RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 HSP90AA2PQ14568 343 aaPredicted RBP15.48■□□□□ 0.07
RTFDC1-202ENST00000357348 ANKRD45Q5TZF3 282 aa15.48■□□□□ 0.07
RTFDC1-202ENST00000357348 SIRT2Q8IXJ6 389 aa15.48■□□□□ 0.07
RTFDC1-202ENST00000357348 IGKV5-2P06315 115 aa15.48■□□□□ 0.07
RTFDC1-202ENST00000357348 NBPF7P0C2Y1 421 aaPredicted RBP15.48■□□□□ 0.07
RTFDC1-202ENST00000357348 USP44Q9H0E7 712 aa15.48■□□□□ 0.07
RTFDC1-202ENST00000357348 CCDC87Q9NVE4 849 aa15.48■□□□□ 0.07
RTFDC1-202ENST00000357348 AFDNP55196 1824 aaKnown RBP15.47■□□□□ 0.07
RTFDC1-202ENST00000357348 NEXNQ0ZGT2 675 aa15.47■□□□□ 0.07
RTFDC1-202ENST00000357348 PLBD2Q8NHP8 589 aa15.47■□□□□ 0.07
RTFDC1-202ENST00000357348 METTL22Q9BUU2 404 aaPredicted RBP15.47■□□□□ 0.07
RTFDC1-202ENST00000357348 CDC45O75419 566 aa15.47■□□□□ 0.07
RTFDC1-202ENST00000357348 SSFA2P28290 1259 aa15.47■□□□□ 0.07
RTFDC1-202ENST00000357348 C9orf78Q9NZ63 289 aaPredicted RBP15.47■□□□□ 0.07
RTFDC1-202ENST00000357348 CYP2E1P05181 493 aaPredicted RBP15.46■□□□□ 0.07
RTFDC1-202ENST00000357348 ZNF445P59923 1031 aa15.46■□□□□ 0.07
RTFDC1-202ENST00000357348 N4BP2Q86UW6 1770 aaPredicted RBP15.46■□□□□ 0.07
RTFDC1-202ENST00000357348 COL5A3P25940 1745 aaPredicted RBP15.46■□□□□ 0.07
RTFDC1-202ENST00000357348 PXDNLA1KZ92 1463 aa15.46■□□□□ 0.07
RTFDC1-202ENST00000357348 GOLGA6L22H0YM25 854 aa15.45■□□□□ 0.06
RTFDC1-202ENST00000357348 BAG4O95429 457 aaKnown RBP15.45■□□□□ 0.06
RTFDC1-202ENST00000357348 HLFQ16534 295 aa15.45■□□□□ 0.06
RTFDC1-202ENST00000357348 KIF6Q6ZMV9 814 aa15.45■□□□□ 0.06
RTFDC1-202ENST00000357348 LINS1Q8NG48 757 aa15.45■□□□□ 0.06
RTFDC1-202ENST00000357348 LRRC4BQ9NT99 713 aa15.45■□□□□ 0.06
RTFDC1-202ENST00000357348 LRRFIP2Q9Y608 721 aaKnown RBP15.45■□□□□ 0.06
RTFDC1-202ENST00000357348 LY75O60449 1722 aa15.45■□□□□ 0.06
RTFDC1-202ENST00000357348 UBTFL1P0CB47 393 aaPredicted RBP15.45■□□□□ 0.06
RTFDC1-202ENST00000357348 DZIP3Q86Y13 1208 aaKnown RBP15.45■□□□□ 0.06
RTFDC1-202ENST00000357348 NUP188Q5SRE5 1749 aa15.45■□□□□ 0.06
RTFDC1-202ENST00000357348 NEURL1BA8MQ27 555 aa15.44■□□□□ 0.06
RTFDC1-202ENST00000357348 APBA3O96018 575 aa15.44■□□□□ 0.06
RTFDC1-202ENST00000357348 IL6STP40189 918 aaPredicted RBP15.44■□□□□ 0.06
RTFDC1-202ENST00000357348 RABEP1Q15276 862 aa15.44■□□□□ 0.06
RTFDC1-202ENST00000357348 TAF1LQ8IZX4 1826 aa15.43■□□□□ 0.06
RTFDC1-202ENST00000357348 ATP10DQ9P241 1426 aa15.43■□□□□ 0.06
RTFDC1-202ENST00000357348 GNAI2P04899 355 aa15.43■□□□□ 0.06
RTFDC1-202ENST00000357348 GNAI3P08754 354 aa15.43■□□□□ 0.06
RTFDC1-202ENST00000357348 GSPT1P15170 499 aaKnown RBP15.43■□□□□ 0.06
RTFDC1-202ENST00000357348 GPTP24298 496 aa15.43■□□□□ 0.06
RTFDC1-202ENST00000357348 NASPP49321 788 aaPredicted RBP15.43■□□□□ 0.06
RTFDC1-202ENST00000357348 TERF1P54274 439 aa15.43■□□□□ 0.06
RTFDC1-202ENST00000357348 EIF5P55010 431 aaKnown RBP15.43■□□□□ 0.06
RTFDC1-202ENST00000357348 HS1BP3Q53T59 392 aa15.43■□□□□ 0.06
RTFDC1-202ENST00000357348 ZSCAN30Q86W11 494 aa15.43■□□□□ 0.06
RTFDC1-202ENST00000357348 GNPATO15228 680 aa15.43■□□□□ 0.06
RTFDC1-202ENST00000357348 PHF14O94880 888 aa15.43■□□□□ 0.06
RTFDC1-202ENST00000357348 AMIGO3Q86WK7 504 aa15.43■□□□□ 0.06
RTFDC1-202ENST00000357348 NUCB2P80303 420 aa15.42■□□□□ 0.06
RTFDC1-202ENST00000357348 GCKRQ14397 625 aa15.42■□□□□ 0.06
RTFDC1-202ENST00000357348 CEP85Q6P2H3 762 aa15.42■□□□□ 0.06
RTFDC1-202ENST00000357348 MAP3K15Q6ZN16 1313 aa15.42■□□□□ 0.06
RTFDC1-202ENST00000357348 NUP98P52948 1817 aa15.42■□□□□ 0.06
RTFDC1-202ENST00000357348 GRM8O00222 908 aa15.41■□□□□ 0.06
RTFDC1-202ENST00000357348 ALDH1L1O75891 902 aa15.41■□□□□ 0.06
RTFDC1-202ENST00000357348 PLEKHM2Q8IWE5 1019 aa15.41■□□□□ 0.06
RTFDC1-202ENST00000357348 A0A087WZG4 1122 aa15.41■□□□□ 0.06
RTFDC1-202ENST00000357348 APBB1O00213 710 aa15.41■□□□□ 0.06
RTFDC1-202ENST00000357348 OFD1O75665 1012 aa15.41■□□□□ 0.06
RTFDC1-202ENST00000357348 UBE3BQ7Z3V4 1068 aa15.41■□□□□ 0.06
RTFDC1-202ENST00000357348 DCTPP1Q9H773 170 aa15.41■□□□□ 0.06
RTFDC1-202ENST00000357348 COL15A1P39059 1388 aa15.4■□□□□ 0.06
RTFDC1-202ENST00000357348 PNMA6EA0A0J9YXQ4 647 aa15.4■□□□□ 0.06
RTFDC1-202ENST00000357348 FAM177BA6PVY3 158 aa15.4■□□□□ 0.06
RTFDC1-202ENST00000357348 PROM2Q8N271 834 aa15.4■□□□□ 0.06
RTFDC1-202ENST00000357348 FOXD4L1Q9NU39 408 aa15.4■□□□□ 0.06
RTFDC1-202ENST00000357348 DDX49Q9Y6V7 483 aaKnown RBP15.4■□□□□ 0.06
RTFDC1-202ENST00000357348 ZNF831Q5JPB2 1677 aa15.4■□□□□ 0.06
RTFDC1-202ENST00000357348 TXNRD1Q16881 649 aa15.4■□□□□ 0.06
RTFDC1-202ENST00000357348 USP26Q9BXU7 913 aa15.4■□□□□ 0.06
RTFDC1-202ENST00000357348 CICQ96RK0 1608 aaPredicted RBP15.39■□□□□ 0.05
RTFDC1-202ENST00000357348 TCIRG1Q13488 830 aa15.39■□□□□ 0.05
RTFDC1-202ENST00000357348 GIGYF2Q6Y7W6 1299 aaKnown RBP15.39■□□□□ 0.05
RTFDC1-202ENST00000357348 ANKRD44Q8N8A2 993 aa15.39■□□□□ 0.05
RTFDC1-202ENST00000357348 SUCLG2Q96I99 432 aa15.39■□□□□ 0.05
RTFDC1-202ENST00000357348 PDLIM2Q96JY6 352 aa15.39■□□□□ 0.05
RTFDC1-202ENST00000357348 CWC22Q9HCG8 908 aaKnown RBP15.39■□□□□ 0.05
RTFDC1-202ENST00000357348 LMBRD1Q9NUN5 540 aa15.39■□□□□ 0.05
RTFDC1-202ENST00000357348 TTC22Q5TAA0 569 aa15.39■□□□□ 0.05
RTFDC1-202ENST00000357348 C4BP0C0L5 1744 aa15.38■□□□□ 0.05
RTFDC1-202ENST00000357348 AK7Q96M32 723 aa15.38■□□□□ 0.05
RTFDC1-202ENST00000357348 CWC25Q9NXE8 425 aaPredicted RBP15.38■□□□□ 0.05
RTFDC1-202ENST00000357348 SRP68Q9UHB9 627 aaKnown RBP15.38■□□□□ 0.05
RTFDC1-202ENST00000357348 RREB1Q92766 1687 aa15.38■□□□□ 0.05
RTFDC1-202ENST00000357348 CNTNAP4Q9C0A0 1308 aa15.38■□□□□ 0.05
RTFDC1-202ENST00000357348 RPAP2Q8IXW5 612 aaPredicted RBP15.37■□□□□ 0.05
RTFDC1-202ENST00000357348 SYNE4Q8N205 404 aa15.37■□□□□ 0.05
RTFDC1-202ENST00000357348 RTCBQ9Y3I0 505 aaKnown RBP15.37■□□□□ 0.05
RTFDC1-202ENST00000357348 CAMTA2O94983 1202 aa15.37■□□□□ 0.05
RTFDC1-202ENST00000357348 BICDL1Q6ZP65 573 aa15.37■□□□□ 0.05
RTFDC1-202ENST00000357348 PPP1R42Q7Z4L9 355 aa15.37■□□□□ 0.05
RTFDC1-202ENST00000357348 ANP32BQ92688 251 aaKnown RBP15.37■□□□□ 0.05
RTFDC1-202ENST00000357348 FAM89AQ96GI7 184 aa15.37■□□□□ 0.05
RTFDC1-202ENST00000357348 KAZALD1Q96I82 304 aa15.37■□□□□ 0.05
RTFDC1-202ENST00000357348 BICC1Q9H694 974 aaKnown RBP15.37■□□□□ 0.05
RTFDC1-202ENST00000357348 SRGAP3O43295 1099 aa15.36■□□□□ 0.05
RTFDC1-202ENST00000357348 RPS6KA4O75676 772 aa15.36■□□□□ 0.05
RTFDC1-202ENST00000357348 EPHA10Q5JZY3 1008 aa15.36■□□□□ 0.05
RTFDC1-202ENST00000357348 PDCL3Q9H2J4 239 aa15.36■□□□□ 0.05
RTFDC1-202ENST00000357348 ZSCAN23Q3MJ62 389 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms