RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 RABL6Q3YEC7 729 aaPredicted RBP16.89■□□□□ 0.29
HOXA1-202ENST00000355633 HSP90AB4PQ58FF6 505 aa16.89■□□□□ 0.29
HOXA1-202ENST00000355633 ZBTB38Q8NAP3 1195 aaPredicted RBP16.89■□□□□ 0.29
HOXA1-202ENST00000355633 LRRCC1Q9C099 1032 aa16.89■□□□□ 0.29
HOXA1-202ENST00000355633 RAB11FIP3O75154 756 aa16.88■□□□□ 0.29
HOXA1-202ENST00000355633 SLC27A3Q5K4L6 730 aa16.88■□□□□ 0.29
HOXA1-202ENST00000355633 ZNF34Q8IZ26 560 aa16.88■□□□□ 0.29
HOXA1-202ENST00000355633 LRRC4BQ9NT99 713 aa16.88■□□□□ 0.29
HOXA1-202ENST00000355633 ZNF652Q9Y2D9 606 aa16.88■□□□□ 0.29
HOXA1-202ENST00000355633 RTCBQ9Y3I0 505 aaKnown RBP16.88■□□□□ 0.29
HOXA1-202ENST00000355633 BCL11AQ9H165 835 aa16.87■□□□□ 0.29
HOXA1-202ENST00000355633 FOXO4P98177 505 aa16.87■□□□□ 0.29
HOXA1-202ENST00000355633 FAM89AQ96GI7 184 aa16.87■□□□□ 0.29
HOXA1-202ENST00000355633 NOP58Q9Y2X3 529 aaKnown RBP16.87■□□□□ 0.29
HOXA1-202ENST00000355633 UBN2Q6ZU65 1347 aa16.87■□□□□ 0.29
HOXA1-202ENST00000355633 LMBR1LQ6UX01 489 aa16.86■□□□□ 0.29
HOXA1-202ENST00000355633 AK7Q96M32 723 aa16.86■□□□□ 0.29
HOXA1-202ENST00000355633 SCN7AQ01118 1682 aa16.86■□□□□ 0.29
HOXA1-202ENST00000355633 OS9Q13438 667 aaPredicted RBP16.86■□□□□ 0.29
HOXA1-202ENST00000355633 FAM161AQ3B820 660 aa16.86■□□□□ 0.29
HOXA1-202ENST00000355633 CLEC4GQ6UXB4 293 aa16.86■□□□□ 0.29
HOXA1-202ENST00000355633 PA2G4Q9UQ80 394 aaKnown RBP16.86■□□□□ 0.29
HOXA1-202ENST00000355633 EP400Q96L91 3159 aa16.85■□□□□ 0.29
HOXA1-202ENST00000355633 CDHR2Q9BYE9 1310 aa16.85■□□□□ 0.29
HOXA1-202ENST00000355633 PARP10Q53GL7 1025 aa16.85■□□□□ 0.29
HOXA1-202ENST00000355633 SMIM5Q71RC9 77 aa16.85■□□□□ 0.29
HOXA1-202ENST00000355633 C16orf71Q8IYS4 520 aaPredicted RBP16.85■□□□□ 0.29
HOXA1-202ENST00000355633 KIF1BPQ96EK5 621 aa16.85■□□□□ 0.29
HOXA1-202ENST00000355633 TRMT112Q9UI30 125 aaKnown RBP16.85■□□□□ 0.29
HOXA1-202ENST00000355633 RGL2O15211 777 aa16.84■□□□□ 0.29
HOXA1-202ENST00000355633 RHPN1Q8TCX5 695 aa16.84■□□□□ 0.29
HOXA1-202ENST00000355633 PLA2G12BQ9BX93 195 aa16.84■□□□□ 0.29
HOXA1-202ENST00000355633 BACH2Q9BYV9 841 aa16.84■□□□□ 0.29
HOXA1-202ENST00000355633 NIP7Q9Y221 180 aaKnown RBP eCLIP16.84■□□□□ 0.29
HOXA1-202ENST00000355633 PLSCR1O15162 318 aa16.84■□□□□ 0.29
HOXA1-202ENST00000355633 APBA3O96018 575 aa16.84■□□□□ 0.29
HOXA1-202ENST00000355633 HMGB2P26583 209 aaKnown RBP16.84■□□□□ 0.29
HOXA1-202ENST00000355633 TXNRD1Q16881 649 aa16.84■□□□□ 0.29
HOXA1-202ENST00000355633 ERC1Q8IUD2 1116 aa16.84■□□□□ 0.29
HOXA1-202ENST00000355633 PLEKHM2Q8IWE5 1019 aa16.84■□□□□ 0.29
HOXA1-202ENST00000355633 NARFQ9UHQ1 456 aa16.84■□□□□ 0.29
HOXA1-202ENST00000355633 CHMP3Q9Y3E7 222 aa16.84■□□□□ 0.29
HOXA1-202ENST00000355633 RFX5P48382 616 aaPredicted RBP16.83■□□□□ 0.28
HOXA1-202ENST00000355633 G3BP1Q13283 466 aaKnown RBP eCLIP16.83■□□□□ 0.28
HOXA1-202ENST00000355633 ZPR1O75312 459 aa16.82■□□□□ 0.28
HOXA1-202ENST00000355633 C8orf34Q49A92 452 aa16.82■□□□□ 0.28
HOXA1-202ENST00000355633 SUSD4Q5VX71 490 aa16.82■□□□□ 0.28
HOXA1-202ENST00000355633 OTUD7AQ8TE49 926 aaPredicted RBP16.82■□□□□ 0.28
HOXA1-202ENST00000355633 ARHGEF1Q92888 912 aaKnown RBP16.82■□□□□ 0.28
HOXA1-202ENST00000355633 IL1RAPL2Q9NP60 686 aa16.82■□□□□ 0.28
HOXA1-202ENST00000355633 COPRSQ9NQ92 184 aa16.82■□□□□ 0.28
HOXA1-202ENST00000355633 C4AP0C0L4 1744 aa16.82■□□□□ 0.28
HOXA1-202ENST00000355633 TNS1Q9HBL0 1735 aaKnown RBP16.82■□□□□ 0.28
HOXA1-202ENST00000355633 TRAPPC3LQ5T215 181 aa16.82■□□□□ 0.28
HOXA1-202ENST00000355633 USPL1Q5W0Q7 1092 aa16.82■□□□□ 0.28
HOXA1-202ENST00000355633 AMIGO3Q86WK7 504 aa16.82■□□□□ 0.28
HOXA1-202ENST00000355633 SYNE4Q8N205 404 aa16.82■□□□□ 0.28
HOXA1-202ENST00000355633 KLHDC4Q8TBB5 520 aa16.82■□□□□ 0.28
HOXA1-202ENST00000355633 UTP14AQ9BVJ6 771 aaKnown RBP16.82■□□□□ 0.28
HOXA1-202ENST00000355633 UBR3Q6ZT12 1888 aa16.81■□□□□ 0.28
HOXA1-202ENST00000355633 IRS4O14654 1257 aaPredicted RBP16.81■□□□□ 0.28
HOXA1-202ENST00000355633 PHF14O94880 888 aa16.81■□□□□ 0.28
HOXA1-202ENST00000355633 PTPN12Q05209 780 aaKnown RBP16.81■□□□□ 0.28
HOXA1-202ENST00000355633 PROM2Q8N271 834 aa16.81■□□□□ 0.28
HOXA1-202ENST00000355633 SIL1Q9H173 461 aa16.81■□□□□ 0.28
HOXA1-202ENST00000355633 SRP68Q9UHB9 627 aaKnown RBP16.81■□□□□ 0.28
HOXA1-202ENST00000355633 SH3TC1Q8TE82 1336 aa16.81■□□□□ 0.28
HOXA1-202ENST00000355633 MYH3P11055 1940 aa16.81■□□□□ 0.28
HOXA1-202ENST00000355633 FAM177BA6PVY3 158 aa16.8■□□□□ 0.28
HOXA1-202ENST00000355633 ADRA2BP18089 450 aa16.8■□□□□ 0.28
HOXA1-202ENST00000355633 RFC4P35249 363 aa16.8■□□□□ 0.28
HOXA1-202ENST00000355633 BCL2L12Q9HB09 334 aa16.8■□□□□ 0.28
HOXA1-202ENST00000355633 BMP2KLQ5H9B9 411 aa16.8■□□□□ 0.28
HOXA1-202ENST00000355633 PDE8AO60658 829 aa16.79■□□□□ 0.28
HOXA1-202ENST00000355633 CSF1RP07333 972 aa16.79■□□□□ 0.28
HOXA1-202ENST00000355633 SALL3Q9BXA9 1300 aa16.79■□□□□ 0.28
HOXA1-202ENST00000355633 USP42Q9H9J4 1324 aaKnown RBP16.79■□□□□ 0.28
HOXA1-202ENST00000355633 SASH1O94885 1247 aa16.79■□□□□ 0.28
HOXA1-202ENST00000355633 NTSR2O95665 410 aa16.79■□□□□ 0.28
HOXA1-202ENST00000355633 CCDC57Q2TAC2 916 aa16.79■□□□□ 0.28
HOXA1-202ENST00000355633 TBC1D9BQ66K14 1250 aa16.79■□□□□ 0.28
HOXA1-202ENST00000355633 CLASRPQ8N2M8 674 aaKnown RBP16.79■□□□□ 0.28
HOXA1-202ENST00000355633 OSBPL3Q9H4L5 887 aa16.79■□□□□ 0.28
HOXA1-202ENST00000355633 RBM19Q9Y4C8 960 aaKnown RBP16.79■□□□□ 0.28
HOXA1-202ENST00000355633 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.78■□□□□ 0.28
HOXA1-202ENST00000355633 MX1P20591 662 aa16.78■□□□□ 0.28
HOXA1-202ENST00000355633 SSFA2P28290 1259 aa16.78■□□□□ 0.28
HOXA1-202ENST00000355633 PDE1AP54750 535 aa16.78■□□□□ 0.28
HOXA1-202ENST00000355633 CTSWP56202 376 aa16.78■□□□□ 0.28
HOXA1-202ENST00000355633 RGPD3A6NKT7 1758 aaPredicted RBP16.78■□□□□ 0.28
HOXA1-202ENST00000355633 RGPD4Q7Z3J3 1758 aa16.78■□□□□ 0.28
HOXA1-202ENST00000355633 TTC22Q5TAA0 569 aa16.77■□□□□ 0.28
HOXA1-202ENST00000355633 BICDL1Q6ZP65 573 aa16.77■□□□□ 0.28
HOXA1-202ENST00000355633 LAMB2P55268 1798 aa16.77■□□□□ 0.28
HOXA1-202ENST00000355633 HSP90B1P14625 803 aaKnown RBP16.77■□□□□ 0.27
HOXA1-202ENST00000355633 NUTM1Q86Y26 1132 aa16.77■□□□□ 0.27
HOXA1-202ENST00000355633 TTLL11Q8NHH1 800 aa16.77■□□□□ 0.27
HOXA1-202ENST00000355633 CCDC85AQ96PX6 553 aaPredicted RBP16.77■□□□□ 0.27
HOXA1-202ENST00000355633 DDX60Q8IY21 1712 aaKnown RBP16.76■□□□□ 0.27
HOXA1-202ENST00000355633 GSPT1P15170 499 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms