RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 C19orf44Q9H6X5 657 aa11.14□□□□□ -0.63
SMG6-202ENST00000354901 SGSM2O43147 1006 aa11.14□□□□□ -0.63
SMG6-202ENST00000354901 CASTP20810 708 aaKnown RBP11.14□□□□□ -0.63
SMG6-202ENST00000354901 ANAPC15P60006 121 aa11.14□□□□□ -0.63
SMG6-202ENST00000354901 NCBP1Q09161 790 aaKnown RBP11.14□□□□□ -0.63
SMG6-202ENST00000354901 CUL4AQ13619 759 aa11.14□□□□□ -0.63
SMG6-202ENST00000354901 PROSER2Q86WR7 435 aaPredicted RBP11.14□□□□□ -0.63
SMG6-202ENST00000354901 KCNH5Q8NCM2 988 aa11.14□□□□□ -0.63
SMG6-202ENST00000354901 SNX14Q9Y5W7 946 aa11.14□□□□□ -0.63
SMG6-202ENST00000354901 TRPM3Q9HCF6 1732 aaPredicted RBP11.13□□□□□ -0.63
SMG6-202ENST00000354901 RAB11FIP3O75154 756 aa11.13□□□□□ -0.63
SMG6-202ENST00000354901 HSPA4P34932 840 aa11.13□□□□□ -0.63
SMG6-202ENST00000354901 AK2P54819 239 aa11.13□□□□□ -0.63
SMG6-202ENST00000354901 CLASRPQ8N2M8 674 aaKnown RBP11.13□□□□□ -0.63
SMG6-202ENST00000354901 RGS22Q8NE09 1264 aa11.13□□□□□ -0.63
SMG6-202ENST00000354901 ORAI2Q96SN7 254 aa11.13□□□□□ -0.63
SMG6-202ENST00000354901 SLIT3O75094 1523 aa11.13□□□□□ -0.63
SMG6-202ENST00000354901 PIP4K2AP48426 406 aaPredicted RBP11.13□□□□□ -0.63
SMG6-202ENST00000354901 USP48Q86UV5 1035 aa11.13□□□□□ -0.63
SMG6-202ENST00000354901 SYAP1Q96A49 352 aaPredicted RBP11.13□□□□□ -0.63
SMG6-202ENST00000354901 FIBPO43427 364 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 IFIT2P09913 472 aaKnown RBP11.12□□□□□ -0.63
SMG6-202ENST00000354901 SLC39A6Q13433 755 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 POLA2Q14181 598 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 PRPF40BQ6NWY9 871 aaKnown RBP11.12□□□□□ -0.63
SMG6-202ENST00000354901 CNPY4Q8N129 248 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 CCDC8Q9H0W5 538 aaPredicted RBP11.12□□□□□ -0.63
SMG6-202ENST00000354901 CALCOCO1Q9P1Z2 691 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 CNPY2Q9Y2B0 182 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 PLEKHO1Q53GL0 409 aaPredicted RBP11.12□□□□□ -0.63
SMG6-202ENST00000354901 AACSQ86V21 672 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 CCDC83Q8IWF9 413 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 KLHDC4Q8TBB5 520 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 GTF3C6Q969F1 213 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 TCEANC2Q96MN5 208 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 FEZ1Q99689 392 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 NFAT5O94916 1531 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 MBD3O95983 291 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 MYL6BP14649 208 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 PTH1RQ03431 593 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 TERF2Q15554 542 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 JAKMIP1Q96N16 626 aaKnown RBP11.12□□□□□ -0.63
SMG6-202ENST00000354901 CCDC9Q9Y3X0 531 aaKnown RBP11.12□□□□□ -0.63
SMG6-202ENST00000354901 C1orf167Q5SNV9 1468 aa11.12□□□□□ -0.63
SMG6-202ENST00000354901 RAD50Q92878 1312 aa11.11□□□□□ -0.63
SMG6-202ENST00000354901 POLR3GO15318 223 aaPredicted RBP11.11□□□□□ -0.63
SMG6-202ENST00000354901 LARGE1O95461 756 aa11.11□□□□□ -0.63
SMG6-202ENST00000354901 ZC3H6P61129 1189 aaKnown RBP11.11□□□□□ -0.63
SMG6-202ENST00000354901 GABPB1Q06547 395 aaPredicted RBP11.11□□□□□ -0.63
SMG6-202ENST00000354901 ADCK5Q3MIX3 580 aa11.11□□□□□ -0.63
SMG6-202ENST00000354901 LTN1O94822 1766 aa11.11□□□□□ -0.63
SMG6-202ENST00000354901 KRT222Q8N1A0 295 aa11.11□□□□□ -0.63
SMG6-202ENST00000354901 GPATCH11Q8N954 259 aa11.11□□□□□ -0.63
SMG6-202ENST00000354901 INTS4Q96HW7 963 aaKnown RBP11.11□□□□□ -0.63
SMG6-202ENST00000354901 LSG1Q9H089 658 aaKnown RBP11.11□□□□□ -0.63
SMG6-202ENST00000354901 DBF4Q9UBU7 674 aaPredicted RBP11.11□□□□□ -0.63
SMG6-202ENST00000354901 RSPH14Q9UHP6 348 aa11.11□□□□□ -0.63
SMG6-202ENST00000354901 SMC3Q9UQE7 1217 aa11.11□□□□□ -0.63
SMG6-202ENST00000354901 RUFY3Q7L099 469 aa11.11□□□□□ -0.63
SMG6-202ENST00000354901 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.11□□□□□ -0.63
SMG6-202ENST00000354901 ADCY9O60503 1353 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 WDR33Q9C0J8 1336 aaKnown RBP11.1□□□□□ -0.63
SMG6-202ENST00000354901 TCHHQ07283 1943 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 PTGS1P23219 599 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 C10orf67Q8IYJ2 551 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 NECAB1Q8N987 351 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 CCDC112Q8NEF3 446 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 CTNNA3Q9UI47 895 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 STRCP1A6NGW2 1772 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 VPS37CA5D8V6 355 aaPredicted RBP11.1□□□□□ -0.63
SMG6-202ENST00000354901 RNMTO43148 476 aaKnown RBP11.1□□□□□ -0.63
SMG6-202ENST00000354901 GLRX3O76003 335 aaKnown RBP11.1□□□□□ -0.63
SMG6-202ENST00000354901 GCP02774 474 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 FAM208AQ9UK61 1670 aaKnown RBP11.1□□□□□ -0.63
SMG6-202ENST00000354901 ABCC6O95255 1503 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 LOC102724159A0A0B4J2E5 919 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 MYCNP04198 464 aaPredicted RBP11.1□□□□□ -0.63
SMG6-202ENST00000354901 TNNT1P13805 278 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 PWP2Q15269 919 aaKnown RBP11.1□□□□□ -0.63
SMG6-202ENST00000354901 AKAP4Q5JQC9 854 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 ANKRD24Q8TF21 1146 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 FAM227BQ96M60 508 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 BOLA2Q9H3K6 86 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 HDAC5Q9UQL6 1122 aa11.1□□□□□ -0.63
SMG6-202ENST00000354901 SYT1P21579 422 aa11.09□□□□□ -0.63
SMG6-202ENST00000354901 HNRNPH2P55795 449 aaKnown RBP11.09□□□□□ -0.63
SMG6-202ENST00000354901 LRMPQ12912 555 aa11.09□□□□□ -0.63
SMG6-202ENST00000354901 HSP90AB4PQ58FF6 505 aa11.09□□□□□ -0.63
SMG6-202ENST00000354901 NEK11Q8NG66 645 aa11.09□□□□□ -0.63
SMG6-202ENST00000354901 ANKRD7Q92527 254 aa11.09□□□□□ -0.63
SMG6-202ENST00000354901 LMTK3Q96Q04 1460 aa11.09□□□□□ -0.63
SMG6-202ENST00000354901 COL9A3Q14050 684 aaPredicted RBP11.09□□□□□ -0.63
SMG6-202ENST00000354901 TPD52L1Q16890 204 aaPredicted RBP11.09□□□□□ -0.63
SMG6-202ENST00000354901 GIMAP6Q6P9H5 292 aa11.09□□□□□ -0.63
SMG6-202ENST00000354901 ECHDC1Q9NTX5 307 aa11.09□□□□□ -0.63
SMG6-202ENST00000354901 BABAM1Q9NWV8 329 aa11.09□□□□□ -0.63
SMG6-202ENST00000354901 LIMCH1Q9UPQ0 1083 aa11.09□□□□□ -0.63
SMG6-202ENST00000354901 CEMIPQ8WUJ3 1361 aa11.09□□□□□ -0.63
SMG6-202ENST00000354901 ALS2Q96Q42 1657 aa11.09□□□□□ -0.63
SMG6-202ENST00000354901 AOX1Q06278 1338 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 349.9 ms