RNA–Protein interactions for RNA: ENST00000355422.10

GFRA1-201, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GFRA1, Length 2,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-201ENST00000355422 ALDH1L1O75891 902 aa17.32■□□□□ 0.36
GFRA1-201ENST00000355422 LRRC59Q96AG4 307 aaKnown RBP17.32■□□□□ 0.36
GFRA1-201ENST00000355422 TCEANC2Q96MN5 208 aa17.32■□□□□ 0.36
GFRA1-201ENST00000355422 CCDC8Q9H0W5 538 aaPredicted RBP17.32■□□□□ 0.36
GFRA1-201ENST00000355422 SLC27A2O14975 620 aa17.31■□□□□ 0.36
GFRA1-201ENST00000355422 SASH1O94885 1247 aa17.31■□□□□ 0.36
GFRA1-201ENST00000355422 KRT85P78386 507 aa17.31■□□□□ 0.36
GFRA1-201ENST00000355422 CAMK4Q16566 473 aa17.31■□□□□ 0.36
GFRA1-201ENST00000355422 AKAP4Q5JQC9 854 aa17.31■□□□□ 0.36
GFRA1-201ENST00000355422 KSR2Q6VAB6 950 aa17.31■□□□□ 0.36
GFRA1-201ENST00000355422 EAF2Q96CJ1 260 aaPredicted RBP17.31■□□□□ 0.36
GFRA1-201ENST00000355422 PYCARDQ9ULZ3 195 aa17.31■□□□□ 0.36
GFRA1-201ENST00000355422 PRAMEF22A3QJZ6 481 aa17.31■□□□□ 0.36
GFRA1-201ENST00000355422 KLHL34Q8N239 644 aa17.31■□□□□ 0.36
GFRA1-201ENST00000355422 FAM177BA6PVY3 158 aa17.3■□□□□ 0.36
GFRA1-201ENST00000355422 LIG1P18858 919 aa17.3■□□□□ 0.36
GFRA1-201ENST00000355422 KIAA1524Q8TCG1 905 aa17.3■□□□□ 0.36
GFRA1-201ENST00000355422 KDM3BQ7LBC6 1761 aa17.3■□□□□ 0.36
GFRA1-201ENST00000355422 ARHGAP23Q9P227 1491 aa17.3■□□□□ 0.36
GFRA1-201ENST00000355422 GTF2F1P35269 517 aaKnown RBP eCLIP17.3■□□□□ 0.36
GFRA1-201ENST00000355422 ZNF710Q8N1W2 664 aa17.3■□□□□ 0.36
GFRA1-201ENST00000355422 SUCLG2Q96I99 432 aa17.3■□□□□ 0.36
GFRA1-201ENST00000355422 TLR7Q9NYK1 1049 aaKnown RBP17.3■□□□□ 0.36
GFRA1-201ENST00000355422 SLIT1O75093 1534 aa17.29■□□□□ 0.36
GFRA1-201ENST00000355422 A0A0D9SFI3 127 aa17.29■□□□□ 0.36
GFRA1-201ENST00000355422 PSMA5P28066 241 aa17.29■□□□□ 0.36
GFRA1-201ENST00000355422 KAZALD1Q96I82 304 aa17.29■□□□□ 0.36
GFRA1-201ENST00000355422 BOLA2Q9H3K6 86 aa17.29■□□□□ 0.36
GFRA1-201ENST00000355422 TAF6LQ9Y6J9 622 aa17.29■□□□□ 0.36
GFRA1-201ENST00000355422 GIGYF1O75420 1035 aaPredicted RBP17.29■□□□□ 0.36
GFRA1-201ENST00000355422 G3BP1Q13283 466 aaKnown RBP eCLIP17.29■□□□□ 0.36
GFRA1-201ENST00000355422 NUP62CLQ9H1M0 184 aa17.29■□□□□ 0.36
GFRA1-201ENST00000355422 RNMTO43148 476 aaKnown RBP17.28■□□□□ 0.36
GFRA1-201ENST00000355422 MAP3K11Q16584 847 aa17.28■□□□□ 0.36
GFRA1-201ENST00000355422 PLEKHO1Q53GL0 409 aaPredicted RBP17.28■□□□□ 0.36
GFRA1-201ENST00000355422 BICC1Q9H694 974 aaKnown RBP17.28■□□□□ 0.36
GFRA1-201ENST00000355422 PHF8Q9UPP1 1060 aa17.28■□□□□ 0.36
GFRA1-201ENST00000355422 HIP1O00291 1037 aa17.28■□□□□ 0.36
GFRA1-201ENST00000355422 BLOC1S2Q6QNY1 142 aa17.28■□□□□ 0.36
GFRA1-201ENST00000355422 FAM200AQ8TCP9 573 aa17.28■□□□□ 0.36
GFRA1-201ENST00000355422 MRVI1Q9Y6F6 885 aa17.28■□□□□ 0.36
GFRA1-201ENST00000355422 SETD1BQ9UPS6 1966 aaKnown RBP17.27■□□□□ 0.36
GFRA1-201ENST00000355422 GRM8O00222 908 aa17.27■□□□□ 0.36
GFRA1-201ENST00000355422 TYRO3Q06418 890 aa17.27■□□□□ 0.36
GFRA1-201ENST00000355422 CKAP2LQ8IYA6 745 aa17.27■□□□□ 0.36
GFRA1-201ENST00000355422 FSD1Q9BTV5 496 aa17.27■□□□□ 0.36
GFRA1-201ENST00000355422 SIL1Q9H173 461 aa17.27■□□□□ 0.36
GFRA1-201ENST00000355422 TFIP11Q9UBB9 837 aaKnown RBP17.27■□□□□ 0.36
GFRA1-201ENST00000355422 HDAC5Q9UQL6 1122 aa17.27■□□□□ 0.36
GFRA1-201ENST00000355422 PDCP20941 246 aa17.27■□□□□ 0.35
GFRA1-201ENST00000355422 AIMP1Q12904 312 aaKnown RBP17.27■□□□□ 0.35
GFRA1-201ENST00000355422 STK3Q13188 491 aa17.27■□□□□ 0.35
GFRA1-201ENST00000355422 LUZP1Q86V48 1076 aa17.27■□□□□ 0.35
GFRA1-201ENST00000355422 THEMISQ8N1K5 641 aaPredicted RBP17.27■□□□□ 0.35
GFRA1-201ENST00000355422 CCDC94Q9BW85 323 aaPredicted RBP17.27■□□□□ 0.35
GFRA1-201ENST00000355422 KIF3AQ9Y496 699 aa17.27■□□□□ 0.35
GFRA1-201ENST00000355422 LTN1O94822 1766 aa17.26■□□□□ 0.35
GFRA1-201ENST00000355422 ELP1O95163 1332 aa17.26■□□□□ 0.35
GFRA1-201ENST00000355422 USP54Q70EL1 1684 aa17.26■□□□□ 0.35
GFRA1-201ENST00000355422 TPM3P06753 285 aa17.26■□□□□ 0.35
GFRA1-201ENST00000355422 RPS6KB1P23443 525 aa17.26■□□□□ 0.35
GFRA1-201ENST00000355422 LARP1Q6PKG0 1096 aaKnown RBP17.26■□□□□ 0.35
GFRA1-201ENST00000355422 DACT1Q9NYF0 836 aa17.26■□□□□ 0.35
GFRA1-201ENST00000355422 GOLGA6L6A8MZA4 724 aa17.26■□□□□ 0.35
GFRA1-201ENST00000355422 TOB2Q14106 344 aaPredicted RBP17.26■□□□□ 0.35
GFRA1-201ENST00000355422 LINS1Q8NG48 757 aa17.26■□□□□ 0.35
GFRA1-201ENST00000355422 KLHDC4Q8TBB5 520 aa17.26■□□□□ 0.35
GFRA1-201ENST00000355422 SNRKQ9NRH2 765 aa17.26■□□□□ 0.35
GFRA1-201ENST00000355422 ANKRD1Q15327 319 aa17.25■□□□□ 0.35
GFRA1-201ENST00000355422 C1orf141Q5JVX7 400 aa17.25■□□□□ 0.35
GFRA1-201ENST00000355422 RNF20Q5VTR2 975 aa17.25■□□□□ 0.35
GFRA1-201ENST00000355422 ZNF589Q86UQ0 364 aaPredicted RBP17.25■□□□□ 0.35
GFRA1-201ENST00000355422 TNMDQ9H2S6 317 aa17.25■□□□□ 0.35
GFRA1-201ENST00000355422 NPHP4O75161 1426 aaPredicted RBP17.25■□□□□ 0.35
GFRA1-201ENST00000355422 GOLGA6L4A6NEF3 574 aa17.25■□□□□ 0.35
GFRA1-201ENST00000355422 PDIA4P13667 645 aaKnown RBP17.25■□□□□ 0.35
GFRA1-201ENST00000355422 SPATA32Q96LK8 384 aa17.25■□□□□ 0.35
GFRA1-201ENST00000355422 PTGS1P23219 599 aa17.24■□□□□ 0.35
GFRA1-201ENST00000355422 RBM33Q96EV2 1170 aaKnown RBP17.24■□□□□ 0.35
GFRA1-201ENST00000355422 ANO6Q4KMQ2 910 aa17.24■□□□□ 0.35
GFRA1-201ENST00000355422 SCAND2PQ9GZW5 306 aaPredicted RBP17.24■□□□□ 0.35
GFRA1-201ENST00000355422 PXDNQ92626 1479 aa17.23■□□□□ 0.35
GFRA1-201ENST00000355422 AMOTQ4VCS5 1084 aa17.23■□□□□ 0.35
GFRA1-201ENST00000355422 EDC3Q96F86 508 aaKnown RBP17.23■□□□□ 0.35
GFRA1-201ENST00000355422 BCL2L12Q9HB09 334 aa17.23■□□□□ 0.35
GFRA1-201ENST00000355422 CBX8Q9HC52 389 aa17.23■□□□□ 0.35
GFRA1-201ENST00000355422 LEO1Q8WVC0 666 aaPredicted RBP17.23■□□□□ 0.35
GFRA1-201ENST00000355422 NFAT5O94916 1531 aa17.23■□□□□ 0.35
GFRA1-201ENST00000355422 UTYO14607 1347 aa17.22■□□□□ 0.35
GFRA1-201ENST00000355422 HEG1Q9ULI3 1381 aa17.22■□□□□ 0.35
GFRA1-201ENST00000355422 MED23Q9ULK4 1368 aa17.22■□□□□ 0.35
GFRA1-201ENST00000355422 ALDH8A1Q9H2A2 487 aaPredicted RBP17.22■□□□□ 0.35
GFRA1-201ENST00000355422 RIOK3O14730 519 aaKnown RBP17.22■□□□□ 0.35
GFRA1-201ENST00000355422 PSME1Q06323 249 aa17.22■□□□□ 0.35
GFRA1-201ENST00000355422 SMAP1Q8IYB5 467 aaPredicted RBP17.22■□□□□ 0.35
GFRA1-201ENST00000355422 PRDM10Q9NQV6 1147 aa17.22■□□□□ 0.35
GFRA1-201ENST00000355422 PRDM4Q9UKN5 801 aa17.22■□□□□ 0.35
GFRA1-201ENST00000355422 RGPD2P0DJD1 1756 aa17.21■□□□□ 0.35
GFRA1-201ENST00000355422 KIF13AQ9H1H9 1805 aa17.21■□□□□ 0.35
GFRA1-201ENST00000355422 LMO7Q8WWI1 1683 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms