RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 CEMIPQ8WUJ3 1361 aa12.18□□□□□ -0.46
PRAMEF1-201ENST00000332296 SYCE3A1L190 88 aa12.18□□□□□ -0.46
PRAMEF1-201ENST00000332296 ANAPC15P60006 121 aa12.18□□□□□ -0.46
PRAMEF1-201ENST00000332296 MPRIPQ6WCQ1 1025 aa12.18□□□□□ -0.46
PRAMEF1-201ENST00000332296 PPP1R42Q7Z4L9 355 aa12.18□□□□□ -0.46
PRAMEF1-201ENST00000332296 ZCRB1Q8TBF4 217 aaKnown RBP12.18□□□□□ -0.46
PRAMEF1-201ENST00000332296 LGR6Q9HBX8 967 aa12.18□□□□□ -0.46
PRAMEF1-201ENST00000332296 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.18□□□□□ -0.46
PRAMEF1-201ENST00000332296 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.18□□□□□ -0.46
PRAMEF1-201ENST00000332296 AOX1Q06278 1338 aa12.18□□□□□ -0.46
PRAMEF1-201ENST00000332296 EIF2S2P20042 333 aaKnown RBP12.18□□□□□ -0.46
PRAMEF1-201ENST00000332296 MCM2P49736 904 aa12.18□□□□□ -0.46
PRAMEF1-201ENST00000332296 PI4K2BQ8TCG2 481 aa12.18□□□□□ -0.46
PRAMEF1-201ENST00000332296 IL17RAQ96F46 866 aa12.18□□□□□ -0.46
PRAMEF1-201ENST00000332296 SRCIN1Q9C0H9 1055 aa12.18□□□□□ -0.46
PRAMEF1-201ENST00000332296 SHANK3Q9BYB0 1731 aa12.18□□□□□ -0.46
PRAMEF1-201ENST00000332296 CYP27B1O15528 508 aa12.17□□□□□ -0.46
PRAMEF1-201ENST00000332296 SURF6O75683 361 aaKnown RBP12.17□□□□□ -0.46
PRAMEF1-201ENST00000332296 NBPF7P0C2Y1 421 aaPredicted RBP12.17□□□□□ -0.46
PRAMEF1-201ENST00000332296 PHKG2P15735 406 aa12.17□□□□□ -0.46
PRAMEF1-201ENST00000332296 VPS72Q15906 364 aa12.17□□□□□ -0.46
PRAMEF1-201ENST00000332296 DCAF8Q5TAQ9 597 aa12.17□□□□□ -0.46
PRAMEF1-201ENST00000332296 ZSCAN30Q86W11 494 aa12.17□□□□□ -0.46
PRAMEF1-201ENST00000332296 ANP32BQ92688 251 aaKnown RBP12.17□□□□□ -0.46
PRAMEF1-201ENST00000332296 AK7Q96M32 723 aa12.17□□□□□ -0.46
PRAMEF1-201ENST00000332296 KCNQ3O43525 872 aa12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 ANXA1P04083 346 aa12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 LRSAM1Q6UWE0 723 aa12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 IFNL2Q8IZJ0 200 aa12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 RHPN1Q8TCX5 695 aa12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 DDX54Q8TDD1 881 aaKnown RBP12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 BABAM1Q9NWV8 329 aa12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 CHPF2Q9P2E5 772 aa12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 DISP2A7MBM2 1401 aa12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 HSPA4P34932 840 aa12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 FOXD4L6Q3SYB3 417 aaPredicted RBP12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 FOXD4L3Q6VB84 417 aaPredicted RBP12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 INTS4Q96HW7 963 aaKnown RBP12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 PDLIM2Q96JY6 352 aa12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 SGIP1Q9BQI5 828 aa12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 THRAP3Q9Y2W1 955 aaKnown RBP12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 SCN11AQ9UI33 1791 aa12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 PCDH11XQ9BZA7 1347 aa12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 PCDH11YQ9BZA8 1340 aa12.16□□□□□ -0.46
PRAMEF1-201ENST00000332296 RPAP1Q9BWH6 1393 aaPredicted RBP12.15□□□□□ -0.46
PRAMEF1-201ENST00000332296 PLEKHG2Q9H7P9 1386 aa12.15□□□□□ -0.46
PRAMEF1-201ENST00000332296 SRGAP3O43295 1099 aa12.15□□□□□ -0.46
PRAMEF1-201ENST00000332296 EIF4A1P60842 406 aaKnown RBP12.15□□□□□ -0.46
PRAMEF1-201ENST00000332296 RGS22Q8NE09 1264 aa12.15□□□□□ -0.46
PRAMEF1-201ENST00000332296 GDPD2Q9HCC8 539 aa12.15□□□□□ -0.46
PRAMEF1-201ENST00000332296 RNMTO43148 476 aaKnown RBP12.15□□□□□ -0.47
PRAMEF1-201ENST00000332296 FAM98CQ17RN3 349 aaKnown RBP12.15□□□□□ -0.47
PRAMEF1-201ENST00000332296 RAD50Q92878 1312 aa12.14□□□□□ -0.47
PRAMEF1-201ENST00000332296 ADCY9O60503 1353 aa12.14□□□□□ -0.47
PRAMEF1-201ENST00000332296 SGSM2O43147 1006 aa12.14□□□□□ -0.47
PRAMEF1-201ENST00000332296 RAB11FIP3O75154 756 aa12.14□□□□□ -0.47
PRAMEF1-201ENST00000332296 BEND3Q5T5X7 828 aa12.14□□□□□ -0.47
PRAMEF1-201ENST00000332296 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.14□□□□□ -0.47
PRAMEF1-201ENST00000332296 ZBTB12Q9Y330 459 aaPredicted RBP12.14□□□□□ -0.47
PRAMEF1-201ENST00000332296 PI4KAP2A4QPH2 592 aa12.13□□□□□ -0.47
PRAMEF1-201ENST00000332296 EXOC5O00471 708 aa12.13□□□□□ -0.47
PRAMEF1-201ENST00000332296 GADD45BO75293 160 aaPredicted RBP12.13□□□□□ -0.47
PRAMEF1-201ENST00000332296 MBD3O95983 291 aa12.13□□□□□ -0.47
PRAMEF1-201ENST00000332296 PI4KAP1Q8N8J0 262 aa12.13□□□□□ -0.47
PRAMEF1-201ENST00000332296 SNX14Q9Y5W7 946 aa12.13□□□□□ -0.47
PRAMEF1-201ENST00000332296 KDM6AO15550 1401 aaPredicted RBP12.13□□□□□ -0.47
PRAMEF1-201ENST00000332296 TEFQ10587 303 aa12.13□□□□□ -0.47
PRAMEF1-201ENST00000332296 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
PRAMEF1-201ENST00000332296 RNF214Q8ND24 703 aa12.13□□□□□ -0.47
PRAMEF1-201ENST00000332296 DNAAF4Q8WXU2 420 aa12.13□□□□□ -0.47
PRAMEF1-201ENST00000332296 KIF1BPQ96EK5 621 aa12.13□□□□□ -0.47
PRAMEF1-201ENST00000332296 LARP6Q9BRS8 491 aaKnown RBP12.13□□□□□ -0.47
PRAMEF1-201ENST00000332296 CDCA7Q9BWT1 371 aaPredicted RBP12.13□□□□□ -0.47
PRAMEF1-201ENST00000332296 LSG1Q9H089 658 aaKnown RBP12.13□□□□□ -0.47
PRAMEF1-201ENST00000332296 ADAMTS7Q9UKP4 1686 aa12.12□□□□□ -0.47
PRAMEF1-201ENST00000332296 A0A0G2JS52 829 aa12.12□□□□□ -0.47
PRAMEF1-201ENST00000332296 MSNP26038 577 aaKnown RBP12.12□□□□□ -0.47
PRAMEF1-201ENST00000332296 DDB1Q16531 1140 aa12.12□□□□□ -0.47
PRAMEF1-201ENST00000332296 DCAF5Q96JK2 942 aa12.12□□□□□ -0.47
PRAMEF1-201ENST00000332296 GJD4Q96KN9 370 aaPredicted RBP12.12□□□□□ -0.47
PRAMEF1-201ENST00000332296 TTC14Q96N46 770 aa12.12□□□□□ -0.47
PRAMEF1-201ENST00000332296 TRPC5Q9UL62 973 aaPredicted RBP12.12□□□□□ -0.47
PRAMEF1-201ENST00000332296 E2F4Q16254 413 aa12.12□□□□□ -0.47
PRAMEF1-201ENST00000332296 QTRT2Q9H974 415 aaKnown RBP12.12□□□□□ -0.47
PRAMEF1-201ENST00000332296 GLI3P10071 1580 aa12.12□□□□□ -0.47
PRAMEF1-201ENST00000332296 SIPA1L3O60292 1781 aaPredicted RBP12.11□□□□□ -0.47
PRAMEF1-201ENST00000332296 EP400Q96L91 3159 aa12.11□□□□□ -0.47
PRAMEF1-201ENST00000332296 CPA1P15085 419 aa12.11□□□□□ -0.47
PRAMEF1-201ENST00000332296 CWC27Q6UX04 472 aaKnown RBP12.11□□□□□ -0.47
PRAMEF1-201ENST00000332296 MTMR7Q9Y216 660 aa12.11□□□□□ -0.47
PRAMEF1-201ENST00000332296 ATRNO75882 1429 aa12.11□□□□□ -0.47
PRAMEF1-201ENST00000332296 TNS2Q63HR2 1409 aa12.11□□□□□ -0.47
PRAMEF1-201ENST00000332296 EPB41L2O43491 1005 aaKnown RBP12.11□□□□□ -0.47
PRAMEF1-201ENST00000332296 DTNBO60941 627 aa12.11□□□□□ -0.47
PRAMEF1-201ENST00000332296 AK2P54819 239 aa12.11□□□□□ -0.47
PRAMEF1-201ENST00000332296 KIAA1211Q6ZU35 1233 aa12.11□□□□□ -0.47
PRAMEF1-201ENST00000332296 CNTROBQ8N137 903 aa12.11□□□□□ -0.47
PRAMEF1-201ENST00000332296 NOL7Q9UMY1 257 aaKnown RBP12.11□□□□□ -0.47
PRAMEF1-201ENST00000332296 LARGE1O95461 756 aa12.1□□□□□ -0.47
PRAMEF1-201ENST00000332296 HOXB7P09629 217 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms