RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 STX6O43752 255 aa11.64□□□□□ -0.55
MSL3-202ENST00000337339 SYT1P21579 422 aa11.64□□□□□ -0.55
MSL3-202ENST00000337339 CCDC173Q0VFZ6 552 aa11.64□□□□□ -0.55
MSL3-202ENST00000337339 FAM173BQ6P4H8 233 aa11.64□□□□□ -0.55
MSL3-202ENST00000337339 LMBR1LQ6UX01 489 aa11.64□□□□□ -0.55
MSL3-202ENST00000337339 CCDC129Q6ZRS4 1044 aa11.64□□□□□ -0.55
MSL3-202ENST00000337339 LRRC2Q9BYS8 371 aa11.64□□□□□ -0.55
MSL3-202ENST00000337339 FER1L4A9Z1Z3 1794 aa11.64□□□□□ -0.55
MSL3-202ENST00000337339 A0A0D9SFI3 127 aa11.64□□□□□ -0.55
MSL3-202ENST00000337339 CYP27B1O15528 508 aa11.64□□□□□ -0.55
MSL3-202ENST00000337339 MBD3O95983 291 aa11.64□□□□□ -0.55
MSL3-202ENST00000337339 A1BGP04217 495 aa11.64□□□□□ -0.55
MSL3-202ENST00000337339 SYAP1Q96A49 352 aaPredicted RBP11.64□□□□□ -0.55
MSL3-202ENST00000337339 SYTL4Q96C24 671 aaPredicted RBP11.64□□□□□ -0.55
MSL3-202ENST00000337339 TOPAZ1Q8N9V7 1692 aa11.63□□□□□ -0.55
MSL3-202ENST00000337339 PDIA6Q15084 440 aa11.63□□□□□ -0.55
MSL3-202ENST00000337339 GORABQ5T7V8 394 aa11.63□□□□□ -0.55
MSL3-202ENST00000337339 BLOC1S2Q6QNY1 142 aa11.63□□□□□ -0.55
MSL3-202ENST00000337339 TMEM94Q12767 1356 aa11.63□□□□□ -0.55
MSL3-202ENST00000337339 AOX1Q06278 1338 aa11.63□□□□□ -0.55
MSL3-202ENST00000337339 GOLGA6L4A6NEF3 574 aa11.63□□□□□ -0.55
MSL3-202ENST00000337339 CUL4AQ13619 759 aa11.63□□□□□ -0.55
MSL3-202ENST00000337339 SLFNL1Q499Z3 407 aa11.63□□□□□ -0.55
MSL3-202ENST00000337339 LARP1BQ659C4 914 aaKnown RBP11.63□□□□□ -0.55
MSL3-202ENST00000337339 CREB3L3Q68CJ9 461 aa11.63□□□□□ -0.55
MSL3-202ENST00000337339 INTS4Q96HW7 963 aaKnown RBP11.63□□□□□ -0.55
MSL3-202ENST00000337339 SEC62Q99442 399 aaKnown RBP11.63□□□□□ -0.55
MSL3-202ENST00000337339 METTL22Q9BUU2 404 aaPredicted RBP11.63□□□□□ -0.55
MSL3-202ENST00000337339 TIMM10P62072 90 aa11.62□□□□□ -0.55
MSL3-202ENST00000337339 RNF20Q5VTR2 975 aa11.62□□□□□ -0.55
MSL3-202ENST00000337339 DBNDD2Q9BQY9 259 aa11.62□□□□□ -0.55
MSL3-202ENST00000337339 DNM1Q05193 864 aaKnown RBP11.62□□□□□ -0.55
MSL3-202ENST00000337339 COL9A3Q14050 684 aaPredicted RBP11.62□□□□□ -0.55
MSL3-202ENST00000337339 DDX11Q96FC9 970 aa11.62□□□□□ -0.55
MSL3-202ENST00000337339 CCDC171Q6TFL3 1326 aa11.62□□□□□ -0.55
MSL3-202ENST00000337339 TTLL7Q6ZT98 887 aa11.61□□□□□ -0.55
MSL3-202ENST00000337339 ZNF594Q96JF6 807 aaPredicted RBP11.61□□□□□ -0.55
MSL3-202ENST00000337339 DCAF5Q96JK2 942 aa11.61□□□□□ -0.55
MSL3-202ENST00000337339 NWD1Q149M9 1564 aa11.61□□□□□ -0.55
MSL3-202ENST00000337339 RGPD1P0DJD0 1748 aa11.61□□□□□ -0.55
MSL3-202ENST00000337339 ZSCAN22P10073 491 aaPredicted RBP11.61□□□□□ -0.55
MSL3-202ENST00000337339 CEBPZQ03701 1054 aaKnown RBP11.61□□□□□ -0.55
MSL3-202ENST00000337339 CLEC17AQ6ZS10 378 aa11.61□□□□□ -0.55
MSL3-202ENST00000337339 ZNF589Q86UQ0 364 aaPredicted RBP11.61□□□□□ -0.55
MSL3-202ENST00000337339 TAF6LQ9Y6J9 622 aa11.61□□□□□ -0.55
MSL3-202ENST00000337339 ME3Q16798 604 aa11.61□□□□□ -0.55
MSL3-202ENST00000337339 TAF7LQ5H9L4 462 aa11.61□□□□□ -0.55
MSL3-202ENST00000337339 TSPY26PQ9H489 355 aa11.61□□□□□ -0.55
MSL3-202ENST00000337339 SNRKQ9NRH2 765 aa11.61□□□□□ -0.55
MSL3-202ENST00000337339 TFIP11Q9UBB9 837 aaKnown RBP11.61□□□□□ -0.55
MSL3-202ENST00000337339 GOLIM4O00461 696 aa11.6□□□□□ -0.55
MSL3-202ENST00000337339 CLCN1P35523 988 aa11.6□□□□□ -0.55
MSL3-202ENST00000337339 ZNF445P59923 1031 aa11.6□□□□□ -0.55
MSL3-202ENST00000337339 FKBP4Q02790 459 aaKnown RBP eCLIP11.6□□□□□ -0.55
MSL3-202ENST00000337339 LRSAM1Q6UWE0 723 aa11.6□□□□□ -0.55
MSL3-202ENST00000337339 CADPS2Q86UW7 1296 aa11.6□□□□□ -0.55
MSL3-202ENST00000337339 PSMA5P28066 241 aa11.6□□□□□ -0.55
MSL3-202ENST00000337339 MTX1Q13505 466 aa11.6□□□□□ -0.55
MSL3-202ENST00000337339 DNTTIP2Q5QJE6 756 aaKnown RBP11.6□□□□□ -0.55
MSL3-202ENST00000337339 KLHL34Q8N239 644 aa11.6□□□□□ -0.55
MSL3-202ENST00000337339 DBNLQ9UJU6 430 aaKnown RBP11.6□□□□□ -0.55
MSL3-202ENST00000337339 ATP6V1DQ9Y5K8 247 aa11.6□□□□□ -0.55
MSL3-202ENST00000337339 SLC27A2O14975 620 aa11.59□□□□□ -0.55
MSL3-202ENST00000337339 CAMK4Q16566 473 aa11.59□□□□□ -0.55
MSL3-202ENST00000337339 TPCN1Q9ULQ1 816 aa11.59□□□□□ -0.55
MSL3-202ENST00000337339 NALCNQ8IZF0 1738 aa11.59□□□□□ -0.55
MSL3-202ENST00000337339 KAT6BQ8WYB5 2073 aa11.59□□□□□ -0.55
MSL3-202ENST00000337339 FAM177BA6PVY3 158 aa11.59□□□□□ -0.55
MSL3-202ENST00000337339 HIP1O00291 1037 aa11.59□□□□□ -0.55
MSL3-202ENST00000337339 TNNI3KQ59H18 835 aa11.59□□□□□ -0.55
MSL3-202ENST00000337339 GIMAP6Q6P9H5 292 aa11.59□□□□□ -0.55
MSL3-202ENST00000337339 ZCRB1Q8TBF4 217 aaKnown RBP11.59□□□□□ -0.55
MSL3-202ENST00000337339 FPGT-TNNI3KV9GXZ4 949 aa11.59□□□□□ -0.55
MSL3-202ENST00000337339 F13A1P00488 732 aa11.58□□□□□ -0.55
MSL3-202ENST00000337339 HCLS1P14317 486 aaPredicted RBP11.58□□□□□ -0.56
MSL3-202ENST00000337339 CHST3Q7LGC8 479 aa11.58□□□□□ -0.56
MSL3-202ENST00000337339 FMN2Q9NZ56 1722 aa11.58□□□□□ -0.56
MSL3-202ENST00000337339 H3BQV1 296 aa11.58□□□□□ -0.56
MSL3-202ENST00000337339 PHF14O94880 888 aa11.58□□□□□ -0.56
MSL3-202ENST00000337339 GPTP24298 496 aa11.58□□□□□ -0.56
MSL3-202ENST00000337339 PTPN12Q05209 780 aaKnown RBP11.58□□□□□ -0.56
MSL3-202ENST00000337339 IFFO2Q5TF58 517 aa11.58□□□□□ -0.56
MSL3-202ENST00000337339 TTC14Q96N46 770 aa11.58□□□□□ -0.56
MSL3-202ENST00000337339 C1orf167Q5SNV9 1468 aa11.57□□□□□ -0.56
MSL3-202ENST00000337339 WASHC4Q2M389 1173 aa11.57□□□□□ -0.56
MSL3-202ENST00000337339 HSP90AB3PQ58FF7 597 aa11.57□□□□□ -0.56
MSL3-202ENST00000337339 VPS53Q5VIR6 699 aa11.57□□□□□ -0.56
MSL3-202ENST00000337339 ZSCAN30Q86W11 494 aa11.57□□□□□ -0.56
MSL3-202ENST00000337339 USP25Q9UHP3 1055 aa11.57□□□□□ -0.56
MSL3-202ENST00000337339 KDM4AO75164 1064 aa11.57□□□□□ -0.56
MSL3-202ENST00000337339 NECTIN1Q15223 517 aa11.57□□□□□ -0.56
MSL3-202ENST00000337339 FAM184AQ8NB25 1140 aa11.57□□□□□ -0.56
MSL3-202ENST00000337339 ZNF830Q96NB3 372 aaPredicted RBP11.57□□□□□ -0.56
MSL3-202ENST00000337339 ARID3AQ99856 593 aa11.57□□□□□ -0.56
MSL3-202ENST00000337339 ZSCAN31Q96LW9 406 aaPredicted RBP11.56□□□□□ -0.56
MSL3-202ENST00000337339 ZSWIM6Q9HCJ5 1215 aa11.56□□□□□ -0.56
MSL3-202ENST00000337339 CCT2P78371 535 aaKnown RBP11.56□□□□□ -0.56
MSL3-202ENST00000337339 LRRC24Q50LG9 513 aa11.56□□□□□ -0.56
MSL3-202ENST00000337339 MAP4K1Q92918 833 aa11.56□□□□□ -0.56
MSL3-202ENST00000337339 CWC25Q9NXE8 425 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms