RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 SMARCA5O60264 1052 aaPredicted RBP22.31■■□□□ 1.16
CDK11A-202ENST00000356937 SURF6O75683 361 aaKnown RBP22.31■■□□□ 1.16
CDK11A-202ENST00000356937 APBA3O96018 575 aa22.31■■□□□ 1.16
CDK11A-202ENST00000356937 RTCBQ9Y3I0 505 aaKnown RBP22.31■■□□□ 1.16
CDK11A-202ENST00000356937 SLC27A3Q5K4L6 730 aa22.3■■□□□ 1.16
CDK11A-202ENST00000356937 FAM89AQ96GI7 184 aa22.3■■□□□ 1.16
CDK11A-202ENST00000356937 C4BP0C0L5 1744 aa22.3■■□□□ 1.16
CDK11A-202ENST00000356937 AK7Q96M32 723 aa22.29■■□□□ 1.16
CDK11A-202ENST00000356937 ZNF34Q8IZ26 560 aa22.29■■□□□ 1.16
CDK11A-202ENST00000356937 AMIGO3Q86WK7 504 aa22.28■■□□□ 1.16
CDK11A-202ENST00000356937 UBN2Q6ZU65 1347 aa22.28■■□□□ 1.16
CDK11A-202ENST00000356937 PCCAP05165 728 aaPredicted RBP22.28■■□□□ 1.16
CDK11A-202ENST00000356937 ZBTB38Q8NAP3 1195 aaPredicted RBP22.28■■□□□ 1.16
CDK11A-202ENST00000356937 PA2G4Q9UQ80 394 aaKnown RBP22.28■■□□□ 1.16
CDK11A-202ENST00000356937 PHF14O94880 888 aa22.27■■□□□ 1.16
CDK11A-202ENST00000356937 TXNRD1Q16881 649 aa22.27■■□□□ 1.16
CDK11A-202ENST00000356937 LMBR1LQ6UX01 489 aa22.27■■□□□ 1.16
CDK11A-202ENST00000356937 SYNE4Q8N205 404 aa22.27■■□□□ 1.16
CDK11A-202ENST00000356937 PROM2Q8N271 834 aa22.27■■□□□ 1.16
CDK11A-202ENST00000356937 TRMT112Q9UI30 125 aaKnown RBP22.27■■□□□ 1.16
CDK11A-202ENST00000356937 ZNF652Q9Y2D9 606 aa22.27■■□□□ 1.16
CDK11A-202ENST00000356937 CHMP3Q9Y3E7 222 aa22.27■■□□□ 1.16
CDK11A-202ENST00000356937 FAM177BA6PVY3 158 aa22.26■■□□□ 1.15
CDK11A-202ENST00000356937 FOXO4P98177 505 aa22.26■■□□□ 1.15
CDK11A-202ENST00000356937 RABL6Q3YEC7 729 aaPredicted RBP22.26■■□□□ 1.15
CDK11A-202ENST00000356937 C16orf71Q8IYS4 520 aaPredicted RBP22.26■■□□□ 1.15
CDK11A-202ENST00000356937 LRRCC1Q9C099 1032 aa22.26■■□□□ 1.15
CDK11A-202ENST00000356937 NIP7Q9Y221 180 aaKnown RBP eCLIP22.26■■□□□ 1.15
CDK11A-202ENST00000356937 SRP68Q9UHB9 627 aaKnown RBP22.26■■□□□ 1.15
CDK11A-202ENST00000356937 BCORQ6W2J9 1755 aa22.25■■□□□ 1.15
CDK11A-202ENST00000356937 OS9Q13438 667 aaPredicted RBP22.25■■□□□ 1.15
CDK11A-202ENST00000356937 USPL1Q5W0Q7 1092 aa22.25■■□□□ 1.15
CDK11A-202ENST00000356937 ARHGEF1Q92888 912 aaKnown RBP22.25■■□□□ 1.15
CDK11A-202ENST00000356937 PLSCR1O15162 318 aa22.24■■□□□ 1.15
CDK11A-202ENST00000356937 ZPR1O75312 459 aa22.24■■□□□ 1.15
CDK11A-202ENST00000356937 CLEC4GQ6UXB4 293 aa22.24■■□□□ 1.15
CDK11A-202ENST00000356937 NARFQ9UHQ1 456 aa22.24■■□□□ 1.15
CDK11A-202ENST00000356937 TRAPPC3LQ5T215 181 aa22.24■■□□□ 1.15
CDK11A-202ENST00000356937 SUSD4Q5VX71 490 aa22.24■■□□□ 1.15
CDK11A-202ENST00000356937 KLHDC4Q8TBB5 520 aa22.24■■□□□ 1.15
CDK11A-202ENST00000356937 RAB11FIP3O75154 756 aa22.23■■□□□ 1.15
CDK11A-202ENST00000356937 NOP58Q9Y2X3 529 aaKnown RBP22.23■■□□□ 1.15
CDK11A-202ENST00000356937 HSP90AB4PQ58FF6 505 aa22.23■■□□□ 1.15
CDK11A-202ENST00000356937 SIL1Q9H173 461 aa22.23■■□□□ 1.15
CDK11A-202ENST00000356937 PARP10Q53GL7 1025 aa22.22■■□□□ 1.15
CDK11A-202ENST00000356937 BICDL1Q6ZP65 573 aa22.22■■□□□ 1.15
CDK11A-202ENST00000356937 RFC4P35249 363 aa22.22■■□□□ 1.15
CDK11A-202ENST00000356937 OTUD7AQ8TE49 926 aaPredicted RBP22.22■■□□□ 1.15
CDK11A-202ENST00000356937 BCL2L12Q9HB09 334 aa22.22■■□□□ 1.15
CDK11A-202ENST00000356937 IL1RAPL2Q9NP60 686 aa22.22■■□□□ 1.15
CDK11A-202ENST00000356937 CDHR2Q9BYE9 1310 aa22.21■■□□□ 1.15
CDK11A-202ENST00000356937 IRS4O14654 1257 aaPredicted RBP22.21■■□□□ 1.15
CDK11A-202ENST00000356937 RHPN1Q8TCX5 695 aa22.21■■□□□ 1.15
CDK11A-202ENST00000356937 UTP14AQ9BVJ6 771 aaKnown RBP22.21■■□□□ 1.15
CDK11A-202ENST00000356937 G3BP1Q13283 466 aaKnown RBP eCLIP22.2■■□□□ 1.15
CDK11A-202ENST00000356937 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.2■■□□□ 1.14
CDK11A-202ENST00000356937 RFX5P48382 616 aaPredicted RBP22.2■■□□□ 1.14
CDK11A-202ENST00000356937 PLEKHM2Q8IWE5 1019 aa22.2■■□□□ 1.14
CDK11A-202ENST00000356937 KIF1BPQ96EK5 621 aa22.2■■□□□ 1.14
CDK11A-202ENST00000356937 CCDC85AQ96PX6 553 aaPredicted RBP22.2■■□□□ 1.14
CDK11A-202ENST00000356937 SCN7AQ01118 1682 aa22.2■■□□□ 1.14
CDK11A-202ENST00000356937 TNS1Q9HBL0 1735 aaKnown RBP22.19■■□□□ 1.14
CDK11A-202ENST00000356937 TBC1D9BQ66K14 1250 aa22.19■■□□□ 1.14
CDK11A-202ENST00000356937 PLA2G12BQ9BX93 195 aa22.19■■□□□ 1.14
CDK11A-202ENST00000356937 PTPN12Q05209 780 aaKnown RBP22.19■■□□□ 1.14
CDK11A-202ENST00000356937 UBR3Q6ZT12 1888 aa22.19■■□□□ 1.14
CDK11A-202ENST00000356937 SH3TC1Q8TE82 1336 aa22.19■■□□□ 1.14
CDK11A-202ENST00000356937 C4AP0C0L4 1744 aa22.18■■□□□ 1.14
CDK11A-202ENST00000356937 ILDR1Q86SU0 546 aaPredicted RBP22.18■■□□□ 1.14
CDK11A-202ENST00000356937 COPRSQ9NQ92 184 aa22.18■■□□□ 1.14
CDK11A-202ENST00000356937 USP42Q9H9J4 1324 aaKnown RBP22.18■■□□□ 1.14
CDK11A-202ENST00000356937 ADRA2BP18089 450 aa22.17■■□□□ 1.14
CDK11A-202ENST00000356937 FAM161AQ3B820 660 aa22.17■■□□□ 1.14
CDK11A-202ENST00000356937 NUTM1Q86Y26 1132 aa22.17■■□□□ 1.14
CDK11A-202ENST00000356937 RGL2O15211 777 aa22.17■■□□□ 1.14
CDK11A-202ENST00000356937 NTSR2O95665 410 aa22.17■■□□□ 1.14
CDK11A-202ENST00000356937 HCLS1P14317 486 aaPredicted RBP22.17■■□□□ 1.14
CDK11A-202ENST00000356937 ERC1Q8IUD2 1116 aa22.17■■□□□ 1.14
CDK11A-202ENST00000356937 PDE8AO60658 829 aa22.16■■□□□ 1.14
CDK11A-202ENST00000356937 HMGB2P26583 209 aaKnown RBP22.16■■□□□ 1.14
CDK11A-202ENST00000356937 BACH2Q9BYV9 841 aa22.16■■□□□ 1.14
CDK11A-202ENST00000356937 CTSWP56202 376 aa22.15■■□□□ 1.14
CDK11A-202ENST00000356937 CCDC57Q2TAC2 916 aa22.15■■□□□ 1.14
CDK11A-202ENST00000356937 SETDB2Q96T68 719 aa22.15■■□□□ 1.14
CDK11A-202ENST00000356937 MYH3P11055 1940 aa22.15■■□□□ 1.14
CDK11A-202ENST00000356937 CSF1RP07333 972 aa22.15■■□□□ 1.14
CDK11A-202ENST00000356937 SSFA2P28290 1259 aa22.15■■□□□ 1.14
CDK11A-202ENST00000356937 C8orf34Q49A92 452 aa22.15■■□□□ 1.14
CDK11A-202ENST00000356937 TTLL11Q8NHH1 800 aa22.15■■□□□ 1.14
CDK11A-202ENST00000356937 ZNF594Q96JF6 807 aaPredicted RBP22.15■■□□□ 1.14
CDK11A-202ENST00000356937 SASH1O94885 1247 aa22.14■■□□□ 1.14
CDK11A-202ENST00000356937 TFCP2L1Q9NZI6 479 aa22.14■■□□□ 1.14
CDK11A-202ENST00000356937 ZNF827Q17R98 1081 aa22.14■■□□□ 1.13
CDK11A-202ENST00000356937 RBM19Q9Y4C8 960 aaKnown RBP22.13■■□□□ 1.13
CDK11A-202ENST00000356937 EN1Q05925 392 aaPredicted RBP22.13■■□□□ 1.13
CDK11A-202ENST00000356937 IFIT5Q13325 482 aaKnown RBP22.13■■□□□ 1.13
CDK11A-202ENST00000356937 CLASRPQ8N2M8 674 aaKnown RBP22.13■■□□□ 1.13
CDK11A-202ENST00000356937 GREM2Q9H772 168 aa22.13■■□□□ 1.13
CDK11A-202ENST00000356937 GTF2E1P29083 439 aaPredicted RBP22.12■■□□□ 1.13
CDK11A-202ENST00000356937 PDE1AP54750 535 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms