RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 ERBB4Q15303 1308 aa17.15■□□□□ 0.34
LIPA-202ENST00000336233 SNRPA1P09661 255 aaKnown RBP17.15■□□□□ 0.34
LIPA-202ENST00000336233 PTH1RQ03431 593 aa17.15■□□□□ 0.34
LIPA-202ENST00000336233 NECTIN1Q15223 517 aa17.15■□□□□ 0.34
LIPA-202ENST00000336233 NFATC2IPQ8NCF5 419 aa17.15■□□□□ 0.34
LIPA-202ENST00000336233 ZNF496Q96IT1 587 aaPredicted RBP17.15■□□□□ 0.34
LIPA-202ENST00000336233 RBSNQ9H1K0 784 aa17.14■□□□□ 0.33
LIPA-202ENST00000336233 PRIM1P49642 420 aaKnown RBP17.14■□□□□ 0.33
LIPA-202ENST00000336233 FOXD4L5Q5VV16 416 aaPredicted RBP17.14■□□□□ 0.33
LIPA-202ENST00000336233 FOXD4L4Q8WXT5 416 aaPredicted RBP17.14■□□□□ 0.33
LIPA-202ENST00000336233 NSFL1CQ9UNZ2 370 aaKnown RBP17.14■□□□□ 0.33
LIPA-202ENST00000336233 ZSCAN31Q96LW9 406 aaPredicted RBP17.13■□□□□ 0.33
LIPA-202ENST00000336233 COPRSQ9NQ92 184 aa17.13■□□□□ 0.33
LIPA-202ENST00000336233 MED23Q9ULK4 1368 aa17.13■□□□□ 0.33
LIPA-202ENST00000336233 CASTP20810 708 aaKnown RBP17.13■□□□□ 0.33
LIPA-202ENST00000336233 COPS6Q7L5N1 327 aa17.13■□□□□ 0.33
LIPA-202ENST00000336233 SH2B1Q9NRF2 756 aaPredicted RBP17.13■□□□□ 0.33
LIPA-202ENST00000336233 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.13■□□□□ 0.33
LIPA-202ENST00000336233 RFX7Q2KHR2 1363 aa17.13■□□□□ 0.33
LIPA-202ENST00000336233 HS1BP3Q53T59 392 aa17.12■□□□□ 0.33
LIPA-202ENST00000336233 MAP4K1Q92918 833 aa17.12■□□□□ 0.33
LIPA-202ENST00000336233 SYAP1Q96A49 352 aaPredicted RBP17.12■□□□□ 0.33
LIPA-202ENST00000336233 PDLIM2Q96JY6 352 aa17.12■□□□□ 0.33
LIPA-202ENST00000336233 UBR2Q8IWV8 1755 aa17.12■□□□□ 0.33
LIPA-202ENST00000336233 CYP27B1O15528 508 aa17.12■□□□□ 0.33
LIPA-202ENST00000336233 RABL6Q3YEC7 729 aaPredicted RBP17.12■□□□□ 0.33
LIPA-202ENST00000336233 FMNL2Q96PY5 1086 aa17.12■□□□□ 0.33
LIPA-202ENST00000336233 MYD88Q99836 296 aa17.12■□□□□ 0.33
LIPA-202ENST00000336233 ZSCAN22P10073 491 aaPredicted RBP17.11■□□□□ 0.33
LIPA-202ENST00000336233 PRPF40BQ6NWY9 871 aaKnown RBP17.11■□□□□ 0.33
LIPA-202ENST00000336233 ANKRD13DQ6ZTN6 518 aa17.11■□□□□ 0.33
LIPA-202ENST00000336233 PAPPAQ13219 1627 aa17.11■□□□□ 0.33
LIPA-202ENST00000336233 MYL6BP14649 208 aa17.11■□□□□ 0.33
LIPA-202ENST00000336233 RFX5P48382 616 aaPredicted RBP17.11■□□□□ 0.33
LIPA-202ENST00000336233 NMIQ13287 307 aaPredicted RBP17.11■□□□□ 0.33
LIPA-202ENST00000336233 TTC5Q8N0Z6 440 aa17.11■□□□□ 0.33
LIPA-202ENST00000336233 PDRG1Q9NUG6 133 aa17.11■□□□□ 0.33
LIPA-202ENST00000336233 CYP46A1Q9Y6A2 500 aa17.11■□□□□ 0.33
LIPA-202ENST00000336233 SPATA31A3Q5VYP0 1347 aa17.11■□□□□ 0.33
LIPA-202ENST00000336233 EPHA10Q5JZY3 1008 aa17.11■□□□□ 0.33
LIPA-202ENST00000336233 CADPS2Q86UW7 1296 aa17.11■□□□□ 0.33
LIPA-202ENST00000336233 JAKMIP1Q96N16 626 aaKnown RBP17.11■□□□□ 0.33
LIPA-202ENST00000336233 TLR7Q9NYK1 1049 aaKnown RBP17.11■□□□□ 0.33
LIPA-202ENST00000336233 NUP188Q5SRE5 1749 aa17.1■□□□□ 0.33
LIPA-202ENST00000336233 KLHL34Q8N239 644 aa17.1■□□□□ 0.33
LIPA-202ENST00000336233 RBM8AQ9Y5S9 174 aaKnown RBP17.1■□□□□ 0.33
LIPA-202ENST00000336233 SYCE3A1L190 88 aa17.1■□□□□ 0.33
LIPA-202ENST00000336233 ZKSCAN1P17029 563 aaPredicted RBP17.1■□□□□ 0.33
LIPA-202ENST00000336233 ADCK5Q3MIX3 580 aa17.1■□□□□ 0.33
LIPA-202ENST00000336233 CREB3L3Q68CJ9 461 aa17.1■□□□□ 0.33
LIPA-202ENST00000336233 CCDC8Q9H0W5 538 aaPredicted RBP17.1■□□□□ 0.33
LIPA-202ENST00000336233 ALDH8A1Q9H2A2 487 aaPredicted RBP17.1■□□□□ 0.33
LIPA-202ENST00000336233 SMC3Q9UQE7 1217 aa17.1■□□□□ 0.33
LIPA-202ENST00000336233 STX6O43752 255 aa17.09■□□□□ 0.33
LIPA-202ENST00000336233 CSB-PGBD3P0DP91 1061 aa17.09■□□□□ 0.33
LIPA-202ENST00000336233 SYT1P21579 422 aa17.09■□□□□ 0.33
LIPA-202ENST00000336233 USP48Q86UV5 1035 aa17.09■□□□□ 0.33
LIPA-202ENST00000336233 FAM227BQ96M60 508 aa17.09■□□□□ 0.33
LIPA-202ENST00000336233 USP16Q9Y5T5 823 aa17.09■□□□□ 0.33
LIPA-202ENST00000336233 PHF14O94880 888 aa17.08■□□□□ 0.33
LIPA-202ENST00000336233 LARGE1O95461 756 aa17.08■□□□□ 0.32
LIPA-202ENST00000336233 F13A1P00488 732 aa17.08■□□□□ 0.32
LIPA-202ENST00000336233 ATP5JP18859 108 aa17.08■□□□□ 0.32
LIPA-202ENST00000336233 ZSCAN30Q86W11 494 aa17.08■□□□□ 0.32
LIPA-202ENST00000336233 DDX17Q92841 729 aaKnown RBP17.08■□□□□ 0.32
LIPA-202ENST00000336233 ATP6V1DQ9Y5K8 247 aa17.08■□□□□ 0.32
LIPA-202ENST00000336233 XIRP1Q702N8 1843 aaKnown RBP17.07■□□□□ 0.32
LIPA-202ENST00000336233 SLC27A2O14975 620 aa17.07■□□□□ 0.32
LIPA-202ENST00000336233 PSMA5P28066 241 aa17.07■□□□□ 0.32
LIPA-202ENST00000336233 CASP7P55210 303 aa17.07■□□□□ 0.32
LIPA-202ENST00000336233 TSGA10IPQ3SY00 556 aa17.07■□□□□ 0.32
LIPA-202ENST00000336233 PLBD2Q8NHP8 589 aa17.07■□□□□ 0.32
LIPA-202ENST00000336233 SIL1Q9H173 461 aa17.07■□□□□ 0.32
LIPA-202ENST00000336233 TJP1Q07157 1748 aa17.07■□□□□ 0.32
LIPA-202ENST00000336233 A0A0D9SFI3 127 aa17.07■□□□□ 0.32
LIPA-202ENST00000336233 CPA1P15085 419 aa17.07■□□□□ 0.32
LIPA-202ENST00000336233 PTPN12Q05209 780 aaKnown RBP17.07■□□□□ 0.32
LIPA-202ENST00000336233 FSD1Q9BTV5 496 aa17.07■□□□□ 0.32
LIPA-202ENST00000336233 HMG20BQ9P0W2 317 aa17.06■□□□□ 0.32
LIPA-202ENST00000336233 TCHHQ07283 1943 aa17.06■□□□□ 0.32
LIPA-202ENST00000336233 GADD45BO75293 160 aaPredicted RBP17.06■□□□□ 0.32
LIPA-202ENST00000336233 CABP4P57796 275 aa17.06■□□□□ 0.32
LIPA-202ENST00000336233 ST3GAL1Q11201 340 aa17.06■□□□□ 0.32
LIPA-202ENST00000336233 TNNI3KQ59H18 835 aa17.06■□□□□ 0.32
LIPA-202ENST00000336233 RNF20Q5VTR2 975 aa17.06■□□□□ 0.32
LIPA-202ENST00000336233 BOLA2Q9H3K6 86 aa17.06■□□□□ 0.32
LIPA-202ENST00000336233 FPGT-TNNI3KV9GXZ4 949 aa17.06■□□□□ 0.32
LIPA-202ENST00000336233 KLHDC4Q8TBB5 520 aa17.06■□□□□ 0.32
LIPA-202ENST00000336233 TSPY26PQ9H489 355 aa17.06■□□□□ 0.32
LIPA-202ENST00000336233 KCPQ6ZWJ8 1503 aa17.05■□□□□ 0.32
LIPA-202ENST00000336233 CHRNA2Q15822 529 aa17.05■□□□□ 0.32
LIPA-202ENST00000336233 USPL1Q5W0Q7 1092 aa17.05■□□□□ 0.32
LIPA-202ENST00000336233 CABLES1Q8TDN4 633 aa17.05■□□□□ 0.32
LIPA-202ENST00000336233 ANKRD1Q15327 319 aa17.05■□□□□ 0.32
LIPA-202ENST00000336233 CCDC83Q8IWF9 413 aa17.05■□□□□ 0.32
LIPA-202ENST00000336233 DBNLQ9UJU6 430 aaKnown RBP17.05■□□□□ 0.32
LIPA-202ENST00000336233 MTMR6Q9Y217 621 aa17.05■□□□□ 0.32
LIPA-202ENST00000336233 GJB2P29033 226 aa17.04■□□□□ 0.32
LIPA-202ENST00000336233 UBE2HP62256 183 aa17.04■□□□□ 0.32
LIPA-202ENST00000336233 ME3Q16798 604 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms