RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 NOL10Q9BSC4 688 aaKnown RBP13.16□□□□□ -0.3
CCDC87-201ENST00000333861 ZCCHC17Q9NP64 241 aaKnown RBP13.16□□□□□ -0.3
CCDC87-201ENST00000333861 IFIT2P09913 472 aaKnown RBP13.16□□□□□ -0.3
CCDC87-201ENST00000333861 MCM2P49736 904 aa13.16□□□□□ -0.3
CCDC87-201ENST00000333861 GYS2P54840 703 aa13.16□□□□□ -0.3
CCDC87-201ENST00000333861 GUCY1B3Q02153 619 aa13.16□□□□□ -0.3
CCDC87-201ENST00000333861 MTHFSDQ2M296 383 aaKnown RBP13.16□□□□□ -0.3
CCDC87-201ENST00000333861 BICD2Q8TD16 824 aa13.16□□□□□ -0.3
CCDC87-201ENST00000333861 FMNL2Q96PY5 1086 aa13.16□□□□□ -0.3
CCDC87-201ENST00000333861 SOS1Q07889 1333 aaPredicted RBP13.15□□□□□ -0.3
CCDC87-201ENST00000333861 GOLGA6L4A6NEF3 574 aa13.15□□□□□ -0.3
CCDC87-201ENST00000333861 JAK2O60674 1132 aa13.15□□□□□ -0.3
CCDC87-201ENST00000333861 NBPF7P0C2Y1 421 aaPredicted RBP13.15□□□□□ -0.3
CCDC87-201ENST00000333861 GOLGA8FQ08AF8 430 aa13.15□□□□□ -0.3
CCDC87-201ENST00000333861 GOLGA8DPQ0D2H9 430 aa13.15□□□□□ -0.3
CCDC87-201ENST00000333861 ZNF397Q8NF99 534 aaPredicted RBP13.15□□□□□ -0.3
CCDC87-201ENST00000333861 FAM200AQ8TCP9 573 aa13.15□□□□□ -0.3
CCDC87-201ENST00000333861 FAM227BQ96M60 508 aa13.15□□□□□ -0.3
CCDC87-201ENST00000333861 TNMDQ9H2S6 317 aa13.15□□□□□ -0.3
CCDC87-201ENST00000333861 TRIM66O15016 1216 aa13.15□□□□□ -0.3
CCDC87-201ENST00000333861 HSPA4P34932 840 aa13.15□□□□□ -0.3
CCDC87-201ENST00000333861 NUP62CLQ9H1M0 184 aa13.15□□□□□ -0.3
CCDC87-201ENST00000333861 PDRG1Q9NUG6 133 aa13.15□□□□□ -0.3
CCDC87-201ENST00000333861 TPCN1Q9ULQ1 816 aa13.15□□□□□ -0.3
CCDC87-201ENST00000333861 SRGAP3O43295 1099 aa13.14□□□□□ -0.31
CCDC87-201ENST00000333861 TNNT3P45378 269 aaPredicted RBP13.14□□□□□ -0.31
CCDC87-201ENST00000333861 RAD51AP2Q09MP3 1159 aa13.14□□□□□ -0.31
CCDC87-201ENST00000333861 FLIIQ13045 1269 aa13.14□□□□□ -0.31
CCDC87-201ENST00000333861 FAM177A1Q8N128 213 aaPredicted RBP13.14□□□□□ -0.31
CCDC87-201ENST00000333861 MAP2P11137 1827 aaKnown RBP13.14□□□□□ -0.31
CCDC87-201ENST00000333861 PNPLA6Q8IY17 1366 aa13.14□□□□□ -0.31
CCDC87-201ENST00000333861 CHL1O00533 1208 aa13.14□□□□□ -0.31
CCDC87-201ENST00000333861 SLFNL1Q499Z3 407 aa13.14□□□□□ -0.31
CCDC87-201ENST00000333861 LARP1Q6PKG0 1096 aaKnown RBP13.14□□□□□ -0.31
CCDC87-201ENST00000333861 CALCOCO1Q9P1Z2 691 aa13.14□□□□□ -0.31
CCDC87-201ENST00000333861 FEZ2Q9UHY8 353 aaPredicted RBP13.14□□□□□ -0.31
CCDC87-201ENST00000333861 LIMCH1Q9UPQ0 1083 aa13.14□□□□□ -0.31
CCDC87-201ENST00000333861 ZNF142P52746 1687 aaPredicted RBP13.14□□□□□ -0.31
CCDC87-201ENST00000333861 ZNF75DP51815 510 aa13.13□□□□□ -0.31
CCDC87-201ENST00000333861 PTPN14Q15678 1187 aa13.13□□□□□ -0.31
CCDC87-201ENST00000333861 C11orf57Q6ZUT1 292 aaPredicted RBP13.13□□□□□ -0.31
CCDC87-201ENST00000333861 PROSER2Q86WR7 435 aaPredicted RBP13.13□□□□□ -0.31
CCDC87-201ENST00000333861 SIL1Q9H173 461 aa13.13□□□□□ -0.31
CCDC87-201ENST00000333861 CPS1P31327 1500 aa13.13□□□□□ -0.31
CCDC87-201ENST00000333861 MAP3K11Q16584 847 aa13.13□□□□□ -0.31
CCDC87-201ENST00000333861 NCBP3Q53F19 620 aaKnown RBP13.13□□□□□ -0.31
CCDC87-201ENST00000333861 C10orf67Q8IYJ2 551 aa13.13□□□□□ -0.31
CCDC87-201ENST00000333861 KLHDC4Q8TBB5 520 aa13.13□□□□□ -0.31
CCDC87-201ENST00000333861 LSG1Q9H089 658 aaKnown RBP13.13□□□□□ -0.31
CCDC87-201ENST00000333861 IRX3P78415 501 aaPredicted RBP13.12□□□□□ -0.31
CCDC87-201ENST00000333861 ST5P78524 1137 aa13.12□□□□□ -0.31
CCDC87-201ENST00000333861 TTC14Q96N46 770 aa13.12□□□□□ -0.31
CCDC87-201ENST00000333861 CCDC8Q9H0W5 538 aaPredicted RBP13.12□□□□□ -0.31
CCDC87-201ENST00000333861 HYPKQ9NX55 129 aa13.12□□□□□ -0.31
CCDC87-201ENST00000333861 RSPH14Q9UHP6 348 aa13.12□□□□□ -0.31
CCDC87-201ENST00000333861 LCMT1Q9UIC8 334 aa13.12□□□□□ -0.31
CCDC87-201ENST00000333861 PAXBP1Q9Y5B6 917 aa13.12□□□□□ -0.31
CCDC87-201ENST00000333861 TULP2O00295 520 aa13.12□□□□□ -0.31
CCDC87-201ENST00000333861 HSP90AA4PQ58FG1 418 aa13.12□□□□□ -0.31
CCDC87-201ENST00000333861 STK11IPQ8N1F8 1099 aa13.12□□□□□ -0.31
CCDC87-201ENST00000333861 TMEM87AQ8NBN3 555 aa13.12□□□□□ -0.31
CCDC87-201ENST00000333861 NGDNQ8NEJ9 315 aaKnown RBP13.12□□□□□ -0.31
CCDC87-201ENST00000333861 SALL3Q9BXA9 1300 aa13.12□□□□□ -0.31
CCDC87-201ENST00000333861 USP44Q9H0E7 712 aa13.12□□□□□ -0.31
CCDC87-201ENST00000333861 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.12□□□□□ -0.31
CCDC87-201ENST00000333861 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.12□□□□□ -0.31
CCDC87-201ENST00000333861 ERBB3P21860 1342 aa13.11□□□□□ -0.31
CCDC87-201ENST00000333861 SEC31AO94979 1220 aaKnown RBP13.11□□□□□ -0.31
CCDC87-201ENST00000333861 TPM3P06753 285 aa13.11□□□□□ -0.31
CCDC87-201ENST00000333861 SKILP12757 684 aa13.11□□□□□ -0.31
CCDC87-201ENST00000333861 ZNF165P49910 485 aa13.11□□□□□ -0.31
CCDC87-201ENST00000333861 RAB11FIP4Q86YS3 637 aa13.11□□□□□ -0.31
CCDC87-201ENST00000333861 STK31Q9BXU1 1019 aa13.11□□□□□ -0.31
CCDC87-201ENST00000333861 ACEP12821 1306 aa13.11□□□□□ -0.31
CCDC87-201ENST00000333861 SGSM2O43147 1006 aa13.11□□□□□ -0.31
CCDC87-201ENST00000333861 UBTFL1P0CB47 393 aaPredicted RBP13.11□□□□□ -0.31
CCDC87-201ENST00000333861 RAD50Q92878 1312 aa13.1□□□□□ -0.31
CCDC87-201ENST00000333861 BIN1O00499 593 aa13.1□□□□□ -0.31
CCDC87-201ENST00000333861 ATP8B2P98198 1209 aa13.1□□□□□ -0.31
CCDC87-201ENST00000333861 NFATC2IPQ8NCF5 419 aa13.1□□□□□ -0.31
CCDC87-201ENST00000333861 RHPN1Q8TCX5 695 aa13.1□□□□□ -0.31
CCDC87-201ENST00000333861 SPATA32Q96LK8 384 aa13.1□□□□□ -0.31
CCDC87-201ENST00000333861 SEC62Q99442 399 aaKnown RBP13.1□□□□□ -0.31
CCDC87-201ENST00000333861 DLG5Q8TDM6 1919 aa13.1□□□□□ -0.31
CCDC87-201ENST00000333861 RAB11FIP3O75154 756 aa13.1□□□□□ -0.31
CCDC87-201ENST00000333861 SYT10Q6XYQ8 523 aa13.1□□□□□ -0.31
CCDC87-201ENST00000333861 KCNQ3O43525 872 aa13.09□□□□□ -0.31
CCDC87-201ENST00000333861 CYP2C19P33261 490 aa13.09□□□□□ -0.31
CCDC87-201ENST00000333861 LMOD3Q0VAK6 560 aa13.09□□□□□ -0.31
CCDC87-201ENST00000333861 KRBA2Q6ZNG9 492 aa13.09□□□□□ -0.31
CCDC87-201ENST00000333861 LRRC8AQ8IWT6 810 aa13.09□□□□□ -0.31
CCDC87-201ENST00000333861 PI4K2BQ8TCG2 481 aa13.09□□□□□ -0.31
CCDC87-201ENST00000333861 PGBD1Q96JS3 809 aa13.09□□□□□ -0.31
CCDC87-201ENST00000333861 OSBPL3Q9H4L5 887 aa13.09□□□□□ -0.31
CCDC87-201ENST00000333861 CLCN6P51797 869 aa13.09□□□□□ -0.31
CCDC87-201ENST00000333861 SKIDA1Q1XH10 827 aa13.09□□□□□ -0.31
CCDC87-201ENST00000333861 MAP3K19Q56UN5 1328 aa13.09□□□□□ -0.31
CCDC87-201ENST00000333861 CHST3Q7LGC8 479 aa13.09□□□□□ -0.31
CCDC87-201ENST00000333861 CCDC34Q96HJ3 373 aa13.09□□□□□ -0.31
CCDC87-201ENST00000333861 BOLA2Q9H3K6 86 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms