RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 LRRFIP2Q9Y608 721 aaKnown RBP25.89■■□□□ 1.74
CLDND1-201ENST00000341181 GNAI3P08754 354 aa25.89■■□□□ 1.73
CLDND1-201ENST00000341181 TRIM28Q13263 835 aaKnown RBP25.89■■□□□ 1.73
CLDND1-201ENST00000341181 TBC1D9BQ66K14 1250 aa25.89■■□□□ 1.73
CLDND1-201ENST00000341181 NIP7Q9Y221 180 aaKnown RBP eCLIP25.89■■□□□ 1.73
CLDND1-201ENST00000341181 ZNF652Q9Y2D9 606 aa25.89■■□□□ 1.73
CLDND1-201ENST00000341181 UTYO14607 1347 aa25.89■■□□□ 1.73
CLDND1-201ENST00000341181 IBTKQ9P2D0 1353 aaPredicted RBP25.89■■□□□ 1.73
CLDND1-201ENST00000341181 CLEC4GQ6UXB4 293 aa25.88■■□□□ 1.73
CLDND1-201ENST00000341181 HMGB2P26583 209 aaKnown RBP25.88■■□□□ 1.73
CLDND1-201ENST00000341181 BICDL1Q6ZP65 573 aa25.88■■□□□ 1.73
CLDND1-201ENST00000341181 CASP7P55210 303 aa25.87■■□□□ 1.73
CLDND1-201ENST00000341181 SYNE4Q8N205 404 aa25.87■■□□□ 1.73
CLDND1-201ENST00000341181 CHMP4BQ9H444 224 aaKnown RBP25.87■■□□□ 1.73
CLDND1-201ENST00000341181 GYS1P13807 737 aa25.86■■□□□ 1.73
CLDND1-201ENST00000341181 AAMPQ13685 434 aa25.86■■□□□ 1.73
CLDND1-201ENST00000341181 KAZALD1Q96I82 304 aa25.86■■□□□ 1.73
CLDND1-201ENST00000341181 FAM177BA6PVY3 158 aa25.86■■□□□ 1.73
CLDND1-201ENST00000341181 GNAI2P04899 355 aa25.86■■□□□ 1.73
CLDND1-201ENST00000341181 SIRT2Q8IXJ6 389 aa25.86■■□□□ 1.73
CLDND1-201ENST00000341181 SUCLG2Q96I99 432 aa25.86■■□□□ 1.73
CLDND1-201ENST00000341181 TSHZ2Q9NRE2 1034 aa25.86■■□□□ 1.73
CLDND1-201ENST00000341181 SRCAPQ6ZRS2 3230 aa25.85■■□□□ 1.73
CLDND1-201ENST00000341181 FAM89AQ96GI7 184 aa25.85■■□□□ 1.73
CLDND1-201ENST00000341181 STK32BQ9NY57 414 aa25.85■■□□□ 1.73
CLDND1-201ENST00000341181 SUSD4Q5VX71 490 aa25.85■■□□□ 1.73
CLDND1-201ENST00000341181 GOLGB1Q14789 3259 aaKnown RBP25.85■■□□□ 1.73
CLDND1-201ENST00000341181 H7C1W4 665 aa25.84■■□□□ 1.73
CLDND1-201ENST00000341181 MSH5O43196 834 aa25.84■■□□□ 1.73
CLDND1-201ENST00000341181 CEP85Q6P2H3 762 aa25.84■■□□□ 1.73
CLDND1-201ENST00000341181 PDGFDQ9GZP0 370 aaPredicted RBP25.83■■□□□ 1.73
CLDND1-201ENST00000341181 IGHDP01880 384 aa25.83■■□□□ 1.73
CLDND1-201ENST00000341181 EPHA10Q5JZY3 1008 aa25.83■■□□□ 1.73
CLDND1-201ENST00000341181 COL24A1Q17RW2 1714 aa25.83■■□□□ 1.73
CLDND1-201ENST00000341181 RGL2O15211 777 aa25.82■■□□□ 1.72
CLDND1-201ENST00000341181 TRMT112Q9UI30 125 aaKnown RBP25.82■■□□□ 1.72
CLDND1-201ENST00000341181 QSER1Q2KHR3 1735 aa25.82■■□□□ 1.72
CLDND1-201ENST00000341181 ZBTB38Q8NAP3 1195 aaPredicted RBP25.81■■□□□ 1.72
CLDND1-201ENST00000341181 BICC1Q9H694 974 aaKnown RBP25.81■■□□□ 1.72
CLDND1-201ENST00000341181 NTSR2O95665 410 aa25.8■■□□□ 1.72
CLDND1-201ENST00000341181 NFIXQ14938 502 aa25.8■■□□□ 1.72
CLDND1-201ENST00000341181 PCCAP05165 728 aaPredicted RBP25.8■■□□□ 1.72
CLDND1-201ENST00000341181 PARP10Q53GL7 1025 aa25.8■■□□□ 1.72
CLDND1-201ENST00000341181 NUTM1Q86Y26 1132 aa25.8■■□□□ 1.72
CLDND1-201ENST00000341181 PNMA6EA0A0J9YXQ4 647 aa25.79■■□□□ 1.72
CLDND1-201ENST00000341181 ANKRD44Q8N8A2 993 aa25.79■■□□□ 1.72
CLDND1-201ENST00000341181 FLAD1Q8NFF5 587 aa25.79■■□□□ 1.72
CLDND1-201ENST00000341181 SETDB2Q96T68 719 aa25.79■■□□□ 1.72
CLDND1-201ENST00000341181 MSL1Q68DK7 614 aa25.78■■□□□ 1.72
CLDND1-201ENST00000341181 UTP14AQ9BVJ6 771 aaKnown RBP25.78■■□□□ 1.72
CLDND1-201ENST00000341181 KDM2BQ8NHM5 1336 aa25.77■■□□□ 1.72
CLDND1-201ENST00000341181 CARMIL3Q8ND23 1372 aa25.75■■□□□ 1.71
CLDND1-201ENST00000341181 FOXO4P98177 505 aa25.75■■□□□ 1.71
CLDND1-201ENST00000341181 PPP1R42Q7Z4L9 355 aa25.75■■□□□ 1.71
CLDND1-201ENST00000341181 SH3TC1Q8TE82 1336 aa25.75■■□□□ 1.71
CLDND1-201ENST00000341181 ABCC12Q96J65 1359 aa25.75■■□□□ 1.71
CLDND1-201ENST00000341181 DDR1Q08345 913 aa25.75■■□□□ 1.71
CLDND1-201ENST00000341181 HDAC1Q13547 482 aaPredicted RBP25.75■■□□□ 1.71
CLDND1-201ENST00000341181 RPAP2Q8IXW5 612 aaPredicted RBP25.75■■□□□ 1.71
CLDND1-201ENST00000341181 CCDC24Q8N4L8 307 aa25.75■■□□□ 1.71
CLDND1-201ENST00000341181 DDX60Q8IY21 1712 aaKnown RBP25.75■■□□□ 1.71
CLDND1-201ENST00000341181 CDHR2Q9BYE9 1310 aa25.74■■□□□ 1.71
CLDND1-201ENST00000341181 IRS4O14654 1257 aaPredicted RBP25.74■■□□□ 1.71
CLDND1-201ENST00000341181 HCLS1P14317 486 aaPredicted RBP25.74■■□□□ 1.71
CLDND1-201ENST00000341181 TM4SF1P30408 202 aa25.73■■□□□ 1.71
CLDND1-201ENST00000341181 ERFEQ4G0M1 354 aa25.73■■□□□ 1.71
CLDND1-201ENST00000341181 NBPF5PQ86XG9 351 aaPredicted RBP25.73■■□□□ 1.71
CLDND1-201ENST00000341181 SRGAP3O43295 1099 aa25.73■■□□□ 1.71
CLDND1-201ENST00000341181 ATP8B2P98198 1209 aa25.72■■□□□ 1.71
CLDND1-201ENST00000341181 MTX1Q13505 466 aa25.72■■□□□ 1.71
CLDND1-201ENST00000341181 RABL6Q3YEC7 729 aaPredicted RBP25.72■■□□□ 1.71
CLDND1-201ENST00000341181 LMBR1LQ6UX01 489 aa25.72■■□□□ 1.71
CLDND1-201ENST00000341181 LAMB2P55268 1798 aa25.71■■□□□ 1.71
CLDND1-201ENST00000341181 CCDC85AQ96PX6 553 aaPredicted RBP25.71■■□□□ 1.71
CLDND1-201ENST00000341181 RWDD1Q9H446 243 aaPredicted RBP25.71■■□□□ 1.71
CLDND1-201ENST00000341181 POLRMTO00411 1230 aaKnown RBP25.71■■□□□ 1.71
CLDND1-201ENST00000341181 SKAP1Q86WV1 359 aa25.7■■□□□ 1.7
CLDND1-201ENST00000341181 SSH3Q8TE77 659 aa25.7■■□□□ 1.7
CLDND1-201ENST00000341181 PLA2G12BQ9BX93 195 aa25.7■■□□□ 1.7
CLDND1-201ENST00000341181 C3orf67Q6ZVT6 689 aa25.69■■□□□ 1.7
CLDND1-201ENST00000341181 NLGN1Q8N2Q7 840 aa25.69■■□□□ 1.7
CLDND1-201ENST00000341181 HDAC5Q9UQL6 1122 aa25.69■■□□□ 1.7
CLDND1-201ENST00000341181 MYH3P11055 1940 aa25.69■■□□□ 1.7
CLDND1-201ENST00000341181 POLA2Q14181 598 aa25.69■■□□□ 1.7
CLDND1-201ENST00000341181 TNRC6CQ9HCJ0 1690 aaKnown RBP25.68■■□□□ 1.7
CLDND1-201ENST00000341181 R3HDM1Q15032 1099 aaKnown RBP25.68■■□□□ 1.7
CLDND1-201ENST00000341181 KLHDC4Q8TBB5 520 aa25.68■■□□□ 1.7
CLDND1-201ENST00000341181 NYXQ9GZU5 481 aa25.68■■□□□ 1.7
CLDND1-201ENST00000341181 CHMP3Q9Y3E7 222 aa25.68■■□□□ 1.7
CLDND1-201ENST00000341181 MMP10P09238 476 aa25.68■■□□□ 1.7
CLDND1-201ENST00000341181 CTSWP56202 376 aa25.68■■□□□ 1.7
CLDND1-201ENST00000341181 FAM161AQ3B820 660 aa25.68■■□□□ 1.7
CLDND1-201ENST00000341181 CENPQQ7L2Z9 268 aaPredicted RBP25.68■■□□□ 1.7
CLDND1-201ENST00000341181 CASZ1Q86V15 1759 aa25.67■■□□□ 1.7
CLDND1-201ENST00000341181 SERPINB2P05120 415 aa25.67■■□□□ 1.7
CLDND1-201ENST00000341181 GTF2E1P29083 439 aaPredicted RBP25.67■■□□□ 1.7
CLDND1-201ENST00000341181 PRR5LQ6MZQ0 368 aa25.67■■□□□ 1.7
CLDND1-201ENST00000341181 CNBD1Q8NA66 436 aa25.67■■□□□ 1.7
CLDND1-201ENST00000341181 PA2G4Q9UQ80 394 aaKnown RBP25.67■■□□□ 1.7
CLDND1-201ENST00000341181 PDE8AO60658 829 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms