RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 PCCAP05165 728 aaPredicted RBP11.95□□□□□ -0.5
NPHP1-202ENST00000355301 RGS3P49796 1198 aa11.95□□□□□ -0.5
NPHP1-202ENST00000355301 TXNRD1Q16881 649 aa11.95□□□□□ -0.5
NPHP1-202ENST00000355301 EPHA10Q5JZY3 1008 aa11.95□□□□□ -0.5
NPHP1-202ENST00000355301 PROM2Q8N271 834 aa11.95□□□□□ -0.5
NPHP1-202ENST00000355301 ZBTB38Q8NAP3 1195 aaPredicted RBP11.95□□□□□ -0.5
NPHP1-202ENST00000355301 ZNF652Q9Y2D9 606 aa11.95□□□□□ -0.5
NPHP1-202ENST00000355301 UBN2Q6ZU65 1347 aa11.94□□□□□ -0.5
NPHP1-202ENST00000355301 APBA3O96018 575 aa11.94□□□□□ -0.5
NPHP1-202ENST00000355301 GPTP24298 496 aa11.94□□□□□ -0.5
NPHP1-202ENST00000355301 JARID2Q92833 1246 aaPredicted RBP11.94□□□□□ -0.5
NPHP1-202ENST00000355301 UBR3Q6ZT12 1888 aa11.94□□□□□ -0.5
NPHP1-202ENST00000355301 AK7Q96M32 723 aa11.94□□□□□ -0.5
NPHP1-202ENST00000355301 LNPKQ9C0E8 428 aa11.94□□□□□ -0.5
NPHP1-202ENST00000355301 NARFQ9UHQ1 456 aa11.94□□□□□ -0.5
NPHP1-202ENST00000355301 EXOC6BQ9Y2D4 811 aa11.94□□□□□ -0.5
NPHP1-202ENST00000355301 CDHR2Q9BYE9 1310 aa11.93□□□□□ -0.5
NPHP1-202ENST00000355301 C4AP0C0L4 1744 aa11.93□□□□□ -0.5
NPHP1-202ENST00000355301 ADRA2BP18089 450 aa11.93□□□□□ -0.5
NPHP1-202ENST00000355301 PDE4AP27815 886 aa11.93□□□□□ -0.5
NPHP1-202ENST00000355301 FOXO4P98177 505 aa11.93□□□□□ -0.5
NPHP1-202ENST00000355301 PARP10Q53GL7 1025 aa11.93□□□□□ -0.5
NPHP1-202ENST00000355301 AMIGO3Q86WK7 504 aa11.93□□□□□ -0.5
NPHP1-202ENST00000355301 PLA2G12BQ9BX93 195 aa11.93□□□□□ -0.5
NPHP1-202ENST00000355301 NOP58Q9Y2X3 529 aaKnown RBP11.93□□□□□ -0.5
NPHP1-202ENST00000355301 SURF6O75683 361 aaKnown RBP11.92□□□□□ -0.5
NPHP1-202ENST00000355301 RTL5Q5HYW3 569 aaPredicted RBP11.92□□□□□ -0.5
NPHP1-202ENST00000355301 ARHGEF1Q92888 912 aaKnown RBP11.92□□□□□ -0.5
NPHP1-202ENST00000355301 FAM89AQ96GI7 184 aa11.92□□□□□ -0.5
NPHP1-202ENST00000355301 RAB11FIP3O75154 756 aa11.92□□□□□ -0.5
NPHP1-202ENST00000355301 HSP90AB4PQ58FF6 505 aa11.92□□□□□ -0.5
NPHP1-202ENST00000355301 TRAPPC3LQ5T215 181 aa11.92□□□□□ -0.5
NPHP1-202ENST00000355301 SMIM5Q71RC9 77 aa11.92□□□□□ -0.5
NPHP1-202ENST00000355301 BCL2L12Q9HB09 334 aa11.92□□□□□ -0.5
NPHP1-202ENST00000355301 TRMT112Q9UI30 125 aaKnown RBP11.92□□□□□ -0.5
NPHP1-202ENST00000355301 ZPR1O75312 459 aa11.91□□□□□ -0.5
NPHP1-202ENST00000355301 SSFA2P28290 1259 aa11.91□□□□□ -0.5
NPHP1-202ENST00000355301 LMBR1LQ6UX01 489 aa11.91□□□□□ -0.5
NPHP1-202ENST00000355301 ILDR1Q86SU0 546 aaPredicted RBP11.91□□□□□ -0.5
NPHP1-202ENST00000355301 LRRCC1Q9C099 1032 aa11.91□□□□□ -0.5
NPHP1-202ENST00000355301 ZBTB47Q9UFB7 747 aaPredicted RBP11.91□□□□□ -0.5
NPHP1-202ENST00000355301 NIP7Q9Y221 180 aaKnown RBP eCLIP11.91□□□□□ -0.5
NPHP1-202ENST00000355301 USP42Q9H9J4 1324 aaKnown RBP11.91□□□□□ -0.5
NPHP1-202ENST00000355301 RFC4P35249 363 aa11.9□□□□□ -0.5
NPHP1-202ENST00000355301 RFX5P48382 616 aaPredicted RBP11.9□□□□□ -0.5
NPHP1-202ENST00000355301 SUSD4Q5VX71 490 aa11.9□□□□□ -0.5
NPHP1-202ENST00000355301 USPL1Q5W0Q7 1092 aa11.9□□□□□ -0.5
NPHP1-202ENST00000355301 COPRSQ9NQ92 184 aa11.9□□□□□ -0.5
NPHP1-202ENST00000355301 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.9□□□□□ -0.51
NPHP1-202ENST00000355301 APBB1O00213 710 aa11.9□□□□□ -0.51
NPHP1-202ENST00000355301 UTP14AQ9BVJ6 771 aaKnown RBP11.9□□□□□ -0.51
NPHP1-202ENST00000355301 SRP68Q9UHB9 627 aaKnown RBP11.9□□□□□ -0.51
NPHP1-202ENST00000355301 SH3TC1Q8TE82 1336 aa11.89□□□□□ -0.51
NPHP1-202ENST00000355301 IRS4O14654 1257 aaPredicted RBP11.89□□□□□ -0.51
NPHP1-202ENST00000355301 SMARCA5O60264 1052 aaPredicted RBP11.89□□□□□ -0.51
NPHP1-202ENST00000355301 PHF14O94880 888 aa11.89□□□□□ -0.51
NPHP1-202ENST00000355301 NTSR2O95665 410 aa11.89□□□□□ -0.51
NPHP1-202ENST00000355301 CSF1RP07333 972 aa11.89□□□□□ -0.51
NPHP1-202ENST00000355301 PTPN12Q05209 780 aaKnown RBP11.89□□□□□ -0.51
NPHP1-202ENST00000355301 SYNE4Q8N205 404 aa11.89□□□□□ -0.51
NPHP1-202ENST00000355301 KIF1BPQ96EK5 621 aa11.89□□□□□ -0.51
NPHP1-202ENST00000355301 PA2G4Q9UQ80 394 aaKnown RBP11.89□□□□□ -0.51
NPHP1-202ENST00000355301 MYH3P11055 1940 aa11.89□□□□□ -0.51
NPHP1-202ENST00000355301 COL24A1Q17RW2 1714 aa11.89□□□□□ -0.51
NPHP1-202ENST00000355301 TBC1D9BQ66K14 1250 aa11.88□□□□□ -0.51
NPHP1-202ENST00000355301 ERC1Q8IUD2 1116 aa11.88□□□□□ -0.51
NPHP1-202ENST00000355301 RHPN1Q8TCX5 695 aa11.88□□□□□ -0.51
NPHP1-202ENST00000355301 LAMB2P55268 1798 aa11.88□□□□□ -0.51
NPHP1-202ENST00000355301 PDE8AO60658 829 aa11.88□□□□□ -0.51
NPHP1-202ENST00000355301 PLEKHM2Q8IWE5 1019 aa11.88□□□□□ -0.51
NPHP1-202ENST00000355301 C16orf71Q8IYS4 520 aaPredicted RBP11.88□□□□□ -0.51
NPHP1-202ENST00000355301 KLHDC4Q8TBB5 520 aa11.88□□□□□ -0.51
NPHP1-202ENST00000355301 AKT1S1Q96B36 256 aa11.88□□□□□ -0.51
NPHP1-202ENST00000355301 DDX60Q8IY21 1712 aaKnown RBP11.87□□□□□ -0.51
NPHP1-202ENST00000355301 HSP90B1P14625 803 aaKnown RBP11.87□□□□□ -0.51
NPHP1-202ENST00000355301 CTSWP56202 376 aa11.87□□□□□ -0.51
NPHP1-202ENST00000355301 G3BP1Q13283 466 aaKnown RBP eCLIP11.87□□□□□ -0.51
NPHP1-202ENST00000355301 TTLL11Q8NHH1 800 aa11.87□□□□□ -0.51
NPHP1-202ENST00000355301 SETDB2Q96T68 719 aa11.87□□□□□ -0.51
NPHP1-202ENST00000355301 CHMP3Q9Y3E7 222 aa11.87□□□□□ -0.51
NPHP1-202ENST00000355301 OS9Q13438 667 aaPredicted RBP11.86□□□□□ -0.51
NPHP1-202ENST00000355301 ZNF827Q17R98 1081 aa11.86□□□□□ -0.51
NPHP1-202ENST00000355301 CAMKK2Q96RR4 588 aa11.86□□□□□ -0.51
NPHP1-202ENST00000355301 SALL3Q9BXA9 1300 aa11.86□□□□□ -0.51
NPHP1-202ENST00000355301 FAM177BA6PVY3 158 aa11.86□□□□□ -0.51
NPHP1-202ENST00000355301 SASH1O94885 1247 aa11.86□□□□□ -0.51
NPHP1-202ENST00000355301 CCDC57Q2TAC2 916 aa11.86□□□□□ -0.51
NPHP1-202ENST00000355301 OTUD7AQ8TE49 926 aaPredicted RBP11.86□□□□□ -0.51
NPHP1-202ENST00000355301 NYXQ9GZU5 481 aa11.86□□□□□ -0.51
NPHP1-202ENST00000355301 SIL1Q9H173 461 aa11.86□□□□□ -0.51
NPHP1-202ENST00000355301 OSBPL3Q9H4L5 887 aa11.86□□□□□ -0.51
NPHP1-202ENST00000355301 IL1RAPL2Q9NP60 686 aa11.86□□□□□ -0.51
NPHP1-202ENST00000355301 TFCP2L1Q9NZI6 479 aa11.86□□□□□ -0.51
NPHP1-202ENST00000355301 TUBGCP6Q96RT7 1819 aa11.85□□□□□ -0.51
NPHP1-202ENST00000355301 GYS1P13807 737 aa11.85□□□□□ -0.51
NPHP1-202ENST00000355301 FAM161AQ3B820 660 aa11.85□□□□□ -0.51
NPHP1-202ENST00000355301 BMP2KLQ5H9B9 411 aa11.85□□□□□ -0.51
NPHP1-202ENST00000355301 BICDL1Q6ZP65 573 aa11.85□□□□□ -0.51
NPHP1-202ENST00000355301 FBXO3Q9UK99 471 aa11.85□□□□□ -0.51
NPHP1-202ENST00000355301 HCLS1P14317 486 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms