RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 TXNRD1Q16881 649 aa28.96■■■□□ 2.23
TSEN54-201ENST00000333213 ANKRD45Q5TZF3 282 aa28.96■■■□□ 2.23
TSEN54-201ENST00000333213 ILDR1Q86SU0 546 aaPredicted RBP28.96■■■□□ 2.23
TSEN54-201ENST00000333213 HDAC5Q9UQL6 1122 aa28.96■■■□□ 2.23
TSEN54-201ENST00000333213 PLSCR1O15162 318 aa28.96■■■□□ 2.23
TSEN54-201ENST00000333213 APBA3O96018 575 aa28.96■■■□□ 2.23
TSEN54-201ENST00000333213 ERICH6Q7L0X2 663 aa28.96■■■□□ 2.23
TSEN54-201ENST00000333213 CHD1LQ86WJ1 897 aa28.96■■■□□ 2.23
TSEN54-201ENST00000333213 LNPKQ9C0E8 428 aa28.96■■■□□ 2.23
TSEN54-201ENST00000333213 EXOC6BQ9Y2D4 811 aa28.95■■■□□ 2.23
TSEN54-201ENST00000333213 BCORQ6W2J9 1755 aa28.95■■■□□ 2.22
TSEN54-201ENST00000333213 RTCBQ9Y3I0 505 aaKnown RBP28.94■■■□□ 2.22
TSEN54-201ENST00000333213 TNS1Q9HBL0 1735 aaKnown RBP28.94■■■□□ 2.22
TSEN54-201ENST00000333213 RABL6Q3YEC7 729 aaPredicted RBP28.93■■■□□ 2.22
TSEN54-201ENST00000333213 FOXO4P98177 505 aa28.92■■■□□ 2.22
TSEN54-201ENST00000333213 SYNE4Q8N205 404 aa28.92■■■□□ 2.22
TSEN54-201ENST00000333213 FAM89AQ96GI7 184 aa28.92■■■□□ 2.22
TSEN54-201ENST00000333213 BCL2L12Q9HB09 334 aa28.92■■■□□ 2.22
TSEN54-201ENST00000333213 PCCAP05165 728 aaPredicted RBP28.91■■■□□ 2.22
TSEN54-201ENST00000333213 ZBTB38Q8NAP3 1195 aaPredicted RBP28.91■■■□□ 2.22
TSEN54-201ENST00000333213 ARHGEF1Q92888 912 aaKnown RBP28.91■■■□□ 2.22
TSEN54-201ENST00000333213 APBB1O00213 710 aa28.9■■■□□ 2.22
TSEN54-201ENST00000333213 AK7Q96M32 723 aa28.9■■■□□ 2.22
TSEN54-201ENST00000333213 SRP68Q9UHB9 627 aaKnown RBP28.9■■■□□ 2.22
TSEN54-201ENST00000333213 NARFQ9UHQ1 456 aa28.9■■■□□ 2.22
TSEN54-201ENST00000333213 SCN7AQ01118 1682 aa28.89■■■□□ 2.22
TSEN54-201ENST00000333213 SMARCA5O60264 1052 aaPredicted RBP28.88■■■□□ 2.21
TSEN54-201ENST00000333213 SUSD4Q5VX71 490 aa28.88■■■□□ 2.21
TSEN54-201ENST00000333213 USPL1Q5W0Q7 1092 aa28.88■■■□□ 2.21
TSEN54-201ENST00000333213 CLEC4GQ6UXB4 293 aa28.88■■■□□ 2.21
TSEN54-201ENST00000333213 PHF14O94880 888 aa28.88■■■□□ 2.21
TSEN54-201ENST00000333213 PA2G4Q9UQ80 394 aaKnown RBP28.88■■■□□ 2.21
TSEN54-201ENST00000333213 UBR3Q6ZT12 1888 aa28.87■■■□□ 2.21
TSEN54-201ENST00000333213 SURF6O75683 361 aaKnown RBP28.87■■■□□ 2.21
TSEN54-201ENST00000333213 C4AP0C0L4 1744 aa28.87■■■□□ 2.21
TSEN54-201ENST00000333213 LMBR1LQ6UX01 489 aa28.86■■■□□ 2.21
TSEN54-201ENST00000333213 NIP7Q9Y221 180 aaKnown RBP eCLIP28.86■■■□□ 2.21
TSEN54-201ENST00000333213 TRMT112Q9UI30 125 aaKnown RBP28.86■■■□□ 2.21
TSEN54-201ENST00000333213 NOP58Q9Y2X3 529 aaKnown RBP28.86■■■□□ 2.21
TSEN54-201ENST00000333213 RFX5P48382 616 aaPredicted RBP28.85■■■□□ 2.21
TSEN54-201ENST00000333213 TRAPPC3LQ5T215 181 aa28.85■■■□□ 2.21
TSEN54-201ENST00000333213 C16orf71Q8IYS4 520 aaPredicted RBP28.85■■■□□ 2.21
TSEN54-201ENST00000333213 KLHDC4Q8TBB5 520 aa28.85■■■□□ 2.21
TSEN54-201ENST00000333213 ZNF652Q9Y2D9 606 aa28.85■■■□□ 2.21
TSEN54-201ENST00000333213 CDHR2Q9BYE9 1310 aa28.84■■■□□ 2.21
TSEN54-201ENST00000333213 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.84■■■□□ 2.21
TSEN54-201ENST00000333213 RGL2O15211 777 aa28.83■■■□□ 2.21
TSEN54-201ENST00000333213 PLA2G12BQ9BX93 195 aa28.83■■■□□ 2.21
TSEN54-201ENST00000333213 USP42Q9H9J4 1324 aaKnown RBP28.83■■■□□ 2.21
TSEN54-201ENST00000333213 TBC1D9BQ66K14 1250 aa28.82■■■□□ 2.2
TSEN54-201ENST00000333213 FAM177BA6PVY3 158 aa28.82■■■□□ 2.2
TSEN54-201ENST00000333213 ZPR1O75312 459 aa28.82■■■□□ 2.2
TSEN54-201ENST00000333213 PARP10Q53GL7 1025 aa28.82■■■□□ 2.2
TSEN54-201ENST00000333213 OTUD7AQ8TE49 926 aaPredicted RBP28.82■■■□□ 2.2
TSEN54-201ENST00000333213 BCL11AQ9H165 835 aa28.82■■■□□ 2.2
TSEN54-201ENST00000333213 RFC4P35249 363 aa28.81■■■□□ 2.2
TSEN54-201ENST00000333213 ZNF827Q17R98 1081 aa28.81■■■□□ 2.2
TSEN54-201ENST00000333213 LRRCC1Q9C099 1032 aa28.81■■■□□ 2.2
TSEN54-201ENST00000333213 NTSR2O95665 410 aa28.81■■■□□ 2.2
TSEN54-201ENST00000333213 ADRA2BP18089 450 aa28.81■■■□□ 2.2
TSEN54-201ENST00000333213 PTPN12Q05209 780 aaKnown RBP28.81■■■□□ 2.2
TSEN54-201ENST00000333213 IRS4O14654 1257 aaPredicted RBP28.8■■■□□ 2.2
TSEN54-201ENST00000333213 UTP14AQ9BVJ6 771 aaKnown RBP28.8■■■□□ 2.2
TSEN54-201ENST00000333213 RGPD3A6NKT7 1758 aaPredicted RBP28.79■■■□□ 2.2
TSEN54-201ENST00000333213 RGPD4Q7Z3J3 1758 aa28.79■■■□□ 2.2
TSEN54-201ENST00000333213 AKT1S1Q96B36 256 aa28.79■■■□□ 2.2
TSEN54-201ENST00000333213 RAB11FIP3O75154 756 aa28.79■■■□□ 2.2
TSEN54-201ENST00000333213 CSF1RP07333 972 aa28.79■■■□□ 2.2
TSEN54-201ENST00000333213 BICDL1Q6ZP65 573 aa28.79■■■□□ 2.2
TSEN54-201ENST00000333213 COPRSQ9NQ92 184 aa28.79■■■□□ 2.2
TSEN54-201ENST00000333213 SSFA2P28290 1259 aa28.78■■■□□ 2.2
TSEN54-201ENST00000333213 RHPN1Q8TCX5 695 aa28.78■■■□□ 2.2
TSEN54-201ENST00000333213 CHMP3Q9Y3E7 222 aa28.78■■■□□ 2.2
TSEN54-201ENST00000333213 SH3TC1Q8TE82 1336 aa28.78■■■□□ 2.2
TSEN54-201ENST00000333213 IL1RAPL2Q9NP60 686 aa28.77■■■□□ 2.2
TSEN54-201ENST00000333213 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.77■■■□□ 2.2
TSEN54-201ENST00000333213 EN1Q05925 392 aaPredicted RBP28.77■■■□□ 2.2
TSEN54-201ENST00000333213 NUTM1Q86Y26 1132 aa28.77■■■□□ 2.2
TSEN54-201ENST00000333213 PLEKHM2Q8IWE5 1019 aa28.77■■■□□ 2.2
TSEN54-201ENST00000333213 CAMKK2Q96RR4 588 aa28.77■■■□□ 2.2
TSEN54-201ENST00000333213 SIL1Q9H173 461 aa28.77■■■□□ 2.2
TSEN54-201ENST00000333213 EZH2Q15910 746 aaKnown RBP28.76■■■□□ 2.19
TSEN54-201ENST00000333213 TTLL11Q8NHH1 800 aa28.76■■■□□ 2.19
TSEN54-201ENST00000333213 CCDC85AQ96PX6 553 aaPredicted RBP28.76■■■□□ 2.19
TSEN54-201ENST00000333213 SASH1O94885 1247 aa28.75■■■□□ 2.19
TSEN54-201ENST00000333213 HSP90AB4PQ58FF6 505 aa28.75■■■□□ 2.19
TSEN54-201ENST00000333213 KIF1BPQ96EK5 621 aa28.75■■■□□ 2.19
TSEN54-201ENST00000333213 HCLS1P14317 486 aaPredicted RBP28.75■■■□□ 2.19
TSEN54-201ENST00000333213 FAM161AQ3B820 660 aa28.75■■■□□ 2.19
TSEN54-201ENST00000333213 ZBTB47Q9UFB7 747 aaPredicted RBP28.75■■■□□ 2.19
TSEN54-201ENST00000333213 PDE8AO60658 829 aa28.74■■■□□ 2.19
TSEN54-201ENST00000333213 SALL3Q9BXA9 1300 aa28.74■■■□□ 2.19
TSEN54-201ENST00000333213 CTSWP56202 376 aa28.73■■■□□ 2.19
TSEN54-201ENST00000333213 COL24A1Q17RW2 1714 aa28.73■■■□□ 2.19
TSEN54-201ENST00000333213 DDX60Q8IY21 1712 aaKnown RBP28.73■■■□□ 2.19
TSEN54-201ENST00000333213 OS9Q13438 667 aaPredicted RBP28.73■■■□□ 2.19
TSEN54-201ENST00000333213 ZNF594Q96JF6 807 aaPredicted RBP28.73■■■□□ 2.19
TSEN54-201ENST00000333213 GYS1P13807 737 aa28.72■■■□□ 2.19
TSEN54-201ENST00000333213 HMGB2P26583 209 aaKnown RBP28.72■■■□□ 2.19
TSEN54-201ENST00000333213 SETDB2Q96T68 719 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms