RNA–Protein interactions for RNA: ENST00000336735.8

SEL1L-201, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEL1L, Length 7,925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-201ENST00000336735 NCOA7Q8NI08 942 aa11.26□□□□□ -0.61
SEL1L-201ENST00000336735 DACT1Q9NYF0 836 aa11.26□□□□□ -0.61
SEL1L-201ENST00000336735 NOLC1Q14978 699 aaKnown RBP eCLIP11.26□□□□□ -0.61
SEL1L-201ENST00000336735 TMEM67Q5HYA8 995 aa11.26□□□□□ -0.61
SEL1L-201ENST00000336735 KRT28Q7Z3Y7 464 aa11.26□□□□□ -0.61
SEL1L-201ENST00000336735 SNRPA1P09661 255 aaKnown RBP11.26□□□□□ -0.61
SEL1L-201ENST00000336735 FAM200AQ8TCP9 573 aa11.26□□□□□ -0.61
SEL1L-201ENST00000336735 DYNC1I1O14576 645 aa11.25□□□□□ -0.61
SEL1L-201ENST00000336735 ZKSCAN5Q9Y2L8 839 aa11.25□□□□□ -0.61
SEL1L-201ENST00000336735 NLRP5P59047 1200 aa11.25□□□□□ -0.61
SEL1L-201ENST00000336735 PA2G4Q9UQ80 394 aaKnown RBP11.25□□□□□ -0.61
SEL1L-201ENST00000336735 KLF18A0A0U1RQI7 1052 aa11.25□□□□□ -0.61
SEL1L-201ENST00000336735 SNW1Q13573 536 aaKnown RBP11.25□□□□□ -0.61
SEL1L-201ENST00000336735 FKBP15Q5T1M5 1219 aa11.25□□□□□ -0.61
SEL1L-201ENST00000336735 METAP2P50579 478 aaKnown RBP eCLIP11.25□□□□□ -0.61
SEL1L-201ENST00000336735 PPP4R3BQ5MIZ7 849 aa11.25□□□□□ -0.61
SEL1L-201ENST00000336735 CCDC102BQ68D86 513 aa11.25□□□□□ -0.61
SEL1L-201ENST00000336735 XAGE3Q8WTP9 111 aa11.25□□□□□ -0.61
SEL1L-201ENST00000336735 JAKMIP3Q5VZ66 844 aa11.25□□□□□ -0.61
SEL1L-201ENST00000336735 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.25□□□□□ -0.61
SEL1L-201ENST00000336735 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
SEL1L-201ENST00000336735 ZNF76P36508 570 aa11.25□□□□□ -0.61
SEL1L-201ENST00000336735 ANO6Q4KMQ2 910 aa11.25□□□□□ -0.61
SEL1L-201ENST00000336735 COPS6Q7L5N1 327 aa11.25□□□□□ -0.61
SEL1L-201ENST00000336735 CCDC194A0A1B0GVG4 234 aa11.24□□□□□ -0.61
SEL1L-201ENST00000336735 ZNF652Q9Y2D9 606 aa11.24□□□□□ -0.61
SEL1L-201ENST00000336735 ZBTB7BO15156 539 aaPredicted RBP11.24□□□□□ -0.61
SEL1L-201ENST00000336735 NUP88Q99567 741 aaPredicted RBP11.24□□□□□ -0.61
SEL1L-201ENST00000336735 DMRT2Q9Y5R5 561 aa11.24□□□□□ -0.61
SEL1L-201ENST00000336735 KSR2Q6VAB6 950 aa11.24□□□□□ -0.61
SEL1L-201ENST00000336735 USP26Q9BXU7 913 aa11.24□□□□□ -0.61
SEL1L-201ENST00000336735 SEC63Q9UGP8 760 aaKnown RBP11.24□□□□□ -0.61
SEL1L-201ENST00000336735 TTC21AQ8NDW8 1320 aa11.24□□□□□ -0.61
SEL1L-201ENST00000336735 KDM2BQ8NHM5 1336 aa11.24□□□□□ -0.61
SEL1L-201ENST00000336735 POLR3GO15318 223 aaPredicted RBP11.24□□□□□ -0.61
SEL1L-201ENST00000336735 CEP135Q66GS9 1140 aa11.24□□□□□ -0.61
SEL1L-201ENST00000336735 TAX1BP1Q86VP1 789 aa11.24□□□□□ -0.61
SEL1L-201ENST00000336735 SLC26A6Q9BXS9 759 aa11.24□□□□□ -0.61
SEL1L-201ENST00000336735 TTC12Q9H892 705 aaPredicted RBP11.24□□□□□ -0.61
SEL1L-201ENST00000336735 ZNF287Q9HBT7 754 aa11.24□□□□□ -0.61
SEL1L-201ENST00000336735 YEATS4O95619 227 aa11.23□□□□□ -0.61
SEL1L-201ENST00000336735 NEFHP12036 1026 aa11.23□□□□□ -0.61
SEL1L-201ENST00000336735 NMIQ13287 307 aaPredicted RBP11.23□□□□□ -0.61
SEL1L-201ENST00000336735 TTF1Q15361 905 aaPredicted RBP11.23□□□□□ -0.61
SEL1L-201ENST00000336735 PPIP5K1Q6PFW1 1433 aa11.23□□□□□ -0.61
SEL1L-201ENST00000336735 AK2P54819 239 aa11.23□□□□□ -0.61
SEL1L-201ENST00000336735 SLC39A6Q13433 755 aa11.23□□□□□ -0.61
SEL1L-201ENST00000336735 DZIP1Q86YF9 867 aaKnown RBP11.23□□□□□ -0.61
SEL1L-201ENST00000336735 GRM8O00222 908 aa11.23□□□□□ -0.61
SEL1L-201ENST00000336735 CACNA2D4Q7Z3S7 1137 aa11.23□□□□□ -0.61
SEL1L-201ENST00000336735 DNAJC25Q9H1X3 360 aa11.23□□□□□ -0.61
SEL1L-201ENST00000336735 SPDYE4A6NLX3 237 aa11.23□□□□□ -0.61
SEL1L-201ENST00000336735 LMBR1LQ6UX01 489 aa11.23□□□□□ -0.61
SEL1L-201ENST00000336735 CATIPQ7Z7H3 387 aa11.23□□□□□ -0.61
SEL1L-201ENST00000336735 ZNF444Q8N0Y2 327 aaPredicted RBP11.23□□□□□ -0.61
SEL1L-201ENST00000336735 TRAPPC8Q9Y2L5 1435 aa11.23□□□□□ -0.61
SEL1L-201ENST00000336735 CHMLP26374 656 aa11.22□□□□□ -0.61
SEL1L-201ENST00000336735 Q6ZUG5 572 aa11.22□□□□□ -0.61
SEL1L-201ENST00000336735 CCDC150Q8NCX0 1101 aa11.22□□□□□ -0.61
SEL1L-201ENST00000336735 CHRNA2Q15822 529 aa11.22□□□□□ -0.61
SEL1L-201ENST00000336735 TAF3Q5VWG9 929 aa11.22□□□□□ -0.61
SEL1L-201ENST00000336735 MRPS27Q92552 414 aaKnown RBP11.22□□□□□ -0.61
SEL1L-201ENST00000336735 DUOX2Q9NRD8 1548 aa11.22□□□□□ -0.61
SEL1L-201ENST00000336735 SKILP12757 684 aa11.22□□□□□ -0.61
SEL1L-201ENST00000336735 SYKP43405 635 aa11.22□□□□□ -0.61
SEL1L-201ENST00000336735 MCMDC2Q4G0Z9 681 aa11.22□□□□□ -0.61
SEL1L-201ENST00000336735 RNF123Q5XPI4 1314 aa11.22□□□□□ -0.61
SEL1L-201ENST00000336735 MFSD6Q6ZSS7 791 aa11.22□□□□□ -0.61
SEL1L-201ENST00000336735 GNG11P61952 73 aa11.22□□□□□ -0.61
SEL1L-201ENST00000336735 TSG101Q99816 390 aa11.22□□□□□ -0.61
SEL1L-201ENST00000336735 PAXBP1Q9Y5B6 917 aa11.22□□□□□ -0.61
SEL1L-201ENST00000336735 ENOX2Q16206 610 aaKnown RBP11.21□□□□□ -0.61
SEL1L-201ENST00000336735 LINS1Q8NG48 757 aa11.21□□□□□ -0.61
SEL1L-201ENST00000336735 MPHOSPH10O00566 681 aaKnown RBP11.21□□□□□ -0.61
SEL1L-201ENST00000336735 RBM25P49756 843 aaKnown RBP11.21□□□□□ -0.61
SEL1L-201ENST00000336735 A0A1W2PP64 1363 aa11.21□□□□□ -0.61
SEL1L-201ENST00000336735 DNA2P51530 1060 aa11.21□□□□□ -0.61
SEL1L-201ENST00000336735 OTUD7AQ8TE49 926 aaPredicted RBP11.21□□□□□ -0.61
SEL1L-201ENST00000336735 MAP9Q49MG5 647 aa11.21□□□□□ -0.62
SEL1L-201ENST00000336735 AKAP4Q5JQC9 854 aa11.21□□□□□ -0.62
SEL1L-201ENST00000336735 INTS4Q96HW7 963 aaKnown RBP11.21□□□□□ -0.62
SEL1L-201ENST00000336735 TEX13AQ9BXU3 409 aaPredicted RBP11.21□□□□□ -0.62
SEL1L-201ENST00000336735 TTC41PQ6P2S7 1318 aa11.21□□□□□ -0.62
SEL1L-201ENST00000336735 TDRD12Q587J7 1177 aaKnown RBP11.21□□□□□ -0.62
SEL1L-201ENST00000336735 SYCP2Q9BX26 1530 aa11.2□□□□□ -0.62
SEL1L-201ENST00000336735 GOLGA6L9A6NEM1 432 aa11.2□□□□□ -0.62
SEL1L-201ENST00000336735 MTIF2P46199 727 aaKnown RBP11.2□□□□□ -0.62
SEL1L-201ENST00000336735 ALG1Q9BT22 464 aa11.2□□□□□ -0.62
SEL1L-201ENST00000336735 CCDC171Q6TFL3 1326 aa11.2□□□□□ -0.62
SEL1L-201ENST00000336735 USO1O60763 962 aaKnown RBP11.2□□□□□ -0.62
SEL1L-201ENST00000336735 ZFYP08048 801 aaPredicted RBP11.2□□□□□ -0.62
SEL1L-201ENST00000336735 KCNG4Q8TDN1 519 aa11.2□□□□□ -0.62
SEL1L-201ENST00000336735 ZSWIM4Q9H7M6 989 aa11.2□□□□□ -0.62
SEL1L-201ENST00000336735 PRKCSHP14314 528 aaPredicted RBP11.2□□□□□ -0.62
SEL1L-201ENST00000336735 CWF19L2Q2TBE0 894 aaKnown RBP11.2□□□□□ -0.62
SEL1L-201ENST00000336735 COL17A1Q9UMD9 1497 aaPredicted RBP11.2□□□□□ -0.62
SEL1L-201ENST00000336735 PAFAH1B1P43034 410 aa11.2□□□□□ -0.62
SEL1L-201ENST00000336735 AOPEPQ8N6M6 819 aa11.2□□□□□ -0.62
SEL1L-201ENST00000336735 RAB34Q9BZG1 259 aa11.2□□□□□ -0.62
SEL1L-201ENST00000336735 PZPP20742 1482 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms