RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 LAMB2P55268 1798 aa18.2■□□□□ 0.5
NIPAL3-202ENST00000339255 B4GALNT3Q6L9W6 998 aa18.19■□□□□ 0.5
NIPAL3-202ENST00000339255 RWDD1Q9H446 243 aaPredicted RBP18.19■□□□□ 0.5
NIPAL3-202ENST00000339255 GPTP24298 496 aa18.18■□□□□ 0.5
NIPAL3-202ENST00000339255 USPL1Q5W0Q7 1092 aa18.18■□□□□ 0.5
NIPAL3-202ENST00000339255 UBE3BQ7Z3V4 1068 aa18.18■□□□□ 0.5
NIPAL3-202ENST00000339255 ZBTB38Q8NAP3 1195 aaPredicted RBP18.18■□□□□ 0.5
NIPAL3-202ENST00000339255 C1orf115Q9H7X2 142 aa18.18■□□□□ 0.5
NIPAL3-202ENST00000339255 STK32BQ9NY57 414 aa18.18■□□□□ 0.5
NIPAL3-202ENST00000339255 LRRFIP2Q9Y608 721 aaKnown RBP18.18■□□□□ 0.5
NIPAL3-202ENST00000339255 H7C1W4 665 aa18.18■□□□□ 0.5
NIPAL3-202ENST00000339255 HMMRO75330 724 aa18.18■□□□□ 0.5
NIPAL3-202ENST00000339255 PCCAP05165 728 aaPredicted RBP18.18■□□□□ 0.5
NIPAL3-202ENST00000339255 DEFB132Q7Z7B7 95 aa18.18■□□□□ 0.5
NIPAL3-202ENST00000339255 ANKRD44Q8N8A2 993 aa18.18■□□□□ 0.5
NIPAL3-202ENST00000339255 NIP7Q9Y221 180 aaKnown RBP eCLIP18.18■□□□□ 0.5
NIPAL3-202ENST00000339255 UBN2Q6ZU65 1347 aa18.17■□□□□ 0.5
NIPAL3-202ENST00000339255 CEP85Q6P2H3 762 aa18.17■□□□□ 0.5
NIPAL3-202ENST00000339255 CENPQQ7L2Z9 268 aaPredicted RBP18.17■□□□□ 0.5
NIPAL3-202ENST00000339255 PPP1R42Q7Z4L9 355 aa18.17■□□□□ 0.5
NIPAL3-202ENST00000339255 BCL2L12Q9HB09 334 aa18.17■□□□□ 0.5
NIPAL3-202ENST00000339255 SRP68Q9UHB9 627 aaKnown RBP18.17■□□□□ 0.5
NIPAL3-202ENST00000339255 HSP90B1P14625 803 aaKnown RBP18.16■□□□□ 0.5
NIPAL3-202ENST00000339255 CASP7P55210 303 aa18.16■□□□□ 0.5
NIPAL3-202ENST00000339255 SLC15A2Q16348 729 aa18.16■□□□□ 0.5
NIPAL3-202ENST00000339255 CDHR2Q9BYE9 1310 aa18.16■□□□□ 0.5
NIPAL3-202ENST00000339255 MTX1Q13505 466 aa18.15■□□□□ 0.5
NIPAL3-202ENST00000339255 SMIM5Q71RC9 77 aa18.15■□□□□ 0.5
NIPAL3-202ENST00000339255 CARMIL3Q8ND23 1372 aa18.15■□□□□ 0.5
NIPAL3-202ENST00000339255 SETDB2Q96T68 719 aa18.15■□□□□ 0.5
NIPAL3-202ENST00000339255 UTP14AQ9BVJ6 771 aaKnown RBP18.15■□□□□ 0.5
NIPAL3-202ENST00000339255 ANO8Q9HCE9 1232 aaPredicted RBP18.15■□□□□ 0.5
NIPAL3-202ENST00000339255 TRMT112Q9UI30 125 aaKnown RBP18.15■□□□□ 0.5
NIPAL3-202ENST00000339255 PNPLA7Q6ZV29 1317 aa18.14■□□□□ 0.49
NIPAL3-202ENST00000339255 KDM2BQ8NHM5 1336 aa18.14■□□□□ 0.49
NIPAL3-202ENST00000339255 SH3TC1Q8TE82 1336 aa18.14■□□□□ 0.49
NIPAL3-202ENST00000339255 UPF1Q92900 1129 aaKnown RBP eCLIP18.14■□□□□ 0.49
NIPAL3-202ENST00000339255 NYXQ9GZU5 481 aa18.14■□□□□ 0.49
NIPAL3-202ENST00000339255 DDX60Q8IY21 1712 aaKnown RBP18.13■□□□□ 0.49
NIPAL3-202ENST00000339255 GYS1P13807 737 aa18.13■□□□□ 0.49
NIPAL3-202ENST00000339255 ATP8B2P98198 1209 aa18.13■□□□□ 0.49
NIPAL3-202ENST00000339255 TBC1D9BQ66K14 1250 aa18.13■□□□□ 0.49
NIPAL3-202ENST00000339255 SIRT2Q8IXJ6 389 aa18.13■□□□□ 0.49
NIPAL3-202ENST00000339255 SUCLG2Q96I99 432 aa18.13■□□□□ 0.49
NIPAL3-202ENST00000339255 COL23A1Q86Y22 540 aaPredicted RBP18.12■□□□□ 0.49
NIPAL3-202ENST00000339255 KAZALD1Q96I82 304 aa18.12■□□□□ 0.49
NIPAL3-202ENST00000339255 PLA2G12BQ9BX93 195 aa18.12■□□□□ 0.49
NIPAL3-202ENST00000339255 BICC1Q9H694 974 aaKnown RBP18.12■□□□□ 0.49
NIPAL3-202ENST00000339255 NTSR2O95665 410 aa18.12■□□□□ 0.49
NIPAL3-202ENST00000339255 RABL6Q3YEC7 729 aaPredicted RBP18.12■□□□□ 0.49
NIPAL3-202ENST00000339255 SUSD4Q5VX71 490 aa18.12■□□□□ 0.49
NIPAL3-202ENST00000339255 NLGN1Q8N2Q7 840 aa18.12■□□□□ 0.49
NIPAL3-202ENST00000339255 FAM89AQ96GI7 184 aa18.12■□□□□ 0.49
NIPAL3-202ENST00000339255 CASZ1Q86V15 1759 aa18.11■□□□□ 0.49
NIPAL3-202ENST00000339255 IGHDP01880 384 aa18.11■□□□□ 0.49
NIPAL3-202ENST00000339255 SSH3Q8TE77 659 aa18.11■□□□□ 0.49
NIPAL3-202ENST00000339255 GCC1Q96CN9 775 aa18.11■□□□□ 0.49
NIPAL3-202ENST00000339255 MSH5O43196 834 aa18.1■□□□□ 0.49
NIPAL3-202ENST00000339255 SRGAP3O43295 1099 aa18.1■□□□□ 0.49
NIPAL3-202ENST00000339255 NBPF5PQ86XG9 351 aaPredicted RBP18.1■□□□□ 0.49
NIPAL3-202ENST00000339255 IRS4O14654 1257 aaPredicted RBP18.09■□□□□ 0.49
NIPAL3-202ENST00000339255 POLA2Q14181 598 aa18.09■□□□□ 0.49
NIPAL3-202ENST00000339255 NFIXQ14938 502 aa18.09■□□□□ 0.49
NIPAL3-202ENST00000339255 RTL5Q5HYW3 569 aaPredicted RBP18.09■□□□□ 0.49
NIPAL3-202ENST00000339255 TPTE2Q6XPS3 522 aa18.09■□□□□ 0.49
NIPAL3-202ENST00000339255 BICDL1Q6ZP65 573 aa18.09■□□□□ 0.49
NIPAL3-202ENST00000339255 PNMA6EA0A0J9YXQ4 647 aa18.09■□□□□ 0.49
NIPAL3-202ENST00000339255 FOXO4P98177 505 aa18.09■□□□□ 0.49
NIPAL3-202ENST00000339255 SMC5Q8IY18 1101 aa18.09■□□□□ 0.49
NIPAL3-202ENST00000339255 JARID2Q92833 1246 aaPredicted RBP18.09■□□□□ 0.49
NIPAL3-202ENST00000339255 NRXN2Q9P2S2 1712 aa18.08■□□□□ 0.49
NIPAL3-202ENST00000339255 RIC1Q4ADV7 1423 aa18.08■□□□□ 0.49
NIPAL3-202ENST00000339255 PDE8AO60658 829 aa18.08■□□□□ 0.48
NIPAL3-202ENST00000339255 GTF2E1P29083 439 aaPredicted RBP18.07■□□□□ 0.48
NIPAL3-202ENST00000339255 CTSWP56202 376 aa18.07■□□□□ 0.48
NIPAL3-202ENST00000339255 EPHA10Q5JZY3 1008 aa18.07■□□□□ 0.48
NIPAL3-202ENST00000339255 DCTPP1Q9H773 170 aa18.07■□□□□ 0.48
NIPAL3-202ENST00000339255 TM4SF1P30408 202 aa18.06■□□□□ 0.48
NIPAL3-202ENST00000339255 HSP90AB4PQ58FF6 505 aa18.06■□□□□ 0.48
NIPAL3-202ENST00000339255 LMBR1LQ6UX01 489 aa18.06■□□□□ 0.48
NIPAL3-202ENST00000339255 CNBD1Q8NA66 436 aa18.06■□□□□ 0.48
NIPAL3-202ENST00000339255 FAM177BA6PVY3 158 aa18.06■□□□□ 0.48
NIPAL3-202ENST00000339255 NPHP1O15259 732 aa18.06■□□□□ 0.48
NIPAL3-202ENST00000339255 SLC16A10Q8TF71 515 aa18.06■□□□□ 0.48
NIPAL3-202ENST00000339255 RTL9Q8NET4 1388 aa18.05■□□□□ 0.48
NIPAL3-202ENST00000339255 CSF1RP07333 972 aa18.05■□□□□ 0.48
NIPAL3-202ENST00000339255 SLC10A5Q5PT55 438 aa18.05■□□□□ 0.48
NIPAL3-202ENST00000339255 NUTM1Q86Y26 1132 aa18.04■□□□□ 0.48
NIPAL3-202ENST00000339255 SYNE4Q8N205 404 aa18.04■□□□□ 0.48
NIPAL3-202ENST00000339255 POLRMTO00411 1230 aaKnown RBP18.03■□□□□ 0.48
NIPAL3-202ENST00000339255 ERFEQ4G0M1 354 aa18.03■□□□□ 0.48
NIPAL3-202ENST00000339255 TTLL11Q8NHH1 800 aa18.03■□□□□ 0.48
NIPAL3-202ENST00000339255 NOP58Q9Y2X3 529 aaKnown RBP18.03■□□□□ 0.48
NIPAL3-202ENST00000339255 ABCC12Q96J65 1359 aa18.03■□□□□ 0.48
NIPAL3-202ENST00000339255 SERPINB2P05120 415 aa18.03■□□□□ 0.48
NIPAL3-202ENST00000339255 HCLS1P14317 486 aaPredicted RBP18.03■□□□□ 0.48
NIPAL3-202ENST00000339255 ST5P78524 1137 aa18.03■□□□□ 0.48
NIPAL3-202ENST00000339255 CCDC57Q2TAC2 916 aa18.03■□□□□ 0.48
NIPAL3-202ENST00000339255 CCDC152Q4G0S7 254 aa18.03■□□□□ 0.48
NIPAL3-202ENST00000339255 COPRSQ9NQ92 184 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms