RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 TEX13AQ9BXU3 409 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF3-202ENST00000338458 ECHDC1Q9NTX5 307 aa12.32□□□□□ -0.44
ARHGEF3-202ENST00000338458 ITGB4P16144 1822 aa12.32□□□□□ -0.44
ARHGEF3-202ENST00000338458 PLCH1Q4KWH8 1693 aa12.32□□□□□ -0.44
ARHGEF3-202ENST00000338458 ARFGEF2Q9Y6D5 1785 aa12.31□□□□□ -0.44
ARHGEF3-202ENST00000338458 MEX3CQ5U5Q3 659 aaKnown RBP12.31□□□□□ -0.44
ARHGEF3-202ENST00000338458 EDC3Q96F86 508 aaKnown RBP12.31□□□□□ -0.44
ARHGEF3-202ENST00000338458 NEUROD6Q96NK8 337 aa12.31□□□□□ -0.44
ARHGEF3-202ENST00000338458 H7C1W4 665 aa12.31□□□□□ -0.44
ARHGEF3-202ENST00000338458 CASP7P55210 303 aa12.31□□□□□ -0.44
ARHGEF3-202ENST00000338458 TCIRG1Q13488 830 aa12.31□□□□□ -0.44
ARHGEF3-202ENST00000338458 FOXO4P98177 505 aa12.31□□□□□ -0.44
ARHGEF3-202ENST00000338458 CNTROBQ8N137 903 aa12.31□□□□□ -0.44
ARHGEF3-202ENST00000338458 CCDC191Q8NCU4 936 aa12.3□□□□□ -0.44
ARHGEF3-202ENST00000338458 GPATCH3Q96I76 525 aa12.3□□□□□ -0.44
ARHGEF3-202ENST00000338458 COL22A1Q8NFW1 1626 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF3-202ENST00000338458 GLRX3O76003 335 aaKnown RBP12.3□□□□□ -0.44
ARHGEF3-202ENST00000338458 RFX5P48382 616 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF3-202ENST00000338458 DZIP3Q86Y13 1208 aaKnown RBP12.3□□□□□ -0.44
ARHGEF3-202ENST00000338458 VSIG10Q8N0Z9 540 aa12.3□□□□□ -0.44
ARHGEF3-202ENST00000338458 LAMB4A4D0S4 1761 aa12.3□□□□□ -0.44
ARHGEF3-202ENST00000338458 UBR2Q8IWV8 1755 aa12.3□□□□□ -0.44
ARHGEF3-202ENST00000338458 LRRC24Q50LG9 513 aa12.3□□□□□ -0.44
ARHGEF3-202ENST00000338458 CDCA7Q9BWT1 371 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF3-202ENST00000338458 PUS3Q9BZE2 481 aaKnown RBP12.3□□□□□ -0.44
ARHGEF3-202ENST00000338458 USP21Q9UK80 565 aa12.3□□□□□ -0.44
ARHGEF3-202ENST00000338458 PALD1Q9ULE6 856 aa12.29□□□□□ -0.44
ARHGEF3-202ENST00000338458 THRAP3Q9Y2W1 955 aaKnown RBP12.29□□□□□ -0.44
ARHGEF3-202ENST00000338458 DIAPH3Q9NSV4 1193 aa12.29□□□□□ -0.44
ARHGEF3-202ENST00000338458 LOC102724428A0A0B4J2F2 783 aa12.29□□□□□ -0.44
ARHGEF3-202ENST00000338458 SIK1P57059 783 aa12.29□□□□□ -0.44
ARHGEF3-202ENST00000338458 TIMM10P62072 90 aa12.29□□□□□ -0.44
ARHGEF3-202ENST00000338458 DNAJC2Q99543 621 aaKnown RBP12.29□□□□□ -0.44
ARHGEF3-202ENST00000338458 DBNDD2Q9BQY9 259 aa12.29□□□□□ -0.44
ARHGEF3-202ENST00000338458 MAP3K15Q6ZN16 1313 aa12.28□□□□□ -0.44
ARHGEF3-202ENST00000338458 ITPK1Q13572 414 aa12.28□□□□□ -0.44
ARHGEF3-202ENST00000338458 COPRSQ9NQ92 184 aa12.28□□□□□ -0.44
ARHGEF3-202ENST00000338458 RABL6Q3YEC7 729 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF3-202ENST00000338458 TAF7LQ5H9L4 462 aa12.28□□□□□ -0.44
ARHGEF3-202ENST00000338458 ISCA1Q9BUE6 129 aa12.28□□□□□ -0.44
ARHGEF3-202ENST00000338458 TRMT112Q9UI30 125 aaKnown RBP12.28□□□□□ -0.44
ARHGEF3-202ENST00000338458 CRKLP46109 303 aaKnown RBP12.28□□□□□ -0.44
ARHGEF3-202ENST00000338458 GIGYF2Q6Y7W6 1299 aaKnown RBP12.28□□□□□ -0.44
ARHGEF3-202ENST00000338458 DBNLQ9UJU6 430 aaKnown RBP12.28□□□□□ -0.44
ARHGEF3-202ENST00000338458 TTC41PQ6P2S7 1318 aa12.27□□□□□ -0.44
ARHGEF3-202ENST00000338458 TNNI3KQ59H18 835 aa12.27□□□□□ -0.44
ARHGEF3-202ENST00000338458 UPF3BQ9BZI7 483 aaKnown RBP12.27□□□□□ -0.44
ARHGEF3-202ENST00000338458 FPGT-TNNI3KV9GXZ4 949 aa12.27□□□□□ -0.44
ARHGEF3-202ENST00000338458 CHGBP05060 677 aa12.27□□□□□ -0.45
ARHGEF3-202ENST00000338458 HSPA1LP34931 641 aa12.27□□□□□ -0.45
ARHGEF3-202ENST00000338458 CCDC57Q2TAC2 916 aa12.27□□□□□ -0.45
ARHGEF3-202ENST00000338458 FSD1Q9BTV5 496 aa12.27□□□□□ -0.45
ARHGEF3-202ENST00000338458 DOT1LQ8TEK3 1739 aa12.27□□□□□ -0.45
ARHGEF3-202ENST00000338458 AOX1Q06278 1338 aa12.27□□□□□ -0.45
ARHGEF3-202ENST00000338458 NEK4P51957 841 aa12.26□□□□□ -0.45
ARHGEF3-202ENST00000338458 PAPPAQ13219 1627 aa12.26□□□□□ -0.45
ARHGEF3-202ENST00000338458 JCADQ9P266 1359 aa12.26□□□□□ -0.45
ARHGEF3-202ENST00000338458 FAM227BQ96M60 508 aa12.26□□□□□ -0.45
ARHGEF3-202ENST00000338458 ANTXR1Q9H6X2 564 aa12.26□□□□□ -0.45
ARHGEF3-202ENST00000338458 SLIT2O94813 1529 aa12.26□□□□□ -0.45
ARHGEF3-202ENST00000338458 K7ELQ4 463 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF3-202ENST00000338458 RABEP1Q15276 862 aa12.26□□□□□ -0.45
ARHGEF3-202ENST00000338458 NLRP10Q86W26 655 aa12.26□□□□□ -0.45
ARHGEF3-202ENST00000338458 PALLDQ8WX93 1383 aa12.26□□□□□ -0.45
ARHGEF3-202ENST00000338458 BARGINQ6ZT62 677 aa12.25□□□□□ -0.45
ARHGEF3-202ENST00000338458 KIAA1211Q6ZU35 1233 aa12.25□□□□□ -0.45
ARHGEF3-202ENST00000338458 CCDC87Q9NVE4 849 aa12.25□□□□□ -0.45
ARHGEF3-202ENST00000338458 CERKQ8TCT0 537 aa12.25□□□□□ -0.45
ARHGEF3-202ENST00000338458 HCLS1P14317 486 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF3-202ENST00000338458 BICDL1Q6ZP65 573 aa12.25□□□□□ -0.45
ARHGEF3-202ENST00000338458 ATG9AQ7Z3C6 839 aa12.25□□□□□ -0.45
ARHGEF3-202ENST00000338458 LARP6Q9BRS8 491 aaKnown RBP12.25□□□□□ -0.45
ARHGEF3-202ENST00000338458 MCCP23508 829 aa12.24□□□□□ -0.45
ARHGEF3-202ENST00000338458 INTS5Q6P9B9 1019 aaKnown RBP12.24□□□□□ -0.45
ARHGEF3-202ENST00000338458 DDX46Q7L014 1031 aaKnown RBP12.24□□□□□ -0.45
ARHGEF3-202ENST00000338458 SNX21Q969T3 373 aa12.24□□□□□ -0.45
ARHGEF3-202ENST00000338458 BCL9LQ86UU0 1499 aa12.24□□□□□ -0.45
ARHGEF3-202ENST00000338458 IRS4O14654 1257 aaPredicted RBP12.24□□□□□ -0.45
ARHGEF3-202ENST00000338458 SGSM2O43147 1006 aa12.24□□□□□ -0.45
ARHGEF3-202ENST00000338458 VPS72Q15906 364 aa12.24□□□□□ -0.45
ARHGEF3-202ENST00000338458 ZBTB38Q8NAP3 1195 aaPredicted RBP12.24□□□□□ -0.45
ARHGEF3-202ENST00000338458 NRAPQ86VF7 1730 aa12.24□□□□□ -0.45
ARHGEF3-202ENST00000338458 IL6STP40189 918 aaPredicted RBP12.24□□□□□ -0.45
ARHGEF3-202ENST00000338458 SLFNL1Q499Z3 407 aa12.24□□□□□ -0.45
ARHGEF3-202ENST00000338458 EVI5LQ96CN4 794 aa12.24□□□□□ -0.45
ARHGEF3-202ENST00000338458 GREM2Q9H772 168 aa12.24□□□□□ -0.45
ARHGEF3-202ENST00000338458 EYA2O00167 538 aa12.23□□□□□ -0.45
ARHGEF3-202ENST00000338458 EIF5BO60841 1220 aaKnown RBP12.23□□□□□ -0.45
ARHGEF3-202ENST00000338458 PCCAP05165 728 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF3-202ENST00000338458 KCNJ4P48050 445 aa12.23□□□□□ -0.45
ARHGEF3-202ENST00000338458 NMIQ13287 307 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF3-202ENST00000338458 IFIT5Q13325 482 aaKnown RBP12.23□□□□□ -0.45
ARHGEF3-202ENST00000338458 AK9Q5TCS8 1911 aa12.23□□□□□ -0.45
ARHGEF3-202ENST00000338458 PTH1RQ03431 593 aa12.23□□□□□ -0.45
ARHGEF3-202ENST00000338458 SNRKQ9NRH2 765 aa12.23□□□□□ -0.45
ARHGEF3-202ENST00000338458 UBN2Q6ZU65 1347 aa12.23□□□□□ -0.45
ARHGEF3-202ENST00000338458 ST18O60284 1047 aa12.23□□□□□ -0.45
ARHGEF3-202ENST00000338458 CPA1P15085 419 aa12.23□□□□□ -0.45
ARHGEF3-202ENST00000338458 GORABQ5T7V8 394 aa12.23□□□□□ -0.45
ARHGEF3-202ENST00000338458 USP42Q9H9J4 1324 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 206 ms