RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 MCCP23508 829 aa15.77■□□□□ 0.11
CDK5RAP1-201ENST00000339269 CABP4P57796 275 aa15.77■□□□□ 0.11
CDK5RAP1-201ENST00000339269 EVA1CP58658 441 aa15.77■□□□□ 0.11
CDK5RAP1-201ENST00000339269 RBM6P78332 1123 aaKnown RBP15.77■□□□□ 0.11
CDK5RAP1-201ENST00000339269 NBPF14Q5TI25 921 aa15.77■□□□□ 0.11
CDK5RAP1-201ENST00000339269 NBPF10Q6P3W6 841 aaKnown RBP15.77■□□□□ 0.11
CDK5RAP1-201ENST00000339269 ANKRD13DQ6ZTN6 518 aa15.77■□□□□ 0.11
CDK5RAP1-201ENST00000339269 RASEFQ8IZ41 740 aa15.77■□□□□ 0.11
CDK5RAP1-201ENST00000339269 NBPF15Q8N660 670 aa15.77■□□□□ 0.11
CDK5RAP1-201ENST00000339269 UPF3BQ9BZI7 483 aaKnown RBP15.77■□□□□ 0.11
CDK5RAP1-201ENST00000339269 AACSQ86V21 672 aa15.76■□□□□ 0.11
CDK5RAP1-201ENST00000339269 GAS2L3Q86XJ1 694 aa15.76■□□□□ 0.11
CDK5RAP1-201ENST00000339269 HDAC5Q9UQL6 1122 aa15.76■□□□□ 0.11
CDK5RAP1-201ENST00000339269 SNX14Q9Y5W7 946 aa15.76■□□□□ 0.11
CDK5RAP1-201ENST00000339269 NKX1-1Q15270 411 aaPredicted RBP15.76■□□□□ 0.11
CDK5RAP1-201ENST00000339269 VPS72Q15906 364 aa15.76■□□□□ 0.11
CDK5RAP1-201ENST00000339269 RABL6Q3YEC7 729 aaPredicted RBP15.76■□□□□ 0.11
CDK5RAP1-201ENST00000339269 TTC5Q8N0Z6 440 aa15.76■□□□□ 0.11
CDK5RAP1-201ENST00000339269 JARID2Q92833 1246 aaPredicted RBP15.76■□□□□ 0.11
CDK5RAP1-201ENST00000339269 CHAMP1Q96JM3 812 aa15.76■□□□□ 0.11
CDK5RAP1-201ENST00000339269 GJD4Q96KN9 370 aaPredicted RBP15.76■□□□□ 0.11
CDK5RAP1-201ENST00000339269 TTC14Q96N46 770 aa15.76■□□□□ 0.11
CDK5RAP1-201ENST00000339269 TNS2Q63HR2 1409 aa15.75■□□□□ 0.11
CDK5RAP1-201ENST00000339269 GOLGA6L3A6NEY3 463 aa15.75■□□□□ 0.11
CDK5RAP1-201ENST00000339269 MCM2P49736 904 aa15.75■□□□□ 0.11
CDK5RAP1-201ENST00000339269 L1TD1Q5T7N2 865 aaKnown RBP15.75■□□□□ 0.11
CDK5RAP1-201ENST00000339269 CWC27Q6UX04 472 aaKnown RBP15.75■□□□□ 0.11
CDK5RAP1-201ENST00000339269 PANK2Q9BZ23 570 aa15.75■□□□□ 0.11
CDK5RAP1-201ENST00000339269 LMBRD1Q9NUN5 540 aa15.75■□□□□ 0.11
CDK5RAP1-201ENST00000339269 PTH1RQ03431 593 aa15.74■□□□□ 0.11
CDK5RAP1-201ENST00000339269 ZCRB1Q8TBF4 217 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP1-201ENST00000339269 KCNB2Q92953 911 aa15.74■□□□□ 0.11
CDK5RAP1-201ENST00000339269 PCDH11XQ9BZA7 1347 aa15.74■□□□□ 0.11
CDK5RAP1-201ENST00000339269 PCDH11YQ9BZA8 1340 aa15.74■□□□□ 0.11
CDK5RAP1-201ENST00000339269 IFIT2P09913 472 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP1-201ENST00000339269 NEXNQ0ZGT2 675 aa15.74■□□□□ 0.11
CDK5RAP1-201ENST00000339269 CCDC8Q9H0W5 538 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP1-201ENST00000339269 SIL1Q9H173 461 aa15.74■□□□□ 0.11
CDK5RAP1-201ENST00000339269 NUP188Q5SRE5 1749 aa15.73■□□□□ 0.11
CDK5RAP1-201ENST00000339269 TOGARAM1Q9Y4F4 1720 aa15.73■□□□□ 0.11
CDK5RAP1-201ENST00000339269 PTMSP20962 102 aa15.73■□□□□ 0.11
CDK5RAP1-201ENST00000339269 PTPN12Q05209 780 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP1-201ENST00000339269 SKOR2Q2VWA4 1001 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP1-201ENST00000339269 INTS4Q96HW7 963 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP1-201ENST00000339269 COPRSQ9NQ92 184 aa15.73■□□□□ 0.11
CDK5RAP1-201ENST00000339269 ATP5J2-PTCD1G3V325 749 aa15.72■□□□□ 0.11
CDK5RAP1-201ENST00000339269 PTCD1O75127 700 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP1-201ENST00000339269 BRD1O95696 1058 aa15.72■□□□□ 0.11
CDK5RAP1-201ENST00000339269 TJP1Q07157 1748 aa15.72■□□□□ 0.11
CDK5RAP1-201ENST00000339269 G3BP1Q13283 466 aaKnown RBP eCLIP15.72■□□□□ 0.11
CDK5RAP1-201ENST00000339269 TOM1L2Q6ZVM7 507 aa15.72■□□□□ 0.11
CDK5RAP1-201ENST00000339269 PLBD2Q8NHP8 589 aa15.72■□□□□ 0.11
CDK5RAP1-201ENST00000339269 CARD10Q9BWT7 1032 aa15.72■□□□□ 0.11
CDK5RAP1-201ENST00000339269 SNRKQ9NRH2 765 aa15.72■□□□□ 0.11
CDK5RAP1-201ENST00000339269 AFDNP55196 1824 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP1-201ENST00000339269 BRWD3Q6RI45 1802 aa15.72■□□□□ 0.11
CDK5RAP1-201ENST00000339269 ERVV-2B6SEH9 535 aa15.71■□□□□ 0.11
CDK5RAP1-201ENST00000339269 KLHL40Q2TBA0 621 aa15.71■□□□□ 0.11
CDK5RAP1-201ENST00000339269 NOL8Q76FK4 1167 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP1-201ENST00000339269 EVI5LQ96CN4 794 aa15.71■□□□□ 0.11
CDK5RAP1-201ENST00000339269 ERBB4Q15303 1308 aa15.71■□□□□ 0.11
CDK5RAP1-201ENST00000339269 SPATA31A5Q5VU36 1347 aa15.71■□□□□ 0.11
CDK5RAP1-201ENST00000339269 SPATA31A7Q8IWB4 1347 aa15.71■□□□□ 0.11
CDK5RAP1-201ENST00000339269 MCTP1Q6DN14 999 aa15.71■□□□□ 0.11
CDK5RAP1-201ENST00000339269 TTLL7Q6ZT98 887 aa15.71■□□□□ 0.11
CDK5RAP1-201ENST00000339269 UBE3BQ7Z3V4 1068 aa15.71■□□□□ 0.11
CDK5RAP1-201ENST00000339269 FAM227BQ96M60 508 aa15.71■□□□□ 0.11
CDK5RAP1-201ENST00000339269 ARXQ96QS3 562 aa15.71■□□□□ 0.11
CDK5RAP1-201ENST00000339269 RTN4Q9NQC3 1192 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP1-201ENST00000339269 COL9A3Q14050 684 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP1-201ENST00000339269 GPATCH3Q96I76 525 aa15.7■□□□□ 0.1
CDK5RAP1-201ENST00000339269 SPATA31A1Q5TZJ5 1347 aa15.7■□□□□ 0.1
CDK5RAP1-201ENST00000339269 WNK3Q9BYP7 1800 aa15.7■□□□□ 0.1
CDK5RAP1-201ENST00000339269 IL2RBP14784 551 aa15.69■□□□□ 0.1
CDK5RAP1-201ENST00000339269 FOXO4P98177 505 aa15.69■□□□□ 0.1
CDK5RAP1-201ENST00000339269 RUFY3Q7L099 469 aa15.69■□□□□ 0.1
CDK5RAP1-201ENST00000339269 DIAPH3Q9NSV4 1193 aa15.69■□□□□ 0.1
CDK5RAP1-201ENST00000339269 DBNLQ9UJU6 430 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP1-201ENST00000339269 RPAP1Q9BWH6 1393 aaPredicted RBP15.69■□□□□ 0.1
CDK5RAP1-201ENST00000339269 MED23Q9ULK4 1368 aa15.69■□□□□ 0.1
CDK5RAP1-201ENST00000339269 A0A0G2JS52 829 aa15.69■□□□□ 0.1
CDK5RAP1-201ENST00000339269 H7C1W4 665 aa15.69■□□□□ 0.1
CDK5RAP1-201ENST00000339269 A1BGP04217 495 aa15.69■□□□□ 0.1
CDK5RAP1-201ENST00000339269 CPA1P15085 419 aa15.69■□□□□ 0.1
CDK5RAP1-201ENST00000339269 NMIQ13287 307 aaPredicted RBP15.69■□□□□ 0.1
CDK5RAP1-201ENST00000339269 FAM98CQ17RN3 349 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP1-201ENST00000339269 GRPEL1Q9HAV7 217 aa15.69■□□□□ 0.1
CDK5RAP1-201ENST00000339269 A0A087WZG4 1122 aa15.68■□□□□ 0.1
CDK5RAP1-201ENST00000339269 A0A0D9SFI3 127 aa15.68■□□□□ 0.1
CDK5RAP1-201ENST00000339269 MRE11P49959 708 aa15.68■□□□□ 0.1
CDK5RAP1-201ENST00000339269 AK2P54819 239 aa15.68■□□□□ 0.1
CDK5RAP1-201ENST00000339269 NECTIN1Q15223 517 aa15.68■□□□□ 0.1
CDK5RAP1-201ENST00000339269 ADCK5Q3MIX3 580 aa15.68■□□□□ 0.1
CDK5RAP1-201ENST00000339269 ISY1Q9ULR0 285 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP1-201ENST00000339269 CCDC171Q6TFL3 1326 aa15.68■□□□□ 0.1
CDK5RAP1-201ENST00000339269 TFCP2Q12800 502 aa15.67■□□□□ 0.1
CDK5RAP1-201ENST00000339269 GPT2Q8TD30 523 aa15.67■□□□□ 0.1
CDK5RAP1-201ENST00000339269 EDC3Q96F86 508 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP1-201ENST00000339269 BOLA2Q9H3K6 86 aa15.67■□□□□ 0.1
CDK5RAP1-201ENST00000339269 GOLGA6L22H0YM25 854 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms