RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 CCDC194A0A1B0GVG4 234 aa12.41□□□□□ -0.42
CCDC18-201ENST00000343253 SYKP43405 635 aa12.41□□□□□ -0.42
CCDC18-201ENST00000343253 SKAP1Q86WV1 359 aa12.41□□□□□ -0.42
CCDC18-201ENST00000343253 KCNG4Q8TDN1 519 aa12.41□□□□□ -0.42
CCDC18-201ENST00000343253 MYO1BO43795 1136 aa12.41□□□□□ -0.42
CCDC18-201ENST00000343253 MAP3K9P80192 1104 aa12.41□□□□□ -0.42
CCDC18-201ENST00000343253 CCDC96Q2M329 555 aa12.41□□□□□ -0.42
CCDC18-201ENST00000343253 CCDC50Q8IVM0 306 aa12.41□□□□□ -0.42
CCDC18-201ENST00000343253 SAMD15Q9P1V8 674 aa12.41□□□□□ -0.42
CCDC18-201ENST00000343253 LRP2BPQ9P2M1 347 aa12.41□□□□□ -0.42
CCDC18-201ENST00000343253 SEC63Q9UGP8 760 aaKnown RBP12.41□□□□□ -0.42
CCDC18-201ENST00000343253 KIF3CO14782 793 aa12.41□□□□□ -0.42
CCDC18-201ENST00000343253 ZEB2O60315 1214 aa12.41□□□□□ -0.42
CCDC18-201ENST00000343253 DNAJC21Q5F1R6 531 aaKnown RBP12.41□□□□□ -0.42
CCDC18-201ENST00000343253 SLC12A7Q9Y666 1083 aa12.41□□□□□ -0.42
CCDC18-201ENST00000343253 GOLGA8BA8MQT2 603 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 SSRP1Q08945 709 aaKnown RBP12.4□□□□□ -0.42
CCDC18-201ENST00000343253 IQCA1Q86XH1 822 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 LMNTD2Q8IXW0 634 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 IFT74Q96LB3 600 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 RNF41Q9H4P4 317 aaPredicted RBP12.4□□□□□ -0.42
CCDC18-201ENST00000343253 NOL3O60936 208 aaKnown RBP12.4□□□□□ -0.42
CCDC18-201ENST00000343253 BMP15O95972 392 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 UBA7P41226 1012 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 KRBA2Q6ZNG9 492 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 DRC1Q96MC2 740 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 NAPBQ9H115 298 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 ORC3Q9UBD5 711 aaPredicted RBP12.4□□□□□ -0.42
CCDC18-201ENST00000343253 SWAP70Q9UH65 585 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 ERBINQ96RT1 1412 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 SMARCA5O60264 1052 aaPredicted RBP12.4□□□□□ -0.42
CCDC18-201ENST00000343253 SETDB1Q15047 1291 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 CCDC110Q8TBZ0 833 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 LRRC27Q9C0I9 530 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 NPHP3Q7Z494 1330 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 PHACTR2O75167 634 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 KIF5AQ12840 1032 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 ZNF530Q6P9A1 599 aaPredicted RBP12.4□□□□□ -0.42
CCDC18-201ENST00000343253 MRPS27Q92552 414 aaKnown RBP12.4□□□□□ -0.42
CCDC18-201ENST00000343253 EVI5LQ96CN4 794 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 BOLA2Q9H3K6 86 aa12.4□□□□□ -0.42
CCDC18-201ENST00000343253 FEZ2Q9UHY8 353 aaPredicted RBP12.4□□□□□ -0.42
CCDC18-201ENST00000343253 ZNF213O14771 459 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 IARSP41252 1262 aaKnown RBP12.39□□□□□ -0.43
CCDC18-201ENST00000343253 TSNARE1Q96NA8 513 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 DACT1Q9NYF0 836 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 RPGRIP1LQ68CZ1 1315 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 TNIP1Q15025 636 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 CCDC97Q96F63 343 aaPredicted RBP12.39□□□□□ -0.43
CCDC18-201ENST00000343253 CALML4Q96GE6 196 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 GOLGA8AA7E2F4 631 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 TATP17735 454 aaPredicted RBP12.39□□□□□ -0.43
CCDC18-201ENST00000343253 TUBB2AQ13885 445 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 USP48Q86UV5 1035 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 MIPOL1Q8TD10 442 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 TUBB2BQ9BVA1 445 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 FAM184BQ9ULE4 1060 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 KIAA1107Q9UPP5 1409 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 INPP5BP32019 993 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 CFAP58Q5T655 872 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 TRIM47Q96LD4 638 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 USP16Q9Y5T5 823 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCDC18-201ENST00000343253 TOP2BQ02880 1626 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 PTPRGP23470 1445 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 NAIPQ13075 1403 aa12.39□□□□□ -0.43
CCDC18-201ENST00000343253 A0A087WZG4 1122 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 RAB3GAP1Q15042 981 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 SMC5Q8IY18 1101 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 SPAG5Q96R06 1193 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 FERMT1Q9BQL6 677 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 UBA5Q9GZZ9 404 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 ATP2A1O14983 1001 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 IDEP14735 1019 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 TYRO3Q06418 890 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 TCERG1LQ5VWI1 586 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 ABTB2Q8N961 1025 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 DDX23Q9BUQ8 820 aaKnown RBP12.38□□□□□ -0.43
CCDC18-201ENST00000343253 ECHDC1Q9NTX5 307 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 USP5P45974 858 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 STXBP4Q6ZWJ1 553 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 MYRIPQ8NFW9 859 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 DDX54Q8TDD1 881 aaKnown RBP12.38□□□□□ -0.43
CCDC18-201ENST00000343253 LMBR1Q8WVP7 490 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 FAM177BA6PVY3 158 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 IFIT1P09914 478 aaKnown RBP12.38□□□□□ -0.43
CCDC18-201ENST00000343253 ARHGAP25P42331 645 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 CLNS1AP54105 237 aaKnown RBP12.38□□□□□ -0.43
CCDC18-201ENST00000343253 SYT10Q6XYQ8 523 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 GTF3C6Q969F1 213 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 DNAJC25Q9H1X3 360 aa12.38□□□□□ -0.43
CCDC18-201ENST00000343253 NDUFAB1O14561 156 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 TTC22Q5TAA0 569 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 DUSP27Q5VZP5 1158 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 CACNA2D3Q8IZS8 1091 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 AOPEPQ8N6M6 819 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 PIBF1Q8WXW3 757 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 STRN4Q9NRL3 753 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 NCAPD3P42695 1498 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 ALDH3A1P30838 453 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms