RNA–Protein interactions for RNA: ENST00000342916.7

EGFR-202, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-202ENST00000342916 CAMTA2O94983 1202 aa23.51■■□□□ 1.35
EGFR-202ENST00000342916 LINS1Q8NG48 757 aa23.51■■□□□ 1.35
EGFR-202ENST00000342916 SMARCA5O60264 1052 aaPredicted RBP23.51■■□□□ 1.35
EGFR-202ENST00000342916 SCN7AQ01118 1682 aa23.5■■□□□ 1.35
EGFR-202ENST00000342916 C16orf71Q8IYS4 520 aaPredicted RBP23.5■■□□□ 1.35
EGFR-202ENST00000342916 IPO9Q96P70 1041 aaKnown RBP23.5■■□□□ 1.35
EGFR-202ENST00000342916 TFCP2L1Q9NZI6 479 aa23.5■■□□□ 1.35
EGFR-202ENST00000342916 EXOC6BQ9Y2D4 811 aa23.5■■□□□ 1.35
EGFR-202ENST00000342916 PLEKHM2Q8IWE5 1019 aa23.49■■□□□ 1.35
EGFR-202ENST00000342916 GPTP24298 496 aa23.49■■□□□ 1.35
EGFR-202ENST00000342916 USPL1Q5W0Q7 1092 aa23.49■■□□□ 1.35
EGFR-202ENST00000342916 GIGYF2Q6Y7W6 1299 aaKnown RBP23.49■■□□□ 1.35
EGFR-202ENST00000342916 JARID2Q92833 1246 aaPredicted RBP23.49■■□□□ 1.35
EGFR-202ENST00000342916 NEURL1BA8MQ27 555 aa23.48■■□□□ 1.35
EGFR-202ENST00000342916 BMP2KLQ5H9B9 411 aa23.48■■□□□ 1.35
EGFR-202ENST00000342916 TRAPPC3LQ5T215 181 aa23.48■■□□□ 1.35
EGFR-202ENST00000342916 OTUD7AQ8TE49 926 aaPredicted RBP23.48■■□□□ 1.35
EGFR-202ENST00000342916 SSH3Q8TE77 659 aa23.48■■□□□ 1.35
EGFR-202ENST00000342916 NEXNQ0ZGT2 675 aa23.48■■□□□ 1.35
EGFR-202ENST00000342916 CCDC125Q86Z20 511 aa23.48■■□□□ 1.35
EGFR-202ENST00000342916 BCL2L12Q9HB09 334 aa23.48■■□□□ 1.35
EGFR-202ENST00000342916 PPP1R42Q7Z4L9 355 aa23.47■■□□□ 1.35
EGFR-202ENST00000342916 BCL11AQ9H165 835 aa23.47■■□□□ 1.35
EGFR-202ENST00000342916 TCIRG1Q13488 830 aa23.47■■□□□ 1.35
EGFR-202ENST00000342916 POLA2Q14181 598 aa23.47■■□□□ 1.35
EGFR-202ENST00000342916 C9orf78Q9NZ63 289 aaPredicted RBP23.47■■□□□ 1.35
EGFR-202ENST00000342916 ZBTB47Q9UFB7 747 aaPredicted RBP23.47■■□□□ 1.35
EGFR-202ENST00000342916 IBTKQ9P2D0 1353 aaPredicted RBP23.46■■□□□ 1.35
EGFR-202ENST00000342916 ERVV-1B6SEH8 477 aa23.46■■□□□ 1.35
EGFR-202ENST00000342916 RFC4P35249 363 aa23.46■■□□□ 1.35
EGFR-202ENST00000342916 NARFQ9UHQ1 456 aa23.46■■□□□ 1.35
EGFR-202ENST00000342916 UTYO14607 1347 aa23.46■■□□□ 1.35
EGFR-202ENST00000342916 A0A087WZG4 1122 aa23.45■■□□□ 1.35
EGFR-202ENST00000342916 RTL5Q5HYW3 569 aaPredicted RBP23.45■■□□□ 1.35
EGFR-202ENST00000342916 GRM8O00222 908 aa23.45■■□□□ 1.34
EGFR-202ENST00000342916 UBN2Q6ZU65 1347 aa23.45■■□□□ 1.34
EGFR-202ENST00000342916 USP42Q9H9J4 1324 aaKnown RBP23.45■■□□□ 1.34
EGFR-202ENST00000342916 SSFA2P28290 1259 aa23.44■■□□□ 1.34
EGFR-202ENST00000342916 SRGAP3O43295 1099 aa23.44■■□□□ 1.34
EGFR-202ENST00000342916 ZPR1O75312 459 aa23.44■■□□□ 1.34
EGFR-202ENST00000342916 GCKRQ14397 625 aa23.44■■□□□ 1.34
EGFR-202ENST00000342916 COL23A1Q86Y22 540 aaPredicted RBP23.44■■□□□ 1.34
EGFR-202ENST00000342916 ISCA1Q9BUE6 129 aa23.44■■□□□ 1.34
EGFR-202ENST00000342916 PNPLA7Q6ZV29 1317 aa23.43■■□□□ 1.34
EGFR-202ENST00000342916 GSPT1P15170 499 aaKnown RBP23.43■■□□□ 1.34
EGFR-202ENST00000342916 SLC15A2Q16348 729 aa23.43■■□□□ 1.34
EGFR-202ENST00000342916 BICDL1Q6ZP65 573 aa23.43■■□□□ 1.34
EGFR-202ENST00000342916 FAM177BA6PVY3 158 aa23.42■■□□□ 1.34
EGFR-202ENST00000342916 MTX1Q13505 466 aa23.42■■□□□ 1.34
