RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 KIAA1211Q6ZU35 1233 aa16.08■□□□□ 0.16
RC3H2-201ENST00000335387 NCLP19338 710 aaKnown RBP16.07■□□□□ 0.16
RC3H2-201ENST00000335387 PTH1RQ03431 593 aa16.07■□□□□ 0.16
RC3H2-201ENST00000335387 ELP1O95163 1332 aa16.07■□□□□ 0.16
RC3H2-201ENST00000335387 GADD45BO75293 160 aaPredicted RBP16.07■□□□□ 0.16
RC3H2-201ENST00000335387 DDX58O95786 925 aaKnown RBP16.07■□□□□ 0.16
RC3H2-201ENST00000335387 SHANK3Q9BYB0 1731 aa16.07■□□□□ 0.16
RC3H2-201ENST00000335387 SUCLG2Q96I99 432 aa16.06■□□□□ 0.16
RC3H2-201ENST00000335387 MTMR6Q9Y217 621 aa16.06■□□□□ 0.16
RC3H2-201ENST00000335387 MSNP26038 577 aaKnown RBP16.06■□□□□ 0.16
RC3H2-201ENST00000335387 CSPP1Q1MSJ5 1256 aa16.06■□□□□ 0.16
RC3H2-201ENST00000335387 RABL6Q3YEC7 729 aaPredicted RBP16.06■□□□□ 0.16
RC3H2-201ENST00000335387 ESCO1Q5FWF5 840 aa16.06■□□□□ 0.16
RC3H2-201ENST00000335387 NAP1L5Q96NT1 182 aaPredicted RBP16.06■□□□□ 0.16
RC3H2-201ENST00000335387 DIAPH3Q9NSV4 1193 aa16.06■□□□□ 0.16
RC3H2-201ENST00000335387 IGKV5-2P06315 115 aa16.05■□□□□ 0.16
RC3H2-201ENST00000335387 CWC27Q6UX04 472 aaKnown RBP16.05■□□□□ 0.16
RC3H2-201ENST00000335387 MEGF6O75095 1541 aa16.05■□□□□ 0.16
RC3H2-201ENST00000335387 UBE2Q2Q8WVN8 375 aa16.05■□□□□ 0.16
RC3H2-201ENST00000335387 COPRSQ9NQ92 184 aa16.05■□□□□ 0.16
RC3H2-201ENST00000335387 SLC52A2Q9HAB3 445 aa16.04■□□□□ 0.16
RC3H2-201ENST00000335387 PDRG1Q9NUG6 133 aa16.04■□□□□ 0.16
RC3H2-201ENST00000335387 C9orf78Q9NZ63 289 aaPredicted RBP16.04■□□□□ 0.16
RC3H2-201ENST00000335387 HMG20BQ9P0W2 317 aa16.04■□□□□ 0.16
RC3H2-201ENST00000335387 AXIN2Q9Y2T1 843 aa16.04■□□□□ 0.16
RC3H2-201ENST00000335387 CYP46A1Q9Y6A2 500 aa16.04■□□□□ 0.16
RC3H2-201ENST00000335387 LARGE1O95461 756 aa16.04■□□□□ 0.16
RC3H2-201ENST00000335387 MAP4K4O95819 1239 aaPredicted RBP16.04■□□□□ 0.16
RC3H2-201ENST00000335387 CASTP20810 708 aaKnown RBP16.04■□□□□ 0.16
RC3H2-201ENST00000335387 LARP1Q6PKG0 1096 aaKnown RBP16.04■□□□□ 0.16
RC3H2-201ENST00000335387 EAF2Q96CJ1 260 aaPredicted RBP16.04■□□□□ 0.16
RC3H2-201ENST00000335387 BICC1Q9H694 974 aaKnown RBP16.04■□□□□ 0.16
RC3H2-201ENST00000335387 NPHP3Q7Z494 1330 aa16.04■□□□□ 0.16
RC3H2-201ENST00000335387 NEURL1BA8MQ27 555 aa16.03■□□□□ 0.16
RC3H2-201ENST00000335387 IFIT2P09913 472 aaKnown RBP16.03■□□□□ 0.16
RC3H2-201ENST00000335387 RFX5P48382 616 aaPredicted RBP16.03■□□□□ 0.16
RC3H2-201ENST00000335387 CREB3L3Q68CJ9 461 aa16.03■□□□□ 0.16
RC3H2-201ENST00000335387 ADCK5Q3MIX3 580 aa16.03■□□□□ 0.16
RC3H2-201ENST00000335387 METTL22Q9BUU2 404 aaPredicted RBP16.03■□□□□ 0.16
RC3H2-201ENST00000335387 SPG7Q9UQ90 795 aa16.03■□□□□ 0.16
RC3H2-201ENST00000335387 AHDC1Q5TGY3 1603 aaPredicted RBP16.03■□□□□ 0.16
RC3H2-201ENST00000335387 ZNF790Q6PG37 636 aa16.03■□□□□ 0.16
RC3H2-201ENST00000335387 SMC3Q9UQE7 1217 aa16.03■□□□□ 0.16
RC3H2-201ENST00000335387 PSMA5P28066 241 aa16.02■□□□□ 0.16
RC3H2-201ENST00000335387 ANKRD1Q15327 319 aa16.02■□□□□ 0.16
RC3H2-201ENST00000335387 CWF19L2Q2TBE0 894 aaKnown RBP16.02■□□□□ 0.16
RC3H2-201ENST00000335387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.02■□□□□ 0.16
RC3H2-201ENST00000335387 CPDO75976 1380 aa16.02■□□□□ 0.16
RC3H2-201ENST00000335387 CNPY2Q9Y2B0 182 aa16.02■□□□□ 0.15
RC3H2-201ENST00000335387 SLC27A2O14975 620 aa16.01■□□□□ 0.15
RC3H2-201ENST00000335387 ANXA1P04083 346 aa16.01■□□□□ 0.15
RC3H2-201ENST00000335387 GCKRQ14397 625 aa16.01■□□□□ 0.15
RC3H2-201ENST00000335387 AACSQ86V21 672 aa16.01■□□□□ 0.15
RC3H2-201ENST00000335387 RBM8AQ9Y5S9 174 aaKnown RBP16.01■□□□□ 0.15
RC3H2-201ENST00000335387 PHKG2P15735 406 aa16.01■□□□□ 0.15
RC3H2-201ENST00000335387 ATP5JP18859 108 aa16.01■□□□□ 0.15
RC3H2-201ENST00000335387 ABCA3Q99758 1704 aa16.01■□□□□ 0.15
RC3H2-201ENST00000335387 GJB2P29033 226 aa16■□□□□ 0.15
RC3H2-201ENST00000335387 NMIQ13287 307 aaPredicted RBP16■□□□□ 0.15
RC3H2-201ENST00000335387 ME3Q16798 604 aa16■□□□□ 0.15
RC3H2-201ENST00000335387 ORAI2Q96SN7 254 aa16■□□□□ 0.15
RC3H2-201ENST00000335387 PA2G4Q9UQ80 394 aaKnown RBP16■□□□□ 0.15
RC3H2-201ENST00000335387 PRAMEF22A3QJZ6 481 aa16■□□□□ 0.15
RC3H2-201ENST00000335387 ZKSCAN1P17029 563 aaPredicted RBP16■□□□□ 0.15
RC3H2-201ENST00000335387 CASP7P55210 303 aa16■□□□□ 0.15
RC3H2-201ENST00000335387 RBM43Q6ZSC3 357 aaKnown RBP16■□□□□ 0.15
RC3H2-201ENST00000335387 JAKMIP1Q96N16 626 aaKnown RBP16■□□□□ 0.15
RC3H2-201ENST00000335387 KCPQ6ZWJ8 1503 aa16■□□□□ 0.15
RC3H2-201ENST00000335387 PRPF40BQ6NWY9 871 aaKnown RBP16■□□□□ 0.15
RC3H2-201ENST00000335387 PALLDQ8WX93 1383 aa15.99■□□□□ 0.15
RC3H2-201ENST00000335387 RPS6KB1P23443 525 aa15.99■□□□□ 0.15
RC3H2-201ENST00000335387 G3BP1Q13283 466 aaKnown RBP eCLIP15.99■□□□□ 0.15
RC3H2-201ENST00000335387 OS9Q13438 667 aaPredicted RBP15.99■□□□□ 0.15
RC3H2-201ENST00000335387 C14orf37Q86TY3 774 aa15.99■□□□□ 0.15
RC3H2-201ENST00000335387 TPCN1Q9ULQ1 816 aa15.99■□□□□ 0.15
RC3H2-201ENST00000335387 ROBO1Q9Y6N7 1651 aa15.98■□□□□ 0.15
RC3H2-201ENST00000335387 KRT28Q7Z3Y7 464 aa15.98■□□□□ 0.15
RC3H2-201ENST00000335387 PDCP20941 246 aa15.98■□□□□ 0.15
RC3H2-201ENST00000335387 TOB2Q14106 344 aaPredicted RBP15.98■□□□□ 0.15
RC3H2-201ENST00000335387 RNF20Q5VTR2 975 aa15.98■□□□□ 0.15
RC3H2-201ENST00000335387 PROSER2Q86WR7 435 aaPredicted RBP15.98■□□□□ 0.15
RC3H2-201ENST00000335387 A0A0D9SFI3 127 aa15.97■□□□□ 0.15
RC3H2-201ENST00000335387 FOXD4L5Q5VV16 416 aaPredicted RBP15.97■□□□□ 0.15
RC3H2-201ENST00000335387 FOXD4L4Q8WXT5 416 aaPredicted RBP15.97■□□□□ 0.15
RC3H2-201ENST00000335387 FAM227BQ96M60 508 aa15.97■□□□□ 0.15
RC3H2-201ENST00000335387 TNS3Q68CZ2 1445 aa15.97■□□□□ 0.15
RC3H2-201ENST00000335387 TAF5LO75529 589 aa15.97■□□□□ 0.15
RC3H2-201ENST00000335387 KRT32Q14532 448 aa15.97■□□□□ 0.15
RC3H2-201ENST00000335387 NOL8Q76FK4 1167 aaKnown RBP15.97■□□□□ 0.15
RC3H2-201ENST00000335387 GPR108Q9NPR9 543 aa15.97■□□□□ 0.15
RC3H2-201ENST00000335387 SPTLC3Q9NUV7 552 aa15.97■□□□□ 0.15
RC3H2-201ENST00000335387 SH3TC1Q8TE82 1336 aa15.96■□□□□ 0.15
RC3H2-201ENST00000335387 TLR7Q9NYK1 1049 aaKnown RBP15.96■□□□□ 0.15
RC3H2-201ENST00000335387 TNS2Q63HR2 1409 aa15.96■□□□□ 0.15
RC3H2-201ENST00000335387 PTPN12Q05209 780 aaKnown RBP15.96■□□□□ 0.15
RC3H2-201ENST00000335387 CCDC83Q8IWF9 413 aa15.96■□□□□ 0.15
RC3H2-201ENST00000335387 DCAF5Q96JK2 942 aa15.96■□□□□ 0.15
RC3H2-201ENST00000335387 GDPD2Q9HCC8 539 aa15.96■□□□□ 0.15
RC3H2-201ENST00000335387 USP25Q9UHP3 1055 aa15.96■□□□□ 0.15
RC3H2-201ENST00000335387 ZNF609O15014 1411 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms