RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 PHKG2P15735 406 aa13.22□□□□□ -0.29
POLR1B-202ENST00000333990 ZNF804AQ7Z570 1209 aa13.22□□□□□ -0.29
POLR1B-202ENST00000333990 ERBB4Q15303 1308 aa13.21□□□□□ -0.29
POLR1B-202ENST00000333990 CNBD1Q8NA66 436 aa13.21□□□□□ -0.29
POLR1B-202ENST00000333990 CRNKL1Q9BZJ0 848 aaKnown RBP13.21□□□□□ -0.29
POLR1B-202ENST00000333990 PDE4BQ07343 736 aa13.21□□□□□ -0.29
POLR1B-202ENST00000333990 CWF19L2Q2TBE0 894 aaKnown RBP13.21□□□□□ -0.29
POLR1B-202ENST00000333990 OGFOD1Q8N543 542 aa13.21□□□□□ -0.29
POLR1B-202ENST00000333990 HMG20BQ9P0W2 317 aa13.21□□□□□ -0.29
POLR1B-202ENST00000333990 TRIM35Q9UPQ4 493 aa13.21□□□□□ -0.29
POLR1B-202ENST00000333990 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.21□□□□□ -0.3
POLR1B-202ENST00000333990 KDM4AO75164 1064 aa13.21□□□□□ -0.3
POLR1B-202ENST00000333990 NUCB1Q02818 461 aa13.21□□□□□ -0.3
POLR1B-202ENST00000333990 TTC22Q5TAA0 569 aa13.21□□□□□ -0.3
POLR1B-202ENST00000333990 LMTK2Q8IWU2 1503 aa13.21□□□□□ -0.3
POLR1B-202ENST00000333990 PRR36Q9H6K5 1346 aa13.21□□□□□ -0.3
POLR1B-202ENST00000333990 RANBP6O60518 1105 aaKnown RBP13.2□□□□□ -0.3
POLR1B-202ENST00000333990 ZNF496Q96IT1 587 aaPredicted RBP13.2□□□□□ -0.3
POLR1B-202ENST00000333990 PHAXQ9H814 394 aaKnown RBP13.2□□□□□ -0.3
POLR1B-202ENST00000333990 CFAP45Q9UL16 551 aa13.2□□□□□ -0.3
POLR1B-202ENST00000333990 SEC63Q9UGP8 760 aaKnown RBP13.2□□□□□ -0.3
POLR1B-202ENST00000333990 AGLP35573 1532 aa13.2□□□□□ -0.3
POLR1B-202ENST00000333990 ZNF772Q68DY9 489 aaPredicted RBP13.2□□□□□ -0.3
POLR1B-202ENST00000333990 DNAJC10Q8IXB1 793 aa13.2□□□□□ -0.3
POLR1B-202ENST00000333990 FLAD1Q8NFF5 587 aa13.2□□□□□ -0.3
POLR1B-202ENST00000333990 ADGRB3O60242 1522 aa13.2□□□□□ -0.3
POLR1B-202ENST00000333990 WDR17Q8IZU2 1322 aa13.2□□□□□ -0.3
POLR1B-202ENST00000333990 PPP4R3BQ5MIZ7 849 aa13.2□□□□□ -0.3
POLR1B-202ENST00000333990 TTC41PQ6P2S7 1318 aa13.19□□□□□ -0.3
POLR1B-202ENST00000333990 FIBPO43427 364 aa13.19□□□□□ -0.3
POLR1B-202ENST00000333990 EIF4A1P60842 406 aaKnown RBP13.19□□□□□ -0.3
POLR1B-202ENST00000333990 HMGN5P82970 282 aaKnown RBP13.19□□□□□ -0.3
POLR1B-202ENST00000333990 CABP5Q9NP86 173 aa13.19□□□□□ -0.3
POLR1B-202ENST00000333990 NSFL1CQ9UNZ2 370 aaKnown RBP13.19□□□□□ -0.3
POLR1B-202ENST00000333990 GSE1Q14687 1217 aa13.19□□□□□ -0.3
POLR1B-202ENST00000333990 DCTPP1Q9H773 170 aa13.19□□□□□ -0.3
POLR1B-202ENST00000333990 ADGRL3Q9HAR2 1447 aa13.19□□□□□ -0.3
POLR1B-202ENST00000333990 PDE1AP54750 535 aa13.18□□□□□ -0.3
POLR1B-202ENST00000333990 UPF3BQ9BZI7 483 aaKnown RBP13.18□□□□□ -0.3
POLR1B-202ENST00000333990 FAM13BQ9NYF5 915 aa13.18□□□□□ -0.3
POLR1B-202ENST00000333990 PCDHB15Q9Y5E8 787 aa13.18□□□□□ -0.3
POLR1B-202ENST00000333990 CLTCL1P53675 1640 aa13.18□□□□□ -0.3
POLR1B-202ENST00000333990 IFIT3O14879 490 aaKnown RBP13.18□□□□□ -0.3
POLR1B-202ENST00000333990 KRT18P05783 430 aaKnown RBP13.18□□□□□ -0.3
POLR1B-202ENST00000333990 SPHKAPQ2M3C7 1700 aa13.18□□□□□ -0.3
POLR1B-202ENST00000333990 CEP85Q6P2H3 762 aa13.18□□□□□ -0.3
POLR1B-202ENST00000333990 JDP2Q8WYK2 163 aa13.18□□□□□ -0.3
POLR1B-202ENST00000333990 RBM17Q96I25 401 aaKnown RBP13.18□□□□□ -0.3
POLR1B-202ENST00000333990 IGSF1Q8N6C5 1336 aa13.18□□□□□ -0.3
POLR1B-202ENST00000333990 GLI2P10070 1586 aa13.18□□□□□ -0.3
POLR1B-202ENST00000333990 PDE8AO60658 829 aa13.18□□□□□ -0.3
POLR1B-202ENST00000333990 A1BGP04217 495 aa13.18□□□□□ -0.3
POLR1B-202ENST00000333990 BRINP3Q76B58 766 aa13.18□□□□□ -0.3
POLR1B-202ENST00000333990 ZBTB40Q9NUA8 1239 aa13.18□□□□□ -0.3
POLR1B-202ENST00000333990 SLC12A7Q9Y666 1083 aa13.18□□□□□ -0.3
POLR1B-202ENST00000333990 DIP2CQ9Y2E4 1556 aa13.17□□□□□ -0.3
POLR1B-202ENST00000333990 PLCG2P16885 1265 aa13.17□□□□□ -0.3
POLR1B-202ENST00000333990 CCDC178Q5BJE1 867 aa13.17□□□□□ -0.3
POLR1B-202ENST00000333990 CROCC2H7BZ55 1655 aa13.17□□□□□ -0.3
POLR1B-202ENST00000333990 APBA3O96018 575 aa13.17□□□□□ -0.3
POLR1B-202ENST00000333990 ME1P48163 572 aa13.17□□□□□ -0.3
POLR1B-202ENST00000333990 NAA16Q6N069 864 aaPredicted RBP13.17□□□□□ -0.3
POLR1B-202ENST00000333990 CATIPQ7Z7H3 387 aa13.17□□□□□ -0.3
POLR1B-202ENST00000333990 ERBB3P21860 1342 aa13.17□□□□□ -0.3
POLR1B-202ENST00000333990 MFSD6Q6ZSS7 791 aa13.16□□□□□ -0.3
POLR1B-202ENST00000333990 CEP131Q9UPN4 1083 aa13.16□□□□□ -0.3
POLR1B-202ENST00000333990 SPATA31A3Q5VYP0 1347 aa13.16□□□□□ -0.3
POLR1B-202ENST00000333990 IGHDP01880 384 aa13.16□□□□□ -0.3
POLR1B-202ENST00000333990 CYP7A1P22680 504 aa13.16□□□□□ -0.3
POLR1B-202ENST00000333990 KIF5BP33176 963 aa13.16□□□□□ -0.3
POLR1B-202ENST00000333990 QTRT2Q9H974 415 aaKnown RBP13.16□□□□□ -0.3
POLR1B-202ENST00000333990 TTLL12Q14166 644 aaPredicted RBP13.16□□□□□ -0.3
POLR1B-202ENST00000333990 NCOA7Q8NI08 942 aa13.16□□□□□ -0.3
POLR1B-202ENST00000333990 BMP2KQ9NSY1 1161 aaPredicted RBP13.16□□□□□ -0.3
POLR1B-202ENST00000333990 LIMCH1Q9UPQ0 1083 aa13.16□□□□□ -0.3
POLR1B-202ENST00000333990 ZMYM4Q5VZL5 1548 aa13.16□□□□□ -0.3
POLR1B-202ENST00000333990 TSPY2A6NKD2 308 aa13.16□□□□□ -0.3
POLR1B-202ENST00000333990 ZNF76P36508 570 aa13.16□□□□□ -0.3
POLR1B-202ENST00000333990 TBC1D9Q6ZT07 1266 aa13.15□□□□□ -0.3
POLR1B-202ENST00000333990 IL17REQ8NFR9 667 aa13.15□□□□□ -0.3
POLR1B-202ENST00000333990 FAM89AQ96GI7 184 aa13.15□□□□□ -0.3
POLR1B-202ENST00000333990 EYA2O00167 538 aa13.15□□□□□ -0.3
POLR1B-202ENST00000333990 GIGYF1O75420 1035 aaPredicted RBP13.15□□□□□ -0.3
POLR1B-202ENST00000333990 CCDC96Q2M329 555 aa13.15□□□□□ -0.3
POLR1B-202ENST00000333990 EPS15P42566 896 aa13.15□□□□□ -0.3
POLR1B-202ENST00000333990 WWC2Q6AWC2 1192 aa13.15□□□□□ -0.3
POLR1B-202ENST00000333990 G2E3Q7L622 706 aa13.15□□□□□ -0.3
POLR1B-202ENST00000333990 FEZ1Q99689 392 aa13.15□□□□□ -0.3
POLR1B-202ENST00000333990 BLMP54132 1417 aaPredicted RBP13.14□□□□□ -0.31
POLR1B-202ENST00000333990 GNAT2P19087 354 aa13.14□□□□□ -0.31
POLR1B-202ENST00000333990 TRAF1Q13077 416 aa13.14□□□□□ -0.31
POLR1B-202ENST00000333990 NFKBIBQ15653 356 aa13.14□□□□□ -0.31
POLR1B-202ENST00000333990 NOC3LQ8WTT2 800 aaKnown RBP13.14□□□□□ -0.31
POLR1B-202ENST00000333990 PA2G4Q9UQ80 394 aaKnown RBP13.14□□□□□ -0.31
POLR1B-202ENST00000333990 PRPF40AO75400 957 aaKnown RBP13.14□□□□□ -0.31
POLR1B-202ENST00000333990 STIM1Q13586 685 aa13.14□□□□□ -0.31
POLR1B-202ENST00000333990 FAM196AQ6ZSG2 479 aa13.14□□□□□ -0.31
POLR1B-202ENST00000333990 BICC1Q9H694 974 aaKnown RBP13.14□□□□□ -0.31
POLR1B-202ENST00000333990 CNNM2Q9H8M5 875 aa13.14□□□□□ -0.31
POLR1B-202ENST00000333990 THRAP3Q9Y2W1 955 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms