RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 ZKSCAN1P17029 563 aaPredicted RBP24.5■■□□□ 1.51
COL13A1-202ENST00000357811 MTX1Q13505 466 aa24.5■■□□□ 1.51
COL13A1-202ENST00000357811 EVI5LQ96CN4 794 aa24.5■■□□□ 1.51
COL13A1-202ENST00000357811 NFAT5O94916 1531 aa24.49■■□□□ 1.51
COL13A1-202ENST00000357811 CABLES1Q8TDN4 633 aa24.49■■□□□ 1.51
COL13A1-202ENST00000357811 ARID3AQ99856 593 aa24.49■■□□□ 1.51
COL13A1-202ENST00000357811 IL17RAQ96F46 866 aa24.49■■□□□ 1.51
COL13A1-202ENST00000357811 ATP5J2-PTCD1G3V325 749 aa24.48■■□□□ 1.51
COL13A1-202ENST00000357811 PTCD1O75127 700 aaKnown RBP24.48■■□□□ 1.51
COL13A1-202ENST00000357811 PDIA6Q15084 440 aa24.48■■□□□ 1.51
COL13A1-202ENST00000357811 ZNF589Q86UQ0 364 aaPredicted RBP24.48■■□□□ 1.51
COL13A1-202ENST00000357811 C17orf53Q8N3J3 647 aaPredicted RBP24.48■■□□□ 1.51
COL13A1-202ENST00000357811 MTMR6Q9Y217 621 aa24.48■■□□□ 1.51
COL13A1-202ENST00000357811 DDX58O95786 925 aaKnown RBP24.47■■□□□ 1.51
COL13A1-202ENST00000357811 NECTIN1Q15223 517 aa24.47■■□□□ 1.51
COL13A1-202ENST00000357811 KRT28Q7Z3Y7 464 aa24.47■■□□□ 1.51
COL13A1-202ENST00000357811 ERC1Q8IUD2 1116 aa24.47■■□□□ 1.51
COL13A1-202ENST00000357811 DDX21Q9NR30 783 aaKnown RBP eCLIP24.47■■□□□ 1.51
COL13A1-202ENST00000357811 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.47■■□□□ 1.51
COL13A1-202ENST00000357811 PHF14O94880 888 aa24.46■■□□□ 1.51
COL13A1-202ENST00000357811 CCDC183Q5T5S1 534 aa24.46■■□□□ 1.51
COL13A1-202ENST00000357811 ZNF790Q6PG37 636 aa24.46■■□□□ 1.51
COL13A1-202ENST00000357811 ZSWIM6Q9HCJ5 1215 aa24.46■■□□□ 1.51
COL13A1-202ENST00000357811 CCDC39Q9UFE4 941 aa24.46■■□□□ 1.51
COL13A1-202ENST00000357811 CHMP4AQ9BY43 222 aa24.46■■□□□ 1.51
COL13A1-202ENST00000357811 USP16Q9Y5T5 823 aa24.46■■□□□ 1.51
COL13A1-202ENST00000357811 USP42Q9H9J4 1324 aaKnown RBP24.46■■□□□ 1.51
COL13A1-202ENST00000357811 CSB-PGBD3P0DP91 1061 aa24.45■■□□□ 1.51
COL13A1-202ENST00000357811 VPS53Q5VIR6 699 aa24.45■■□□□ 1.51
COL13A1-202ENST00000357811 RAPGEF4Q8WZA2 1011 aa24.45■■□□□ 1.51
COL13A1-202ENST00000357811 SLC27A2O14975 620 aa24.45■■□□□ 1.5
COL13A1-202ENST00000357811 CHRNA2Q15822 529 aa24.45■■□□□ 1.5
COL13A1-202ENST00000357811 LARP1BQ659C4 914 aaKnown RBP24.45■■□□□ 1.5
COL13A1-202ENST00000357811 ZNF496Q96IT1 587 aaPredicted RBP24.45■■□□□ 1.5
COL13A1-202ENST00000357811 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.45■■□□□ 1.5
COL13A1-202ENST00000357811 UBE2HP62256 183 aa24.45■■□□□ 1.5
COL13A1-202ENST00000357811 PPFIA3O75145 1194 aa24.44■■□□□ 1.5
COL13A1-202ENST00000357811 CAMK4Q16566 473 aa24.44■■□□□ 1.5
COL13A1-202ENST00000357811 CCDC129Q6ZRS4 1044 aa24.44■■□□□ 1.5
COL13A1-202ENST00000357811 CDC37L1Q7L3B6 337 aa24.44■■□□□ 1.5
COL13A1-202ENST00000357811 DNAJC2Q99543 621 aaKnown RBP24.44■■□□□ 1.5
COL13A1-202ENST00000357811 TTC12Q9H892 705 aaPredicted RBP24.44■■□□□ 1.5
COL13A1-202ENST00000357811 NEXNQ0ZGT2 675 aa24.44■■□□□ 1.5
COL13A1-202ENST00000357811 HS1BP3Q53T59 392 aa24.44■■□□□ 1.5
COL13A1-202ENST00000357811 SLFNL1Q499Z3 407 aa24.43■■□□□ 1.5
COL13A1-202ENST00000357811 UBE3BQ7Z3V4 1068 aa24.43■■□□□ 1.5
COL13A1-202ENST00000357811 TFIP11Q9UBB9 837 aaKnown RBP24.43■■□□□ 1.5
COL13A1-202ENST00000357811 EPB41L2O43491 1005 aaKnown RBP24.43■■□□□ 1.5
COL13A1-202ENST00000357811 FAM13BQ9NYF5 915 aa24.43■■□□□ 1.5
COL13A1-202ENST00000357811 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.42■■□□□ 1.5
COL13A1-202ENST00000357811 NEURL1BA8MQ27 555 aa24.42■■□□□ 1.5
COL13A1-202ENST00000357811 ADCY5O95622 1261 aa24.42■■□□□ 1.5
COL13A1-202ENST00000357811 SEC62Q99442 399 aaKnown RBP24.42■■□□□ 1.5
COL13A1-202ENST00000357811 FOSBP53539 338 aa24.42■■□□□ 1.5
COL13A1-202ENST00000357811 LRRC2Q9BYS8 371 aa24.42■■□□□ 1.5
COL13A1-202ENST00000357811 DNTTIP2Q5QJE6 756 aaKnown RBP24.42■■□□□ 1.5
COL13A1-202ENST00000357811 MAP4K1Q92918 833 aa24.42■■□□□ 1.5
COL13A1-202ENST00000357811 MED1Q15648 1581 aaPredicted RBP24.41■■□□□ 1.5
COL13A1-202ENST00000357811 ZNF500O60304 480 aaPredicted RBP24.41■■□□□ 1.5
COL13A1-202ENST00000357811 PROSER2Q86WR7 435 aaPredicted RBP24.41■■□□□ 1.5
COL13A1-202ENST00000357811 GCKRQ14397 625 aa24.41■■□□□ 1.5
COL13A1-202ENST00000357811 BLOC1S2Q6QNY1 142 aa24.41■■□□□ 1.5
COL13A1-202ENST00000357811 TPM2P07951 284 aa24.4■■□□□ 1.5
COL13A1-202ENST00000357811 ATP6V1DQ9Y5K8 247 aa24.4■■□□□ 1.5
COL13A1-202ENST00000357811 KDM3BQ7LBC6 1761 aa24.4■■□□□ 1.5
COL13A1-202ENST00000357811 TFCP2Q12800 502 aa24.4■■□□□ 1.5
COL13A1-202ENST00000357811 LARP1Q6PKG0 1096 aaKnown RBP24.4■■□□□ 1.5
COL13A1-202ENST00000357811 ERBB3P21860 1342 aa24.39■■□□□ 1.49
COL13A1-202ENST00000357811 ADGRL3Q9HAR2 1447 aa24.39■■□□□ 1.49
COL13A1-202ENST00000357811 UQCRHLA0A096LP55 91 aa24.38■■□□□ 1.49
COL13A1-202ENST00000357811 UQCRHP07919 91 aa24.38■■□□□ 1.49
COL13A1-202ENST00000357811 DDX46Q7L014 1031 aaKnown RBP24.38■■□□□ 1.49
COL13A1-202ENST00000357811 TMEM87AQ8NBN3 555 aa24.38■■□□□ 1.49
COL13A1-202ENST00000357811 DDX11Q96FC9 970 aa24.38■■□□□ 1.49
COL13A1-202ENST00000357811 SLC52A2Q9HAB3 445 aa24.38■■□□□ 1.49
COL13A1-202ENST00000357811 DBNLQ9UJU6 430 aaKnown RBP24.38■■□□□ 1.49
COL13A1-202ENST00000357811 ANKRD13DQ6ZTN6 518 aa24.38■■□□□ 1.49
COL13A1-202ENST00000357811 TTC6Q86TZ1 520 aa24.37■■□□□ 1.49
COL13A1-202ENST00000357811 SPC24Q8NBT2 197 aa24.37■■□□□ 1.49
COL13A1-202ENST00000357811 ZSCAN31Q96LW9 406 aaPredicted RBP24.37■■□□□ 1.49
COL13A1-202ENST00000357811 SH2B1Q9NRF2 756 aaPredicted RBP24.37■■□□□ 1.49
COL13A1-202ENST00000357811 N4BP2Q86UW6 1770 aaPredicted RBP24.37■■□□□ 1.49
COL13A1-202ENST00000357811 HEG1Q9ULI3 1381 aa24.36■■□□□ 1.49
COL13A1-202ENST00000357811 JAK2O60674 1132 aa24.36■■□□□ 1.49
COL13A1-202ENST00000357811 CKAP2LQ8IYA6 745 aa24.36■■□□□ 1.49
COL13A1-202ENST00000357811 HDAC5Q9UQL6 1122 aa24.36■■□□□ 1.49
COL13A1-202ENST00000357811 NPHP3Q7Z494 1330 aa24.36■■□□□ 1.49
COL13A1-202ENST00000357811 DBNDD2Q9BQY9 259 aa24.36■■□□□ 1.49
COL13A1-202ENST00000357811 TTC5Q8N0Z6 440 aa24.36■■□□□ 1.49
COL13A1-202ENST00000357811 TM6SF1Q9BZW5 370 aa24.36■■□□□ 1.49
COL13A1-202ENST00000357811 LIG1P18858 919 aa24.35■■□□□ 1.49
COL13A1-202ENST00000357811 AP5Z1O43299 807 aa24.35■■□□□ 1.49
COL13A1-202ENST00000357811 A0A087WZG4 1122 aa24.34■■□□□ 1.49
COL13A1-202ENST00000357811 CEBPZQ03701 1054 aaKnown RBP24.34■■□□□ 1.49
COL13A1-202ENST00000357811 TATP17735 454 aaPredicted RBP24.34■■□□□ 1.49
COL13A1-202ENST00000357811 PSMA5P28066 241 aa24.34■■□□□ 1.49
COL13A1-202ENST00000357811 TOB2Q14106 344 aaPredicted RBP24.34■■□□□ 1.49
COL13A1-202ENST00000357811 METTL22Q9BUU2 404 aaPredicted RBP24.34■■□□□ 1.49
COL13A1-202ENST00000357811 HSP90B1P14625 803 aaKnown RBP24.33■■□□□ 1.49
COL13A1-202ENST00000357811 PHKG2P15735 406 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms