RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 POLRMTO00411 1230 aaKnown RBP22.15■■□□□ 1.14
CHGA-202ENST00000334654 MS4A1P11836 297 aa22.15■■□□□ 1.14
CHGA-202ENST00000334654 PARP10Q53GL7 1025 aa22.15■■□□□ 1.14
CHGA-202ENST00000334654 MTFR1LQ9H019 292 aa22.15■■□□□ 1.14
CHGA-202ENST00000334654 CWC25Q9NXE8 425 aaPredicted RBP22.15■■□□□ 1.14
CHGA-202ENST00000334654 NRXN2Q9P2S2 1712 aa22.14■■□□□ 1.14
CHGA-202ENST00000334654 NTSR2O95665 410 aa22.14■■□□□ 1.13
CHGA-202ENST00000334654 MMP10P09238 476 aa22.14■■□□□ 1.13
CHGA-202ENST00000334654 USP44Q9H0E7 712 aa22.14■■□□□ 1.13
CHGA-202ENST00000334654 COG6Q9Y2V7 657 aa22.14■■□□□ 1.13
CHGA-202ENST00000334654 CARMIL3Q8ND23 1372 aa22.13■■□□□ 1.13
CHGA-202ENST00000334654 SGIP1Q9BQI5 828 aa22.13■■□□□ 1.13
CHGA-202ENST00000334654 ATF5Q9Y2D1 282 aaPredicted RBP22.13■■□□□ 1.13
CHGA-202ENST00000334654 H7C1W4 665 aa22.12■■□□□ 1.13
CHGA-202ENST00000334654 SERPINB2P05120 415 aa22.12■■□□□ 1.13
CHGA-202ENST00000334654 CASP7P55210 303 aa22.12■■□□□ 1.13
CHGA-202ENST00000334654 MVPQ14764 893 aaKnown RBP22.12■■□□□ 1.13
CHGA-202ENST00000334654 SYNE4Q8N205 404 aa22.12■■□□□ 1.13
CHGA-202ENST00000334654 UTYO14607 1347 aa22.12■■□□□ 1.13
CHGA-202ENST00000334654 FAM177BA6PVY3 158 aa22.11■■□□□ 1.13
CHGA-202ENST00000334654 JARID2Q92833 1246 aaPredicted RBP22.11■■□□□ 1.13
CHGA-202ENST00000334654 ZBTB7BO15156 539 aaPredicted RBP22.1■■□□□ 1.13
CHGA-202ENST00000334654 PCCAP05165 728 aaPredicted RBP22.1■■□□□ 1.13
CHGA-202ENST00000334654 PPP1R42Q7Z4L9 355 aa22.1■■□□□ 1.13
CHGA-202ENST00000334654 ITPRIPQ8IWB1 547 aa22.1■■□□□ 1.13
CHGA-202ENST00000334654 ZBTB38Q8NAP3 1195 aaPredicted RBP22.1■■□□□ 1.13
CHGA-202ENST00000334654 UTP14AQ9BVJ6 771 aaKnown RBP22.1■■□□□ 1.13
CHGA-202ENST00000334654 TRMT112Q9UI30 125 aaKnown RBP22.1■■□□□ 1.13
CHGA-202ENST00000334654 GRM8O00222 908 aa22.09■■□□□ 1.13
CHGA-202ENST00000334654 NBPF7P0C2Y1 421 aaPredicted RBP22.09■■□□□ 1.13
CHGA-202ENST00000334654 PTGER2P43116 358 aa22.09■■□□□ 1.13
CHGA-202ENST00000334654 FAM89AQ96GI7 184 aa22.09■■□□□ 1.13
CHGA-202ENST00000334654 MEIS3Q99687 375 aa22.09■■□□□ 1.13
CHGA-202ENST00000334654 PRR5LQ6MZQ0 368 aa22.09■■□□□ 1.13
CHGA-202ENST00000334654 NBPF5PQ86XG9 351 aaPredicted RBP22.09■■□□□ 1.13
CHGA-202ENST00000334654 NUTM1Q86Y26 1132 aa22.09■■□□□ 1.13
CHGA-202ENST00000334654 PARP3Q9Y6F1 533 aa22.09■■□□□ 1.13
CHGA-202ENST00000334654 TPTE2Q6XPS3 522 aa22.08■■□□□ 1.12
CHGA-202ENST00000334654 CRBNQ96SW2 442 aa22.08■■□□□ 1.12
CHGA-202ENST00000334654 ERFEQ4G0M1 354 aa22.07■■□□□ 1.12
CHGA-202ENST00000334654 RTL5Q5HYW3 569 aaPredicted RBP22.07■■□□□ 1.12
CHGA-202ENST00000334654 UBE3BQ7Z3V4 1068 aa22.07■■□□□ 1.12
CHGA-202ENST00000334654 NYXQ9GZU5 481 aa22.07■■□□□ 1.12
CHGA-202ENST00000334654 C9orf78Q9NZ63 289 aaPredicted RBP22.07■■□□□ 1.12
CHGA-202ENST00000334654 DDX60Q8IY21 1712 aaKnown RBP22.07■■□□□ 1.12
CHGA-202ENST00000334654 IRX6P78412 446 aaPredicted RBP22.06■■□□□ 1.12
CHGA-202ENST00000334654 SLC10A5Q5PT55 438 aa22.06■■□□□ 1.12
CHGA-202ENST00000334654 CCDC24Q8N4L8 307 aa22.06■■□□□ 1.12
CHGA-202ENST00000334654 KAZALD1Q96I82 304 aa22.06■■□□□ 1.12
CHGA-202ENST00000334654 DDX19BQ9UMR2 479 aa22.06■■□□□ 1.12
CHGA-202ENST00000334654 SH3TC1Q8TE82 1336 aa22.06■■□□□ 1.12
CHGA-202ENST00000334654 CDHR2Q9BYE9 1310 aa22.06■■□□□ 1.12
CHGA-202ENST00000334654 ABCC12Q96J65 1359 aa22.06■■□□□ 1.12
CHGA-202ENST00000334654 CNBD1Q8NA66 436 aa22.05■■□□□ 1.12
CHGA-202ENST00000334654 ANKRD31Q8N7Z5 1873 aa22.05■■□□□ 1.12
CHGA-202ENST00000334654 LAMB2P55268 1798 aa22.04■■□□□ 1.12
CHGA-202ENST00000334654 IRS4O14654 1257 aaPredicted RBP22.03■■□□□ 1.12
CHGA-202ENST00000334654 SUCLG2Q96I99 432 aa22.03■■□□□ 1.12
CHGA-202ENST00000334654 SPON1Q9HCB6 807 aa22.03■■□□□ 1.12
CHGA-202ENST00000334654 ZBTB40Q9NUA8 1239 aa22.03■■□□□ 1.12
CHGA-202ENST00000334654 GNAI3P08754 354 aa22.03■■□□□ 1.12
CHGA-202ENST00000334654 HCLS1P14317 486 aaPredicted RBP22.03■■□□□ 1.12
CHGA-202ENST00000334654 EPHA10Q5JZY3 1008 aa22.03■■□□□ 1.12
CHGA-202ENST00000334654 EXOC6Q8TAG9 804 aa22.03■■□□□ 1.12
CHGA-202ENST00000334654 RIC1Q4ADV7 1423 aa22.02■■□□□ 1.12
CHGA-202ENST00000334654 POLD1P28340 1107 aa22.02■■□□□ 1.12
CHGA-202ENST00000334654 C3orf67Q6ZVT6 689 aa22.02■■□□□ 1.12
CHGA-202ENST00000334654 PLA2G12BQ9BX93 195 aa22.02■■□□□ 1.12
CHGA-202ENST00000334654 TNRC6CQ9HCJ0 1690 aaKnown RBP22.02■■□□□ 1.11
CHGA-202ENST00000334654 MYH3P11055 1940 aa22.01■■□□□ 1.11
CHGA-202ENST00000334654 KIF13BQ9NQT8 1826 aa22.01■■□□□ 1.11
CHGA-202ENST00000334654 UBTFL1P0CB47 393 aaPredicted RBP22.01■■□□□ 1.11
CHGA-202ENST00000334654 GTF2E1P29083 439 aaPredicted RBP22.01■■□□□ 1.11
CHGA-202ENST00000334654 FOXO4P98177 505 aa22.01■■□□□ 1.11
CHGA-202ENST00000334654 C10orf71Q711Q0 1435 aa22■■□□□ 1.11
CHGA-202ENST00000334654 KLRG2A4D1S0 409 aaPredicted RBP21.99■■□□□ 1.11
CHGA-202ENST00000334654 PDE8AO60658 829 aa21.99■■□□□ 1.11
CHGA-202ENST00000334654 LRRFIP2Q9Y608 721 aaKnown RBP21.99■■□□□ 1.11
CHGA-202ENST00000334654 ST5P78524 1137 aa21.98■■□□□ 1.11
CHGA-202ENST00000334654 ANKRD44Q8N8A2 993 aa21.98■■□□□ 1.11
CHGA-202ENST00000334654 BRIP1Q9BX63 1249 aa21.98■■□□□ 1.11
CHGA-202ENST00000334654 NPHP1O15259 732 aa21.97■■□□□ 1.11
CHGA-202ENST00000334654 GNAI2P04899 355 aa21.97■■□□□ 1.11
CHGA-202ENST00000334654 CSF1RP07333 972 aa21.97■■□□□ 1.11
CHGA-202ENST00000334654 RABL6Q3YEC7 729 aaPredicted RBP21.97■■□□□ 1.11
CHGA-202ENST00000334654 BICC1Q9H694 974 aaKnown RBP21.97■■□□□ 1.11
CHGA-202ENST00000334654 C1orf115Q9H7X2 142 aa21.97■■□□□ 1.11
CHGA-202ENST00000334654 TTLL11Q8NHH1 800 aa21.96■■□□□ 1.11
CHGA-202ENST00000334654 CTSWP56202 376 aa21.96■■□□□ 1.11
CHGA-202ENST00000334654 SF3B3Q15393 1217 aaKnown RBP21.96■■□□□ 1.11
CHGA-202ENST00000334654 CRY2Q49AN0 593 aa21.96■■□□□ 1.11
CHGA-202ENST00000334654 CHMP4BQ9H444 224 aaKnown RBP21.96■■□□□ 1.11
CHGA-202ENST00000334654 NLRP3Q96P20 1036 aa21.95■■□□□ 1.1
CHGA-202ENST00000334654 KIAA1551Q9HCM1 1747 aa21.95■■□□□ 1.1
CHGA-202ENST00000334654 HSP90B1P14625 803 aaKnown RBP21.94■■□□□ 1.1
CHGA-202ENST00000334654 LMBR1LQ6UX01 489 aa21.94■■□□□ 1.1
CHGA-202ENST00000334654 HDAC5Q9UQL6 1122 aa21.94■■□□□ 1.1
CHGA-202ENST00000334654 TAF1P21675 1872 aa21.94■■□□□ 1.1
CHGA-202ENST00000334654 COL11A2P13942 1736 aaPredicted RBP21.93■■□□□ 1.1
CHGA-202ENST00000334654 MTX1Q13505 466 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms