RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 IL17REQ8NFR9 667 aa7.66□□□□□ -1.18
HMG20A-201ENST00000336216 HELBQ8NG08 1087 aaPredicted RBP7.66□□□□□ -1.18
HMG20A-201ENST00000336216 HYPKQ9NX55 129 aa7.66□□□□□ -1.18
HMG20A-201ENST00000336216 FLT4P35916 1363 aa7.66□□□□□ -1.18
HMG20A-201ENST00000336216 ME1P48163 572 aa7.66□□□□□ -1.18
HMG20A-201ENST00000336216 CHST3Q7LGC8 479 aa7.66□□□□□ -1.18
HMG20A-201ENST00000336216 CADPS2Q86UW7 1296 aa7.66□□□□□ -1.18
HMG20A-201ENST00000336216 CCAR2Q8N163 923 aaKnown RBP7.66□□□□□ -1.18
HMG20A-201ENST00000336216 C16orf45Q96MC5 204 aaPredicted RBP7.66□□□□□ -1.18
HMG20A-201ENST00000336216 TRERF1Q96PN7 1200 aa7.66□□□□□ -1.18
HMG20A-201ENST00000336216 CNPY2Q9Y2B0 182 aa7.66□□□□□ -1.18
HMG20A-201ENST00000336216 ERICH2A1L162 156 aa7.65□□□□□ -1.18
HMG20A-201ENST00000336216 STARD3NLO95772 234 aa7.65□□□□□ -1.18
HMG20A-201ENST00000336216 MCM2P49736 904 aa7.65□□□□□ -1.18
HMG20A-201ENST00000336216 ZNF445P59923 1031 aa7.65□□□□□ -1.18
HMG20A-201ENST00000336216 LDHAL6AQ6ZMR3 332 aa7.65□□□□□ -1.18
HMG20A-201ENST00000336216 CKAP2LQ8IYA6 745 aa7.65□□□□□ -1.18
HMG20A-201ENST00000336216 CGNQ9P2M7 1197 aaKnown RBP7.65□□□□□ -1.18
HMG20A-201ENST00000336216 PRR36Q9H6K5 1346 aa7.65□□□□□ -1.18
HMG20A-201ENST00000336216 ERICH4A6NGS2 130 aa7.65□□□□□ -1.18
HMG20A-201ENST00000336216 ATP8B2P98198 1209 aa7.65□□□□□ -1.18
HMG20A-201ENST00000336216 CCDC144CPQ8IYA2 1237 aa7.65□□□□□ -1.18
HMG20A-201ENST00000336216 PLEKHF1Q96S99 279 aa7.65□□□□□ -1.18
HMG20A-201ENST00000336216 LRP2BPQ9P2M1 347 aa7.65□□□□□ -1.18
HMG20A-201ENST00000336216 WDR33Q9C0J8 1336 aaKnown RBP7.65□□□□□ -1.19
HMG20A-201ENST00000336216 PTPRMP28827 1452 aa7.65□□□□□ -1.19
HMG20A-201ENST00000336216 GRM8O00222 908 aa7.65□□□□□ -1.19
HMG20A-201ENST00000336216 TIMM10P62072 90 aa7.65□□□□□ -1.19
HMG20A-201ENST00000336216 TPD52L1Q16890 204 aaPredicted RBP7.65□□□□□ -1.19
HMG20A-201ENST00000336216 C19orf44Q9H6X5 657 aa7.65□□□□□ -1.19
HMG20A-201ENST00000336216 TTC21AQ8NDW8 1320 aa7.64□□□□□ -1.19
HMG20A-201ENST00000336216 MINDY4BA8MYZ0 360 aa7.64□□□□□ -1.19
HMG20A-201ENST00000336216 SNRPA1P09661 255 aaKnown RBP7.64□□□□□ -1.19
HMG20A-201ENST00000336216 IFIT5Q13325 482 aaKnown RBP7.64□□□□□ -1.19
HMG20A-201ENST00000336216 KIF2CQ99661 725 aa7.64□□□□□ -1.19
HMG20A-201ENST00000336216 MSH6P52701 1360 aa7.64□□□□□ -1.19
HMG20A-201ENST00000336216 AK9Q5TCS8 1911 aa7.64□□□□□ -1.19
HMG20A-201ENST00000336216 PRAMEF22A3QJZ6 481 aa7.64□□□□□ -1.19
HMG20A-201ENST00000336216 EXOC5O00471 708 aa7.64□□□□□ -1.19
HMG20A-201ENST00000336216 A1BGP04217 495 aa7.64□□□□□ -1.19
HMG20A-201ENST00000336216 EDC3Q96F86 508 aaKnown RBP7.64□□□□□ -1.19
HMG20A-201ENST00000336216 NGLY1Q96IV0 654 aa7.64□□□□□ -1.19
HMG20A-201ENST00000336216 AKAP4Q5JQC9 854 aa7.64□□□□□ -1.19
HMG20A-201ENST00000336216 IP6K1Q92551 441 aa7.64□□□□□ -1.19
HMG20A-201ENST00000336216 RAI14Q9P0K7 980 aa7.64□□□□□ -1.19
HMG20A-201ENST00000336216 PPP1R1BQ9UD71 204 aaPredicted RBP7.64□□□□□ -1.19
HMG20A-201ENST00000336216 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.64□□□□□ -1.19
HMG20A-201ENST00000336216 V9GYY5 206 aaPredicted RBP7.64□□□□□ -1.19
HMG20A-201ENST00000336216 ATP2B2Q01814 1243 aa7.63□□□□□ -1.19
HMG20A-201ENST00000336216 KSR2Q6VAB6 950 aa7.63□□□□□ -1.19
HMG20A-201ENST00000336216 SIRT2Q8IXJ6 389 aa7.63□□□□□ -1.19
HMG20A-201ENST00000336216 ZCRB1Q8TBF4 217 aaKnown RBP7.63□□□□□ -1.19
HMG20A-201ENST00000336216 WWC3Q9ULE0 1092 aa7.63□□□□□ -1.19
HMG20A-201ENST00000336216 PIK3R4Q99570 1358 aa7.63□□□□□ -1.19
HMG20A-201ENST00000336216 HIP1O00291 1037 aa7.63□□□□□ -1.19
HMG20A-201ENST00000336216 PDCP20941 246 aa7.63□□□□□ -1.19
HMG20A-201ENST00000336216 STK38Q15208 465 aa7.63□□□□□ -1.19
HMG20A-201ENST00000336216 U2AF2P26368 475 aaKnown RBP eCLIP7.63□□□□□ -1.19
HMG20A-201ENST00000336216 TDO2P48775 406 aa7.63□□□□□ -1.19
HMG20A-201ENST00000336216 TPM4P67936 248 aa7.63□□□□□ -1.19
HMG20A-201ENST00000336216 NCBP3Q53F19 620 aaKnown RBP7.63□□□□□ -1.19
HMG20A-201ENST00000336216 FAM89AQ96GI7 184 aa7.63□□□□□ -1.19
HMG20A-201ENST00000336216 ESYT1Q9BSJ8 1104 aa7.63□□□□□ -1.19
HMG20A-201ENST00000336216 CCDC94Q9BW85 323 aaPredicted RBP7.63□□□□□ -1.19
HMG20A-201ENST00000336216 BICC1Q9H694 974 aaKnown RBP7.63□□□□□ -1.19
HMG20A-201ENST00000336216 KRT85P78386 507 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 FILIP1Q7Z7B0 1213 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 ZBTB9Q96C00 473 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 ZNF496Q96IT1 587 aaPredicted RBP7.62□□□□□ -1.19
HMG20A-201ENST00000336216 SPATA32Q96LK8 384 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 NOL10Q9BSC4 688 aaKnown RBP7.62□□□□□ -1.19
HMG20A-201ENST00000336216 USP16Q9Y5T5 823 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 ATP7BP35670 1465 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 KINO60870 393 aaKnown RBP7.62□□□□□ -1.19
HMG20A-201ENST00000336216 SAFBQ15424 915 aaKnown RBP eCLIP7.62□□□□□ -1.19
HMG20A-201ENST00000336216 CCDC24Q8N4L8 307 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 ZNF594Q96JF6 807 aaPredicted RBP7.62□□□□□ -1.19
HMG20A-201ENST00000336216 LIMCH1Q9UPQ0 1083 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 RIMS1Q86UR5 1692 aaKnown RBP7.62□□□□□ -1.19
HMG20A-201ENST00000336216 RNMTO43148 476 aaKnown RBP7.62□□□□□ -1.19
HMG20A-201ENST00000336216 MCM5P33992 734 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 HS1BP3Q53T59 392 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 CCDC183Q5T5S1 534 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 FAM173BQ6P4H8 233 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 ZNF219Q9P2Y4 722 aaPredicted RBP7.62□□□□□ -1.19
HMG20A-201ENST00000336216 JAG2Q9Y219 1238 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 TECPR2O15040 1411 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 ZNF500O60304 480 aaPredicted RBP7.62□□□□□ -1.19
HMG20A-201ENST00000336216 BRPF1P55201 1214 aaPredicted RBP7.62□□□□□ -1.19
HMG20A-201ENST00000336216 ZNF790Q6PG37 636 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 BRF1Q92994 677 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 AIDAQ96BJ3 306 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 TNMDQ9H2S6 317 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 PALD1Q9ULE6 856 aa7.62□□□□□ -1.19
HMG20A-201ENST00000336216 C3P01024 1663 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 UBR1Q8IWV7 1749 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 ROBO2Q9HCK4 1378 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 EDC4Q6P2E9 1401 aaKnown RBP7.61□□□□□ -1.19
HMG20A-201ENST00000336216 POLR3DP05423 398 aaPredicted RBP7.61□□□□□ -1.19
HMG20A-201ENST00000336216 CCDC192P0DO97 292 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms