RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 SAPCD2Q86UD0 394 aa21.34■■□□□ 1.01
DDX55-202ENST00000354291 TCERG1O14776 1098 aaKnown RBP21.33■■□□□ 1.01
DDX55-202ENST00000354291 AMER1Q5JTC6 1135 aaPredicted RBP21.33■■□□□ 1.01
DDX55-202ENST00000354291 CC2D2BQ6DHV5 1058 aa21.33■■□□□ 1.01
DDX55-202ENST00000354291 CIAPIN1Q6FI81 312 aa21.32■■□□□ 1
DDX55-202ENST00000354291 ZNF408Q9H9D4 720 aa21.32■■□□□ 1
DDX55-202ENST00000354291 SNRPA1P09661 255 aaKnown RBP21.31■■□□□ 1
DDX55-202ENST00000354291 BRPF1P55201 1214 aaPredicted RBP21.31■■□□□ 1
DDX55-202ENST00000354291 HLFQ16534 295 aa21.31■■□□□ 1
DDX55-202ENST00000354291 NIM1KQ8IY84 436 aa21.31■■□□□ 1
DDX55-202ENST00000354291 ADARB2Q9NS39 739 aaKnown RBP21.31■■□□□ 1
DDX55-202ENST00000354291 THSD7BQ9C0I4 1608 aa21.3■■□□□ 1
DDX55-202ENST00000354291 NUTM1Q86Y26 1132 aa21.3■■□□□ 1
DDX55-202ENST00000354291 RPGRQ92834 1020 aaKnown RBP21.3■■□□□ 1
DDX55-202ENST00000354291 GLIS2Q9BZE0 524 aaPredicted RBP21.3■■□□□ 1
DDX55-202ENST00000354291 LTBP1Q14766 1721 aa21.29■■□□□ 1
DDX55-202ENST00000354291 COL4A5P29400 1685 aa21.29■■□□□ 1
DDX55-202ENST00000354291 NBPF26B4DH59 902 aa21.29■■□□□ 1
DDX55-202ENST00000354291 NBPF10Q6P3W6 841 aaKnown RBP21.29■■□□□ 1
DDX55-202ENST00000354291 NBPF15Q8N660 670 aa21.29■■□□□ 1
DDX55-202ENST00000354291 CRY2Q49AN0 593 aa21.28■■□□□ 1
DDX55-202ENST00000354291 GPRC5DQ9NZD1 345 aa21.28■■□□□ 1
DDX55-202ENST00000354291 BCORQ6W2J9 1755 aa21.28■■□□□ 1
DDX55-202ENST00000354291 PPIP5K2O43314 1243 aa21.27■■□□□ 1
DDX55-202ENST00000354291 SOX10P56693 466 aa21.27■■□□□ 1
DDX55-202ENST00000354291 GRIPAP1Q4V328 841 aa21.27■■□□□ 1
DDX55-202ENST00000354291 CC2D1BQ5T0F9 858 aaKnown RBP21.27■■□□□ 1
DDX55-202ENST00000354291 SLC51AQ86UW1 340 aa21.27■■□□□ 1
DDX55-202ENST00000354291 NGEFQ8N5V2 710 aa21.27■■□□□ 1
DDX55-202ENST00000354291 HHIPL1Q96JK4 782 aa21.27■■□□□ 1
DDX55-202ENST00000354291 NYXQ9GZU5 481 aa21.27■■□□□ 1
DDX55-202ENST00000354291 SNED1Q8TER0 1413 aa21.27■■□□□ 1
DDX55-202ENST00000354291 TRPM7Q96QT4 1865 aa21.26■□□□□ 0.99
DDX55-202ENST00000354291 CNGB1Q14028 1251 aaPredicted RBP21.26■□□□□ 0.99
DDX55-202ENST00000354291 ZIC5Q96T25 663 aa21.26■□□□□ 0.99
DDX55-202ENST00000354291 CEMIPQ8WUJ3 1361 aa21.25■□□□□ 0.99
DDX55-202ENST00000354291 RGL2O15211 777 aa21.25■□□□□ 0.99
DDX55-202ENST00000354291 AOC3Q16853 763 aa21.25■□□□□ 0.99
DDX55-202ENST00000354291 PHACTR3Q96KR7 559 aa21.25■□□□□ 0.99
DDX55-202ENST00000354291 ABCC12Q96J65 1359 aa21.24■□□□□ 0.99
DDX55-202ENST00000354291 PPEF1O14829 653 aaPredicted RBP21.24■□□□□ 0.99
DDX55-202ENST00000354291 HOXA10P31260 410 aaPredicted RBP21.24■□□□□ 0.99
DDX55-202ENST00000354291 GMPSP49915 693 aaPredicted RBP21.24■□□□□ 0.99
DDX55-202ENST00000354291 CXCL9Q07325 125 aa21.24■□□□□ 0.99
DDX55-202ENST00000354291 RBM17Q96I25 401 aaKnown RBP21.24■□□□□ 0.99
DDX55-202ENST00000354291 TMX4Q9H1E5 349 aaPredicted RBP21.24■□□□□ 0.99
DDX55-202ENST00000354291 NOGQ13253 232 aa21.23■□□□□ 0.99
DDX55-202ENST00000354291 ZNRF3Q9ULT6 936 aa21.22■□□□□ 0.99
DDX55-202ENST00000354291 NPC1L1Q9UHC9 1359 aa21.22■□□□□ 0.99
DDX55-202ENST00000354291 GPTP24298 496 aa21.21■□□□□ 0.99
DDX55-202ENST00000354291 HUNKP57058 714 aa21.21■□□□□ 0.99
DDX55-202ENST00000354291 CDC37L1Q7L3B6 337 aa21.21■□□□□ 0.99
DDX55-202ENST00000354291 MCM10Q7L590 875 aa21.21■□□□□ 0.99
DDX55-202ENST00000354291 RTF1Q92541 710 aaKnown RBP21.21■□□□□ 0.99
DDX55-202ENST00000354291 CRAMP1Q96RY5 1269 aa21.21■□□□□ 0.99
DDX55-202ENST00000354291 BCL2L13Q9BXK5 485 aa21.21■□□□□ 0.99
DDX55-202ENST00000354291 PGAP2Q9UHJ9 254 aa21.21■□□□□ 0.99
DDX55-202ENST00000354291 SIPA1L3O60292 1781 aaPredicted RBP21.2■□□□□ 0.99
DDX55-202ENST00000354291 PRKAR2BP31323 418 aa21.2■□□□□ 0.98
DDX55-202ENST00000354291 HIRAP54198 1017 aaPredicted RBP21.2■□□□□ 0.98
DDX55-202ENST00000354291 USP48Q86UV5 1035 aa21.2■□□□□ 0.98
DDX55-202ENST00000354291 ZC3H15Q8WU90 426 aaKnown RBP21.19■□□□□ 0.98
DDX55-202ENST00000354291 RAD17O75943 681 aa21.18■□□□□ 0.98
DDX55-202ENST00000354291 PRPF38BQ5VTL8 546 aaKnown RBP21.18■□□□□ 0.98
DDX55-202ENST00000354291 DLK2Q6UY11 383 aa21.18■□□□□ 0.98
DDX55-202ENST00000354291 ERVV-1B6SEH8 477 aa21.17■□□□□ 0.98
DDX55-202ENST00000354291 DCTN1Q14203 1278 aa21.17■□□□□ 0.98
DDX55-202ENST00000354291 SUSD4Q5VX71 490 aa21.17■□□□□ 0.98
DDX55-202ENST00000354291 TRPM4Q8TD43 1214 aa21.17■□□□□ 0.98
DDX55-202ENST00000354291 VPS33BQ9H267 617 aa21.17■□□□□ 0.98
DDX55-202ENST00000354291 RRP7AQ9Y3A4 280 aaKnown RBP21.17■□□□□ 0.98
DDX55-202ENST00000354291 KIF7Q2M1P5 1343 aa21.17■□□□□ 0.98
DDX55-202ENST00000354291 TRPA1O75762 1119 aa21.16■□□□□ 0.98
DDX55-202ENST00000354291 C3orf67Q6ZVT6 689 aa21.16■□□□□ 0.98
DDX55-202ENST00000354291 SUPT20HQ8NEM7 779 aa21.16■□□□□ 0.98
DDX55-202ENST00000354291 MIS18AQ9NYP9 233 aa21.16■□□□□ 0.98
DDX55-202ENST00000354291 CNOT7Q9UIV1 285 aaKnown RBP21.16■□□□□ 0.98
DDX55-202ENST00000354291 ATP6V0A2Q9Y487 856 aa21.16■□□□□ 0.98
DDX55-202ENST00000354291 MAP3K15Q6ZN16 1313 aa21.15■□□□□ 0.98
DDX55-202ENST00000354291 KIF23Q02241 960 aaPredicted RBP21.15■□□□□ 0.98
DDX55-202ENST00000354291 TNIP1Q15025 636 aa21.15■□□□□ 0.98
DDX55-202ENST00000354291 RGMBQ6NW40 437 aa21.15■□□□□ 0.98
DDX55-202ENST00000354291 KIF6Q6ZMV9 814 aa21.15■□□□□ 0.98
DDX55-202ENST00000354291 TTLL7Q6ZT98 887 aa21.15■□□□□ 0.98
DDX55-202ENST00000354291 SHTN1A0MZ66 631 aa21.14■□□□□ 0.97
DDX55-202ENST00000354291 H7C1D1 291 aa21.14■□□□□ 0.97
DDX55-202ENST00000354291 PER1O15534 1290 aaPredicted RBP21.14■□□□□ 0.97
DDX55-202ENST00000354291 NLRP3Q96P20 1036 aa21.14■□□□□ 0.97
DDX55-202ENST00000354291 RSPH6AQ9H0K4 717 aa21.14■□□□□ 0.97
DDX55-202ENST00000354291 ZBTB3Q9H5J0 574 aa21.14■□□□□ 0.97
DDX55-202ENST00000354291 UBN2Q6ZU65 1347 aa21.13■□□□□ 0.97
DDX55-202ENST00000354291 DPP8Q6V1X1 898 aaPredicted RBP21.13■□□□□ 0.97
DDX55-202ENST00000354291 RNF186Q9NXI6 227 aa21.13■□□□□ 0.97
DDX55-202ENST00000354291 SAGE1Q9NXZ1 904 aa21.13■□□□□ 0.97
DDX55-202ENST00000354291 FAM155AB1AL88 458 aaPredicted RBP21.12■□□□□ 0.97
DDX55-202ENST00000354291 MYL6BP14649 208 aa21.12■□□□□ 0.97
DDX55-202ENST00000354291 ZNF157P51786 506 aaPredicted RBP21.12■□□□□ 0.97
DDX55-202ENST00000354291 TAF7Q15545 349 aaPredicted RBP21.12■□□□□ 0.97
DDX55-202ENST00000354291 C2orf69Q8N8R5 385 aa21.12■□□□□ 0.97
DDX55-202ENST00000354291 CCDC102AQ96A19 550 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms