RNA–Protein interactions for RNA: ENST00000340954.11

STAU1-201, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene STAU1, Length 3,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-201ENST00000340954 PIP4K2BP78356 416 aa12.81□□□□□ -0.36
STAU1-201ENST00000340954 OSBPL3Q9H4L5 887 aa12.81□□□□□ -0.36
STAU1-201ENST00000340954 CNTROBQ8N137 903 aa12.8□□□□□ -0.36
STAU1-201ENST00000340954 EAF2Q96CJ1 260 aaPredicted RBP12.8□□□□□ -0.36
STAU1-201ENST00000340954 NEUROD6Q96NK8 337 aa12.8□□□□□ -0.36
STAU1-201ENST00000340954 SLIT3O75094 1523 aa12.8□□□□□ -0.36
STAU1-201ENST00000340954 WDR17Q8IZU2 1322 aa12.8□□□□□ -0.36
STAU1-201ENST00000340954 STRCP1A6NGW2 1772 aa12.8□□□□□ -0.36
STAU1-201ENST00000340954 FAM177BA6PVY3 158 aa12.8□□□□□ -0.36
STAU1-201ENST00000340954 HSP90AB4PQ58FF6 505 aa12.8□□□□□ -0.36
STAU1-201ENST00000340954 PI4K2BQ8TCG2 481 aa12.8□□□□□ -0.36
STAU1-201ENST00000340954 METTL22Q9BUU2 404 aaPredicted RBP12.8□□□□□ -0.36
STAU1-201ENST00000340954 ASAP1Q9ULH1 1129 aa12.8□□□□□ -0.36
STAU1-201ENST00000340954 SASH1O94885 1247 aa12.79□□□□□ -0.36
STAU1-201ENST00000340954 SALL3Q9BXA9 1300 aa12.79□□□□□ -0.36
STAU1-201ENST00000340954 NBPF26B4DH59 902 aa12.79□□□□□ -0.36
STAU1-201ENST00000340954 NBPF14Q5TI25 921 aa12.79□□□□□ -0.36
STAU1-201ENST00000340954 NBPF10Q6P3W6 841 aaKnown RBP12.79□□□□□ -0.36
STAU1-201ENST00000340954 LMBR1LQ6UX01 489 aa12.79□□□□□ -0.36
STAU1-201ENST00000340954 NBPF15Q8N660 670 aa12.79□□□□□ -0.36
STAU1-201ENST00000340954 FAM208AQ9UK61 1670 aaKnown RBP12.78□□□□□ -0.36
STAU1-201ENST00000340954 CHGBP05060 677 aa12.78□□□□□ -0.36
STAU1-201ENST00000340954 GTF2E1P29083 439 aaPredicted RBP12.78□□□□□ -0.36
STAU1-201ENST00000340954 MCTP1Q6DN14 999 aa12.78□□□□□ -0.36
STAU1-201ENST00000340954 TMOD3Q9NYL9 352 aa12.78□□□□□ -0.36
STAU1-201ENST00000340954 PLCD3Q8N3E9 789 aa12.78□□□□□ -0.36
STAU1-201ENST00000340954 ZNF594Q96JF6 807 aaPredicted RBP12.78□□□□□ -0.36
STAU1-201ENST00000340954 ECHDC1Q9NTX5 307 aa12.78□□□□□ -0.36
STAU1-201ENST00000340954 RRP9O43818 475 aaKnown RBP12.78□□□□□ -0.36
STAU1-201ENST00000340954 GPTP24298 496 aa12.78□□□□□ -0.36
STAU1-201ENST00000340954 LRRC37A3O60309 1634 aa12.77□□□□□ -0.36
STAU1-201ENST00000340954 PCDH11XQ9BZA7 1347 aa12.77□□□□□ -0.36
STAU1-201ENST00000340954 PCDH11YQ9BZA8 1340 aa12.77□□□□□ -0.36
STAU1-201ENST00000340954 GPATCH3Q96I76 525 aa12.77□□□□□ -0.36
STAU1-201ENST00000340954 FSD1Q9BTV5 496 aa12.77□□□□□ -0.36
STAU1-201ENST00000340954 STAP2Q9UGK3 403 aa12.77□□□□□ -0.36
STAU1-201ENST00000340954 TFCP2Q12800 502 aa12.77□□□□□ -0.37
STAU1-201ENST00000340954 FAM227BQ96M60 508 aa12.77□□□□□ -0.37
STAU1-201ENST00000340954 GLRX3O76003 335 aaKnown RBP12.77□□□□□ -0.37
STAU1-201ENST00000340954 TCEANC2Q96MN5 208 aa12.77□□□□□ -0.37
STAU1-201ENST00000340954 GBP4Q96PP9 640 aa12.77□□□□□ -0.37
STAU1-201ENST00000340954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.77□□□□□ -0.371e-9■■□□□ 14.2
STAU1-201ENST00000340954 NCAPD2Q15021 1401 aa12.76□□□□□ -0.37
STAU1-201ENST00000340954 ACSBG1Q96GR2 724 aa12.76□□□□□ -0.37
STAU1-201ENST00000340954 PRPF40BQ6NWY9 871 aaKnown RBP12.76□□□□□ -0.37
STAU1-201ENST00000340954 DNAJC10Q8IXB1 793 aa12.76□□□□□ -0.37
STAU1-201ENST00000340954 TMX3Q96JJ7 454 aa12.76□□□□□ -0.37
STAU1-201ENST00000340954 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
STAU1-201ENST00000340954 HDAC5Q9UQL6 1122 aa12.75□□□□□ -0.37
STAU1-201ENST00000340954 AK9Q5TCS8 1911 aa12.75□□□□□ -0.37
STAU1-201ENST00000340954 PTH1RQ03431 593 aa12.75□□□□□ -0.37
STAU1-201ENST00000340954 SLFNL1Q499Z3 407 aa12.75□□□□□ -0.37
STAU1-201ENST00000340954 RASEFQ8IZ41 740 aa12.75□□□□□ -0.37
STAU1-201ENST00000340954 SYNE4Q8N205 404 aa12.75□□□□□ -0.37
STAU1-201ENST00000340954 SOS2Q07890 1332 aaPredicted RBP12.75□□□□□ -0.37
STAU1-201ENST00000340954 CAMTA1Q9Y6Y1 1673 aa12.75□□□□□ -0.37
STAU1-201ENST00000340954 TIMM10P62072 90 aa12.75□□□□□ -0.37
STAU1-201ENST00000340954 CCDC82Q8N4S0 544 aa12.75□□□□□ -0.37
STAU1-201ENST00000340954 FAM89AQ96GI7 184 aa12.75□□□□□ -0.37
STAU1-201ENST00000340954 HEG1Q9ULI3 1381 aa12.74□□□□□ -0.37
STAU1-201ENST00000340954 RAB3GAP1Q15042 981 aa12.74□□□□□ -0.37
STAU1-201ENST00000340954 ERC1Q8IUD2 1116 aa12.74□□□□□ -0.37
STAU1-201ENST00000340954 RRAGDQ9NQL2 400 aaPredicted RBP12.74□□□□□ -0.37
STAU1-201ENST00000340954 DDX46Q7L014 1031 aaKnown RBP12.73□□□□□ -0.37
STAU1-201ENST00000340954 PIGBQ92521 554 aa12.73□□□□□ -0.37
STAU1-201ENST00000340954 CARD10Q9BWT7 1032 aa12.73□□□□□ -0.37
STAU1-201ENST00000340954 DDX49Q9Y6V7 483 aaKnown RBP12.73□□□□□ -0.37
STAU1-201ENST00000340954 SGSM2O43147 1006 aa12.73□□□□□ -0.37
STAU1-201ENST00000340954 BRD1O95696 1058 aa12.73□□□□□ -0.37
STAU1-201ENST00000340954 CASTP20810 708 aaKnown RBP12.73□□□□□ -0.37
STAU1-201ENST00000340954 PLBD2Q8NHP8 589 aa12.73□□□□□ -0.37
STAU1-201ENST00000340954 DBNDD2Q9BQY9 259 aa12.73□□□□□ -0.37
STAU1-201ENST00000340954 NMIQ13287 307 aaPredicted RBP12.72□□□□□ -0.37
STAU1-201ENST00000340954 TBC1D2BQ9UPU7 963 aa12.72□□□□□ -0.37
STAU1-201ENST00000340954 KIF1AQ12756 1690 aa12.72□□□□□ -0.37
STAU1-201ENST00000340954 DDX11L8A8MPP1 907 aa12.72□□□□□ -0.37
STAU1-201ENST00000340954 GOLGA6L22H0YM25 854 aa12.72□□□□□ -0.37
STAU1-201ENST00000340954 PRPF40AO75400 957 aaKnown RBP12.72□□□□□ -0.37
STAU1-201ENST00000340954 JAKMIP1Q96N16 626 aaKnown RBP12.72□□□□□ -0.37
STAU1-201ENST00000340954 CWC25Q9NXE8 425 aaPredicted RBP12.72□□□□□ -0.37
STAU1-201ENST00000340954 PXDNLA1KZ92 1463 aa12.72□□□□□ -0.37
STAU1-201ENST00000340954 PTPN12Q05209 780 aaKnown RBP12.72□□□□□ -0.37
STAU1-201ENST00000340954 CCDC129Q6ZRS4 1044 aa12.72□□□□□ -0.37
STAU1-201ENST00000340954 GDPD2Q9HCC8 539 aa12.72□□□□□ -0.37
STAU1-201ENST00000340954 SNRKQ9NRH2 765 aa12.72□□□□□ -0.37
STAU1-201ENST00000340954 DCCP43146 1447 aa12.72□□□□□ -0.37
STAU1-201ENST00000340954 GOLGA6L3A6NEY3 463 aa12.71□□□□□ -0.37
STAU1-201ENST00000340954 BAG4O95429 457 aaKnown RBP12.71□□□□□ -0.37
STAU1-201ENST00000340954 MTX1Q13505 466 aa12.71□□□□□ -0.37
STAU1-201ENST00000340954 ADCK5Q3MIX3 580 aa12.71□□□□□ -0.37
STAU1-201ENST00000340954 LRRC24Q50LG9 513 aa12.71□□□□□ -0.37
STAU1-201ENST00000340954 LRP10Q7Z4F1 713 aa12.71□□□□□ -0.37
STAU1-201ENST00000340954 LMO7Q8WWI1 1683 aa12.71□□□□□ -0.37
STAU1-201ENST00000340954 SEC62Q99442 399 aaKnown RBP12.71□□□□□ -0.37
STAU1-201ENST00000340954 PANK2Q9BZ23 570 aa12.71□□□□□ -0.37
STAU1-201ENST00000340954 PUS3Q9BZE2 481 aaKnown RBP12.71□□□□□ -0.37
STAU1-201ENST00000340954 LMTK3Q96Q04 1460 aa12.71□□□□□ -0.38
STAU1-201ENST00000340954 PRIM1P49642 420 aaKnown RBP12.71□□□□□ -0.38
STAU1-201ENST00000340954 DBNLQ9UJU6 430 aaKnown RBP12.71□□□□□ -0.38
STAU1-201ENST00000340954 SNX14Q9Y5W7 946 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms