM1-206ENST00000358278 CTSWP56202 376 aa19.11■□□□□ 0.65
TPM1-206ENST00000358278 PLA2G12BQ9BX93 195 aa19.11■□□□□ 0.65
TPM1-206ENST00000358278 BRCA1P38398 1863 aaKnown RBP19.1■□□□□ 0.65
TPM1-206ENST00000358278 BICC1Q9H694 974 aaKnown RBP19.1■□□□□ 0.65
TPM1-206ENST00000358278 C1orf115Q9H7X2 142 aa19.1■□□□□ 0.65
TPM1-206ENST00000358278 ZBTB40Q9NUA8 1239 aa19.09■□□□□ 0.65
TPM1-206ENST00000358278 CHMP3Q9Y3E7 222 aa19.09■□□□□ 0.65
TPM1-206ENST00000358278 EPHA10Q5JZY3 1008 aa19.08■□□□□ 0.65
TPM1-206ENST00000358278 C3orf67Q6ZVT6 689 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms