RNA–Protein interactions for RNA: ENST00000358064.3

HIST4H4-201, Transcript of histone cluster 4 H4, humanhuman

TSL 1 (best)

Gene HIST4H4, Length 1,918 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST4H4-201ENST00000358064 ATG3Q9NT62 314 aa13.27□□□□□ -0.29
HIST4H4-201ENST00000358064 TSPYL4Q9UJ04 414 aa13.27□□□□□ -0.29
HIST4H4-201ENST00000358064 CHL1O00533 1208 aa13.26□□□□□ -0.29
HIST4H4-201ENST00000358064 PPP4R3BQ5MIZ7 849 aa13.26□□□□□ -0.29
HIST4H4-201ENST00000358064 PPP1R9BQ96SB3 815 aa13.26□□□□□ -0.29
HIST4H4-201ENST00000358064 IGSF5Q9NSI5 407 aa13.26□□□□□ -0.29
HIST4H4-201ENST00000358064 NUP188Q5SRE5 1749 aa13.26□□□□□ -0.29
HIST4H4-201ENST00000358064 MRC1P22897 1456 aa13.25□□□□□ -0.29
HIST4H4-201ENST00000358064 BTBD11A6QL63 1104 aa13.25□□□□□ -0.29
HIST4H4-201ENST00000358064 PYGBP11216 843 aa13.25□□□□□ -0.29
HIST4H4-201ENST00000358064 MCM5P33992 734 aa13.25□□□□□ -0.29
HIST4H4-201ENST00000358064 AMHR2Q16671 573 aa13.25□□□□□ -0.29
HIST4H4-201ENST00000358064 FTSJ3Q8IY81 847 aaKnown RBP13.25□□□□□ -0.29
HIST4H4-201ENST00000358064 LOC102724428A0A0B4J2F2 783 aa13.24□□□□□ -0.29
HIST4H4-201ENST00000358064 PTCD1O75127 700 aaKnown RBP13.24□□□□□ -0.29
HIST4H4-201ENST00000358064 SIK1P57059 783 aa13.24□□□□□ -0.29
HIST4H4-201ENST00000358064 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
HIST4H4-201ENST00000358064 SIPA1L3O60292 1781 aaPredicted RBP13.24□□□□□ -0.29
HIST4H4-201ENST00000358064 GPR37O15354 613 aa13.23□□□□□ -0.29
HIST4H4-201ENST00000358064 BRD1O95696 1058 aa13.23□□□□□ -0.29
HIST4H4-201ENST00000358064 EXOSC9Q06265 439 aaKnown RBP13.23□□□□□ -0.29
HIST4H4-201ENST00000358064 UPF2Q9HAU5 1272 aaKnown RBP13.23□□□□□ -0.29
HIST4H4-201ENST00000358064 STK32BQ9NY57 414 aa13.23□□□□□ -0.29
HIST4H4-201ENST00000358064 SLC39A6Q13433 755 aa13.23□□□□□ -0.29
HIST4H4-201ENST00000358064 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.23□□□□□ -0.29
HIST4H4-201ENST00000358064 CCDC102AQ96A19 550 aa13.23□□□□□ -0.29
HIST4H4-201ENST00000358064 PANK2Q9BZ23 570 aa13.23□□□□□ -0.29
HIST4H4-201ENST00000358064 BABAM1Q9NWV8 329 aa13.23□□□□□ -0.29
HIST4H4-201ENST00000358064 CHMP5Q9NZZ3 219 aa13.23□□□□□ -0.29
HIST4H4-201ENST00000358064 ERBB4Q15303 1308 aa13.22□□□□□ -0.29
HIST4H4-201ENST00000358064 LY75O60449 1722 aa13.22□□□□□ -0.29
HIST4H4-201ENST00000358064 ZNF500O60304 480 aaPredicted RBP13.22□□□□□ -0.29
HIST4H4-201ENST00000358064 ATP6V1AP38606 617 aa13.22□□□□□ -0.29
HIST4H4-201ENST00000358064 SLC15A2Q16348 729 aa13.22□□□□□ -0.29
HIST4H4-201ENST00000358064 LARP6Q9BRS8 491 aaKnown RBP13.22□□□□□ -0.29
HIST4H4-201ENST00000358064 KCNQ3O43525 872 aa13.21□□□□□ -0.29
HIST4H4-201ENST00000358064 KDM3BQ7LBC6 1761 aa13.21□□□□□ -0.29
HIST4H4-201ENST00000358064 ELL2O00472 640 aaPredicted RBP13.21□□□□□ -0.3
HIST4H4-201ENST00000358064 SLC20A2Q08357 652 aa13.21□□□□□ -0.3
HIST4H4-201ENST00000358064 ZNF827Q17R98 1081 aa13.21□□□□□ -0.3
HIST4H4-201ENST00000358064 KRT24Q2M2I5 525 aa13.21□□□□□ -0.3
HIST4H4-201ENST00000358064 ZNF790Q6PG37 636 aa13.21□□□□□ -0.3
HIST4H4-201ENST00000358064 TTC5Q8N0Z6 440 aa13.21□□□□□ -0.3
HIST4H4-201ENST00000358064 FAM13BQ9NYF5 915 aa13.21□□□□□ -0.3
HIST4H4-201ENST00000358064 TFCP2L1Q9NZI6 479 aa13.21□□□□□ -0.3
HIST4H4-201ENST00000358064 IBTKQ9P2D0 1353 aaPredicted RBP13.2□□□□□ -0.3
HIST4H4-201ENST00000358064 C8orf58Q8NAV2 365 aa13.2□□□□□ -0.3
HIST4H4-201ENST00000358064 ZSCAN20P17040 1043 aaPredicted RBP13.19□□□□□ -0.3
HIST4H4-201ENST00000358064 ITPK1Q13572 414 aa13.19□□□□□ -0.3
HIST4H4-201ENST00000358064 TEX2Q8IWB9 1127 aa13.19□□□□□ -0.3
HIST4H4-201ENST00000358064 TSPYL6Q8N831 410 aa13.19□□□□□ -0.3
HIST4H4-201ENST00000358064 SLC4A9Q96Q91 983 aa13.19□□□□□ -0.3
HIST4H4-201ENST00000358064 CWC22Q9HCG8 908 aaKnown RBP13.19□□□□□ -0.3
HIST4H4-201ENST00000358064 HMGB2P26583 209 aaKnown RBP13.19□□□□□ -0.3
HIST4H4-201ENST00000358064 EIF4A1P60842 406 aaKnown RBP13.19□□□□□ -0.3
HIST4H4-201ENST00000358064 TWISTNBQ3B726 338 aaPredicted RBP13.19□□□□□ -0.3
HIST4H4-201ENST00000358064 AKT1S1Q96B36 256 aa13.19□□□□□ -0.3
HIST4H4-201ENST00000358064 PDGFDQ9GZP0 370 aaPredicted RBP13.19□□□□□ -0.3
HIST4H4-201ENST00000358064 CHMP4BQ9H444 224 aaKnown RBP13.19□□□□□ -0.3
HIST4H4-201ENST00000358064 TMEM51Q9NW97 253 aa13.19□□□□□ -0.3
HIST4H4-201ENST00000358064 PAPPAQ13219 1627 aa13.18□□□□□ -0.3
HIST4H4-201ENST00000358064 SASS6Q6UVJ0 657 aa13.18□□□□□ -0.3
HIST4H4-201ENST00000358064 LINC00116Q8NCU8 138 aa13.18□□□□□ -0.3
HIST4H4-201ENST00000358064 CRBNQ96SW2 442 aa13.18□□□□□ -0.3
HIST4H4-201ENST00000358064 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
HIST4H4-201ENST00000358064 ZHX1Q9UKY1 873 aaPredicted RBP13.17□□□□□ -0.3
HIST4H4-201ENST00000358064 COG6Q9Y2V7 657 aa13.17□□□□□ -0.3
HIST4H4-201ENST00000358064 ZNF330Q9Y3S2 320 aaPredicted RBP13.17□□□□□ -0.3
HIST4H4-201ENST00000358064 UQCRHLA0A096LP55 91 aa13.17□□□□□ -0.3
HIST4H4-201ENST00000358064 UQCRHP07919 91 aa13.17□□□□□ -0.3
HIST4H4-201ENST00000358064 ZNF496Q96IT1 587 aaPredicted RBP13.17□□□□□ -0.3
HIST4H4-201ENST00000358064 C5P01031 1676 aa13.16□□□□□ -0.3
HIST4H4-201ENST00000358064 VAMP4O75379 141 aa13.16□□□□□ -0.3
HIST4H4-201ENST00000358064 CT47B1P0C2W7 299 aaPredicted RBP13.16□□□□□ -0.3
HIST4H4-201ENST00000358064 FMNL2Q96PY5 1086 aa13.16□□□□□ -0.3
HIST4H4-201ENST00000358064 MFSD10Q14728 455 aa13.15□□□□□ -0.3
HIST4H4-201ENST00000358064 RASEFQ8IZ41 740 aa13.15□□□□□ -0.3
HIST4H4-201ENST00000358064 GNPATO15228 680 aa13.15□□□□□ -0.3
HIST4H4-201ENST00000358064 ABCB7O75027 752 aa13.15□□□□□ -0.3
HIST4H4-201ENST00000358064 CAPN15O75808 1086 aa13.15□□□□□ -0.3
HIST4H4-201ENST00000358064 PHF14O94880 888 aa13.15□□□□□ -0.3
HIST4H4-201ENST00000358064 SMIM5Q71RC9 77 aa13.15□□□□□ -0.3
HIST4H4-201ENST00000358064 SND1Q7KZF4 910 aaKnown RBP eCLIP13.15□□□□□ -0.3
HIST4H4-201ENST00000358064 DNAJC10Q8IXB1 793 aa13.15□□□□□ -0.3
HIST4H4-201ENST00000358064 TAF1LQ8IZX4 1826 aa13.15□□□□□ -0.3
HIST4H4-201ENST00000358064 C4BP0C0L5 1744 aa13.14□□□□□ -0.31
HIST4H4-201ENST00000358064 PNPLA7Q6ZV29 1317 aa13.14□□□□□ -0.31
HIST4H4-201ENST00000358064 PRAMEF22A3QJZ6 481 aa13.14□□□□□ -0.31
HIST4H4-201ENST00000358064 GIGYF1O75420 1035 aaPredicted RBP13.14□□□□□ -0.31
HIST4H4-201ENST00000358064 ZBTB7AO95365 584 aa13.14□□□□□ -0.31
HIST4H4-201ENST00000358064 BCL2L13Q9BXK5 485 aa13.14□□□□□ -0.31
HIST4H4-201ENST00000358064 KCPQ6ZWJ8 1503 aa13.14□□□□□ -0.31
HIST4H4-201ENST00000358064 UBR2Q8IWV8 1755 aa13.14□□□□□ -0.31
HIST4H4-201ENST00000358064 HEG1Q9ULI3 1381 aa13.14□□□□□ -0.31
HIST4H4-201ENST00000358064 RARSP54136 660 aaKnown RBP13.13□□□□□ -0.31
HIST4H4-201ENST00000358064 MAP2K5Q13163 448 aa13.13□□□□□ -0.31
HIST4H4-201ENST00000358064 AMIGO3Q86WK7 504 aa13.13□□□□□ -0.31
HIST4H4-201ENST00000358064 NOL7Q9UMY1 257 aaKnown RBP13.13□□□□□ -0.31
HIST4H4-201ENST00000358064 BCAR3O75815 825 aa13.13□□□□□ -0.31
HIST4H4-201ENST00000358064 SNRPA1P09661 255 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms