RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 CLEC4GQ6UXB4 293 aa16.74■□□□□ 0.27
GTF2F2-201ENST00000340473 NLRP10Q86W26 655 aa16.74■□□□□ 0.27
GTF2F2-201ENST00000340473 IGHDP01880 384 aa16.74■□□□□ 0.27
GTF2F2-201ENST00000340473 UBE3BQ7Z3V4 1068 aa16.74■□□□□ 0.27
GTF2F2-201ENST00000340473 SIRT2Q8IXJ6 389 aa16.74■□□□□ 0.27
GTF2F2-201ENST00000340473 ANO8Q9HCE9 1232 aaPredicted RBP16.74■□□□□ 0.27
GTF2F2-201ENST00000340473 ZNF652Q9Y2D9 606 aa16.74■□□□□ 0.27
GTF2F2-201ENST00000340473 CASP7P55210 303 aa16.73■□□□□ 0.27
GTF2F2-201ENST00000340473 CEP85Q6P2H3 762 aa16.73■□□□□ 0.27
GTF2F2-201ENST00000340473 H7C1W4 665 aa16.73■□□□□ 0.27
GTF2F2-201ENST00000340473 RGL2O15211 777 aa16.73■□□□□ 0.27
GTF2F2-201ENST00000340473 SUCLG2Q96I99 432 aa16.73■□□□□ 0.27
GTF2F2-201ENST00000340473 RTL5Q5HYW3 569 aaPredicted RBP16.72■□□□□ 0.27
GTF2F2-201ENST00000340473 KAZALD1Q96I82 304 aa16.72■□□□□ 0.27
GTF2F2-201ENST00000340473 NIP7Q9Y221 180 aaKnown RBP eCLIP16.72■□□□□ 0.27
GTF2F2-201ENST00000340473 TBC1D9BQ66K14 1250 aa16.72■□□□□ 0.27
GTF2F2-201ENST00000340473 ANKRD44Q8N8A2 993 aa16.72■□□□□ 0.27
GTF2F2-201ENST00000340473 KDM2BQ8NHM5 1336 aa16.71■□□□□ 0.27
GTF2F2-201ENST00000340473 HDAC1Q13547 482 aaPredicted RBP16.71■□□□□ 0.27
GTF2F2-201ENST00000340473 RPAP2Q8IXW5 612 aaPredicted RBP16.71■□□□□ 0.27
GTF2F2-201ENST00000340473 SUSD4Q5VX71 490 aa16.7■□□□□ 0.26
GTF2F2-201ENST00000340473 COL23A1Q86Y22 540 aaPredicted RBP16.7■□□□□ 0.26
GTF2F2-201ENST00000340473 UPF1Q92900 1129 aaKnown RBP eCLIP16.7■□□□□ 0.26
GTF2F2-201ENST00000340473 RWDD1Q9H446 243 aaPredicted RBP16.7■□□□□ 0.26
GTF2F2-201ENST00000340473 PCCAP05165 728 aaPredicted RBP16.7■□□□□ 0.26
GTF2F2-201ENST00000340473 SLC15A2Q16348 729 aa16.7■□□□□ 0.26
GTF2F2-201ENST00000340473 EPHA10Q5JZY3 1008 aa16.7■□□□□ 0.26
GTF2F2-201ENST00000340473 BICDL1Q6ZP65 573 aa16.7■□□□□ 0.26
GTF2F2-201ENST00000340473 ZBTB38Q8NAP3 1195 aaPredicted RBP16.7■□□□□ 0.26
GTF2F2-201ENST00000340473 FAM89AQ96GI7 184 aa16.7■□□□□ 0.26
GTF2F2-201ENST00000340473 PNPLA7Q6ZV29 1317 aa16.7■□□□□ 0.26
GTF2F2-201ENST00000340473 PARP10Q53GL7 1025 aa16.69■□□□□ 0.26
GTF2F2-201ENST00000340473 SYNE4Q8N205 404 aa16.69■□□□□ 0.26
GTF2F2-201ENST00000340473 BICC1Q9H694 974 aaKnown RBP16.69■□□□□ 0.26
GTF2F2-201ENST00000340473 PNMA6EA0A0J9YXQ4 647 aa16.69■□□□□ 0.26
GTF2F2-201ENST00000340473 FAM177BA6PVY3 158 aa16.69■□□□□ 0.26
GTF2F2-201ENST00000340473 GYS1P13807 737 aa16.69■□□□□ 0.26
GTF2F2-201ENST00000340473 STK32BQ9NY57 414 aa16.69■□□□□ 0.26
GTF2F2-201ENST00000340473 TRMT112Q9UI30 125 aaKnown RBP16.69■□□□□ 0.26
GTF2F2-201ENST00000340473 HDAC5Q9UQL6 1122 aa16.69■□□□□ 0.26
GTF2F2-201ENST00000340473 ATP8B2P98198 1209 aa16.68■□□□□ 0.26
GTF2F2-201ENST00000340473 CENPQQ7L2Z9 268 aaPredicted RBP16.68■□□□□ 0.26
GTF2F2-201ENST00000340473 UTP14AQ9BVJ6 771 aaKnown RBP16.68■□□□□ 0.26
GTF2F2-201ENST00000340473 COL24A1Q17RW2 1714 aa16.68■□□□□ 0.26
GTF2F2-201ENST00000340473 NTSR2O95665 410 aa16.67■□□□□ 0.26
GTF2F2-201ENST00000340473 PPP1R42Q7Z4L9 355 aa16.67■□□□□ 0.26
GTF2F2-201ENST00000340473 FLAD1Q8NFF5 587 aa16.67■□□□□ 0.26
GTF2F2-201ENST00000340473 MSH5O43196 834 aa16.66■□□□□ 0.26
GTF2F2-201ENST00000340473 SETDB2Q96T68 719 aa16.66■□□□□ 0.26
GTF2F2-201ENST00000340473 CDHR2Q9BYE9 1310 aa16.66■□□□□ 0.26
GTF2F2-201ENST00000340473 QSER1Q2KHR3 1735 aa16.66■□□□□ 0.26
GTF2F2-201ENST00000340473 FOXO4P98177 505 aa16.66■□□□□ 0.26
GTF2F2-201ENST00000340473 MTX1Q13505 466 aa16.66■□□□□ 0.26
GTF2F2-201ENST00000340473 NFIXQ14938 502 aa16.66■□□□□ 0.26
GTF2F2-201ENST00000340473 SRGAP3O43295 1099 aa16.65■□□□□ 0.26
GTF2F2-201ENST00000340473 SH3TC1Q8TE82 1336 aa16.65■□□□□ 0.26
GTF2F2-201ENST00000340473 HMMRO75330 724 aa16.65■□□□□ 0.26
GTF2F2-201ENST00000340473 POLA2Q14181 598 aa16.65■□□□□ 0.26
GTF2F2-201ENST00000340473 RABL6Q3YEC7 729 aaPredicted RBP16.65■□□□□ 0.26
GTF2F2-201ENST00000340473 ILDR2Q71H61 639 aa16.65■□□□□ 0.26
GTF2F2-201ENST00000340473 NUTM1Q86Y26 1132 aa16.65■□□□□ 0.26
GTF2F2-201ENST00000340473 SSH3Q8TE77 659 aa16.65■□□□□ 0.26
GTF2F2-201ENST00000340473 IRS4O14654 1257 aaPredicted RBP16.64■□□□□ 0.25
GTF2F2-201ENST00000340473 PLA2G12BQ9BX93 195 aa16.64■□□□□ 0.25
GTF2F2-201ENST00000340473 CARMIL3Q8ND23 1372 aa16.63■□□□□ 0.25
GTF2F2-201ENST00000340473 LMBR1LQ6UX01 489 aa16.63■□□□□ 0.25
GTF2F2-201ENST00000340473 SMC5Q8IY18 1101 aa16.63■□□□□ 0.25
GTF2F2-201ENST00000340473 DDX60Q8IY21 1712 aaKnown RBP16.63■□□□□ 0.25
GTF2F2-201ENST00000340473 TM4SF1P30408 202 aa16.62■□□□□ 0.25
GTF2F2-201ENST00000340473 ERFEQ4G0M1 354 aa16.62■□□□□ 0.25
GTF2F2-201ENST00000340473 NBPF5PQ86XG9 351 aaPredicted RBP16.62■□□□□ 0.25
GTF2F2-201ENST00000340473 DCTPP1Q9H773 170 aa16.62■□□□□ 0.25
GTF2F2-201ENST00000340473 HCLS1P14317 486 aaPredicted RBP16.62■□□□□ 0.25
GTF2F2-201ENST00000340473 LAMB2P55268 1798 aa16.61■□□□□ 0.25
GTF2F2-201ENST00000340473 PDGFDQ9GZP0 370 aaPredicted RBP16.61■□□□□ 0.25
GTF2F2-201ENST00000340473 NYXQ9GZU5 481 aa16.61■□□□□ 0.25
GTF2F2-201ENST00000340473 PDE8AO60658 829 aa16.61■□□□□ 0.25
GTF2F2-201ENST00000340473 DDR1Q08345 913 aa16.61■□□□□ 0.25
GTF2F2-201ENST00000340473 GCC1Q96CN9 775 aa16.61■□□□□ 0.25
GTF2F2-201ENST00000340473 MYH3P11055 1940 aa16.61■□□□□ 0.25
GTF2F2-201ENST00000340473 ABCC12Q96J65 1359 aa16.61■□□□□ 0.25
GTF2F2-201ENST00000340473 CTSWP56202 376 aa16.6■□□□□ 0.25
GTF2F2-201ENST00000340473 MSL1Q68DK7 614 aa16.6■□□□□ 0.25
GTF2F2-201ENST00000340473 SKAP1Q86WV1 359 aa16.6■□□□□ 0.25
GTF2F2-201ENST00000340473 NLGN1Q8N2Q7 840 aa16.6■□□□□ 0.25
GTF2F2-201ENST00000340473 EXOC6BQ9Y2D4 811 aa16.6■□□□□ 0.25
GTF2F2-201ENST00000340473 CHMP3Q9Y3E7 222 aa16.6■□□□□ 0.25
GTF2F2-201ENST00000340473 POLRMTO00411 1230 aaKnown RBP16.6■□□□□ 0.25
GTF2F2-201ENST00000340473 CSF1RP07333 972 aa16.6■□□□□ 0.25
GTF2F2-201ENST00000340473 RFX5P48382 616 aaPredicted RBP16.6■□□□□ 0.25
GTF2F2-201ENST00000340473 TPTE2Q6XPS3 522 aa16.6■□□□□ 0.25
GTF2F2-201ENST00000340473 CCDC24Q8N4L8 307 aa16.6■□□□□ 0.25
GTF2F2-201ENST00000340473 TTLL11Q8NHH1 800 aa16.6■□□□□ 0.25
GTF2F2-201ENST00000340473 CCDC85AQ96PX6 553 aaPredicted RBP16.6■□□□□ 0.25
GTF2F2-201ENST00000340473 PA2G4Q9UQ80 394 aaKnown RBP16.6■□□□□ 0.25
GTF2F2-201ENST00000340473 GTF2E1P29083 439 aaPredicted RBP16.59■□□□□ 0.25
GTF2F2-201ENST00000340473 KLHDC4Q8TBB5 520 aa16.59■□□□□ 0.25
GTF2F2-201ENST00000340473 FAM161AQ3B820 660 aa16.58■□□□□ 0.25
GTF2F2-201ENST00000340473 PDZRN3Q9UPQ7 1066 aa16.58■□□□□ 0.25
GTF2F2-201ENST00000340473 SURF6O75683 361 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 1277.1 ms