EGFR-202ENST00000342916 KAZALD1Q96I82 304 aa23.42■■□□□ 1.34
EGFR-202ENST00000342916 PDGFDQ9GZP0 370 aaPredicted RBP23.42■■□□□ 1.34
EGFR-202ENST00000342916 ADRA2BP18089 450 aa23.41■■□□□ 1.34
EGFR-202ENST00000342916 TBC1D9BQ66K14 1250 aa23.41■■□□□ 1.34
EGFR-202ENST00000342916 LRRCC1Q9C099 1032 aa23.41■■□□□ 1.34
EGFR-202ENST00000342916 NLRP10Q86W26 655 aa23.41■■□□□ 1.34
EGFR-202ENST00000342916 ZNF34Q8IZ26 560 aa23.41■■□□□ 1.34
EGFR-202ENST00000342916 SYNE4Q8N205 404 aa23.41■■□□□ 1.34
EGFR-202ENST00000342916 SUCLG2Q96I99 432 aa23.41■■□□□ 1.34
EGFR-202ENST00000342916 CWC25Q9NXE8 425 aaPredicted RBP23.4■■□□□ 1.34
EGFR-202ENST00000342916 NIP7Q9Y221 180 aaKnown RBP eCLIP23.4■■□□□ 1.34
EGFR-202ENST00000342916 TTC22Q5TAA0 569 aa23.4■■□□□ 1.34
EGFR-202ENST00000342916 UBE3BQ7Z3V4 1068 aa23.4■■□□□ 1.34
EGFR-202ENST00000342916 STK32BQ9NY57 414 aa23.4■■□□□ 1.34
EGFR-202ENST00000342916 GYS1P13807 737 aa23.39■■□□□ 1.34
EGFR-202ENST00000342916 CCDC191Q8NCU4 936 aa23.39■■□□□ 1.33
EGFR-202ENST00000342916 SALL3Q9BXA9 1300 aa23.39■■□□□ 1.33
EGFR-202ENST00000342916 HSP90AB3PQ58FF7 597 aa23.38■■□□□ 1.33
EGFR-202ENST00000342916 ZNF652Q9Y2D9 606 aa23.38■■□□□ 1.33
EGFR-202ENST00000342916 SURF6O75683 361 aaKnown RBP23.37■■□□□ 1.33
EGFR-202ENST00000342916 SUSD4Q5VX71 490 aa23.37■■□□□ 1.33
EGFR-202ENST00000342916 CLEC4GQ6UXB4 293 aa23.37■■□□□ 1.33
EGFR-202ENST00000342916 FAM89AQ96GI7 184 aa23.37■■□□□ 1.33
EGFR-202ENST00000342916 BICC1Q9H694 974 aaKnown RBP23.37■■□□□ 1.33
EGFR-202ENST00000342916 HDAC5Q9UQL6 1122 aa23.37■■□□□ 1.33
EGFR-202ENST00000342916 QSER1Q2KHR3 1735 aa23.37■■□□□ 1.33
EGFR-202ENST00000342916 TRIM28Q13263 835 aaKnown RBP23.36■■□□□ 1.33
EGFR-202ENST00000342916 TBC1D32Q96NH3 1257 aa23.36■■□□□ 1.33
EGFR-202ENST00000342916 GOLGB1Q14789 3259 aaKnown RBP23.36■■□□□ 1.33
EGFR-202ENST00000342916 CASP7P55210 303 aa23.36■■□□□ 1.33
EGFR-202ENST00000342916 NOP58Q9Y2X3 529 aaKnown RBP23.36■■□□□ 1.33
EGFR-202ENST00000342916 SRCAPQ6ZRS2 3230 aa23.35■■□□□ 1.33
EGFR-202ENST00000342916 PDE1AP54750 535 aa23.35■■□□□ 1.33
EGFR-202ENST00000342916 OSBPL3Q9H4L5 887 aa23.35■■□□□ 1.33
EGFR-202ENST00000342916 UPF2Q9HAU5 1272 aaKnown RBP23.35■■□□□ 1.33
EGFR-202ENST00000342916 RAB11FIP3O75154 756 aa23.35■■□□□ 1.33
EGFR-202ENST00000342916 HMGB2P26583 209 aaKnown RBP23.35■■□□□ 1.33
EGFR-202ENST00000342916 MFAP1P55081 439 aaKnown RBP23.35■■□□□ 1.33
EGFR-202ENST00000342916 MSL1Q68DK7 614 aa23.35■■□□□ 1.33
EGFR-202ENST00000342916 COL24A1Q17RW2 1714 aa23.34■■□□□ 1.33
EGFR-202ENST00000342916 H7C1W4 665 aa23.34■■□□□ 1.33
EGFR-202ENST00000342916 EPHA10Q5JZY3 1008 aa23.34■■□□□ 1.33
EGFR-202ENST00000342916 TBC1D9Q6ZT07 1266 aa23.34■■□□□ 1.33
EGFR-202ENST00000342916 TRMT112Q9UI30 125 aaKnown RBP23.34■■□□□ 1.33
EGFR-202ENST00000342916 NFIXQ14938 502 aa23.33■■□□□ 1.33
EGFR-202ENST00000342916 NUTM1Q86Y26 1132 aa23.33■■□□□ 1.33
EGFR-202ENST00000342916 DDRGK1Q96HY6 314 aa23.33■■□□□ 1.33
EGFR-202ENST00000342916 IL1RAPL2Q9NP60 686 aa23.33■■□□□ 1.33
EGFR-202ENST00000342916 RHPN1Q8TCX5 695 aa23.33■■□□□ 1.33
EGFR-202ENST00000342916 CCDC24Q8N4L8 307 aa23.32■■□□□ 1.32
EGFR-202ENST00000342916 TSHZ3Q63HK5 1081 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms