RNA–Protein interactions for RNA: ENST00000331559.9

MEIS3-201, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 2,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-201ENST00000331559 SIL1Q9H173 461 aa28.07■■■□□ 2.08
MEIS3-201ENST00000331559 CASP7P55210 303 aa28.07■■■□□ 2.08
MEIS3-201ENST00000331559 MCTP1Q6DN14 999 aa28.07■■■□□ 2.08
MEIS3-201ENST00000331559 DDX49Q9Y6V7 483 aaKnown RBP28.07■■■□□ 2.08
MEIS3-201ENST00000331559 NUP188Q5SRE5 1749 aa28.06■■■□□ 2.08
MEIS3-201ENST00000331559 ATP5J2-PTCD1G3V325 749 aa28.06■■■□□ 2.08
MEIS3-201ENST00000331559 PTCD1O75127 700 aaKnown RBP28.06■■■□□ 2.08
MEIS3-201ENST00000331559 RFX5P48382 616 aaPredicted RBP28.06■■■□□ 2.08
MEIS3-201ENST00000331559 TMOD3Q9NYL9 352 aa28.06■■■□□ 2.08
MEIS3-201ENST00000331559 CWC27Q6UX04 472 aaKnown RBP28.06■■■□□ 2.08
MEIS3-201ENST00000331559 TMX3Q96JJ7 454 aa28.05■■■□□ 2.08
MEIS3-201ENST00000331559 TOGARAM1Q9Y4F4 1720 aa28.05■■■□□ 2.08
MEIS3-201ENST00000331559 COL14A1Q05707 1796 aaKnown RBP28.05■■■□□ 2.08
MEIS3-201ENST00000331559 CCDC8Q9H0W5 538 aaPredicted RBP28.04■■■□□ 2.08
MEIS3-201ENST00000331559 CWC25Q9NXE8 425 aaPredicted RBP28.04■■■□□ 2.08
MEIS3-201ENST00000331559 H7C1W4 665 aa28.04■■■□□ 2.08
MEIS3-201ENST00000331559 PTPN12Q05209 780 aaKnown RBP28.04■■■□□ 2.08
MEIS3-201ENST00000331559 A1BGP04217 495 aa28.03■■■□□ 2.08
MEIS3-201ENST00000331559 BTG4Q9NY30 223 aa28.03■■■□□ 2.08
MEIS3-201ENST00000331559 CUL4AQ13619 759 aa28.03■■■□□ 2.08
MEIS3-201ENST00000331559 TTLL7Q6ZT98 887 aa28.03■■■□□ 2.08
MEIS3-201ENST00000331559 KLHDC4Q8TBB5 520 aa28.03■■■□□ 2.08
MEIS3-201ENST00000331559 TEX13AQ9BXU3 409 aaPredicted RBP28.03■■■□□ 2.08
MEIS3-201ENST00000331559 ZDHHC9Q9Y397 364 aa28.03■■■□□ 2.08
MEIS3-201ENST00000331559 VSIG10Q8N0Z9 540 aa28.01■■■□□ 2.08
MEIS3-201ENST00000331559 CCDC191Q8NCU4 936 aa28.01■■■□□ 2.08
MEIS3-201ENST00000331559 INTS4Q96HW7 963 aaKnown RBP28.01■■■□□ 2.08
MEIS3-201ENST00000331559 LMBRD1Q9NUN5 540 aa28.01■■■□□ 2.08
MEIS3-201ENST00000331559 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.01■■■□□ 2.08
MEIS3-201ENST00000331559 JARID2Q92833 1246 aaPredicted RBP28■■■□□ 2.07
MEIS3-201ENST00000331559 AHDC1Q5TGY3 1603 aaPredicted RBP28■■■□□ 2.07
MEIS3-201ENST00000331559 DISP2A7MBM2 1401 aa28■■■□□ 2.07
MEIS3-201ENST00000331559 TLR7Q9NYK1 1049 aaKnown RBP28■■■□□ 2.07
MEIS3-201ENST00000331559 SNX14Q9Y5W7 946 aa28■■■□□ 2.07
MEIS3-201ENST00000331559 COL22A1Q8NFW1 1626 aaPredicted RBP27.98■■■□□ 2.07
MEIS3-201ENST00000331559 TNNI3KQ59H18 835 aa27.98■■■□□ 2.07
MEIS3-201ENST00000331559 FPGT-TNNI3KV9GXZ4 949 aa27.98■■■□□ 2.07
MEIS3-201ENST00000331559 FOXO4P98177 505 aa27.97■■■□□ 2.07
MEIS3-201ENST00000331559 LMBR1LQ6UX01 489 aa27.97■■■□□ 2.07
MEIS3-201ENST00000331559 UPF3BQ9BZI7 483 aaKnown RBP27.97■■■□□ 2.07
MEIS3-201ENST00000331559 TJP1Q07157 1748 aa27.97■■■□□ 2.07
MEIS3-201ENST00000331559 SNRKQ9NRH2 765 aa27.97■■■□□ 2.07
MEIS3-201ENST00000331559 PLCH1Q4KWH8 1693 aa27.96■■■□□ 2.07
MEIS3-201ENST00000331559 ROBO1Q9Y6N7 1651 aa27.96■■■□□ 2.07
MEIS3-201ENST00000331559 BOLA2Q9H3K6 86 aa27.96■■■□□ 2.07
MEIS3-201ENST00000331559 LRP6O75581 1613 aa27.95■■■□□ 2.07
MEIS3-201ENST00000331559 ATP5JP18859 108 aa27.95■■■□□ 2.07
MEIS3-201ENST00000331559 TFCP2Q12800 502 aa27.95■■■□□ 2.07
MEIS3-201ENST00000331559 ZBTB3Q9H5J0 574 aa27.95■■■□□ 2.07
MEIS3-201ENST00000331559 PIGBQ92521 554 aa27.94■■■□□ 2.06
MEIS3-201ENST00000331559 KCNB2Q92953 911 aa27.94■■■□□ 2.06
MEIS3-201ENST00000331559 FSD1Q9BTV5 496 aa27.94■■■□□ 2.06
MEIS3-201ENST00000331559 CCDC171Q6TFL3 1326 aa27.94■■■□□ 2.06
MEIS3-201ENST00000331559 RFX7Q2KHR2 1363 aa27.94■■■□□ 2.06
MEIS3-201ENST00000331559 NCLP19338 710 aaKnown RBP27.93■■■□□ 2.06
MEIS3-201ENST00000331559 CAVIN1Q6NZI2 390 aaKnown RBP27.93■■■□□ 2.06
MEIS3-201ENST00000331559 DBNLQ9UJU6 430 aaKnown RBP27.93■■■□□ 2.06
MEIS3-201ENST00000331559 PRPF40AO75400 957 aaKnown RBP27.92■■■□□ 2.06
MEIS3-201ENST00000331559 CLCN1P35523 988 aa27.92■■■□□ 2.06
MEIS3-201ENST00000331559 ISCA1Q9BUE6 129 aa27.92■■■□□ 2.06
MEIS3-201ENST00000331559 STARD3NLO95772 234 aa27.92■■■□□ 2.06
MEIS3-201ENST00000331559 NMIQ13287 307 aaPredicted RBP27.92■■■□□ 2.06
MEIS3-201ENST00000331559 CHAMP1Q96JM3 812 aa27.92■■■□□ 2.06
MEIS3-201ENST00000331559 TTC14Q96N46 770 aa27.92■■■□□ 2.06
MEIS3-201ENST00000331559 ZNF445P59923 1031 aa27.91■■■□□ 2.06
MEIS3-201ENST00000331559 RASEFQ8IZ41 740 aa27.91■■■□□ 2.06
MEIS3-201ENST00000331559 TM6SF1Q9BZW5 370 aa27.91■■■□□ 2.06
MEIS3-201ENST00000331559 GPR108Q9NPR9 543 aa27.91■■■□□ 2.06
MEIS3-201ENST00000331559 ATG3Q9NT62 314 aa27.91■■■□□ 2.06
MEIS3-201ENST00000331559 CHMP3Q9Y3E7 222 aa27.91■■■□□ 2.06
MEIS3-201ENST00000331559 COL16A1Q07092 1604 aaPredicted RBP27.91■■■□□ 2.06
MEIS3-201ENST00000331559 PTH1RQ03431 593 aa27.91■■■□□ 2.06
MEIS3-201ENST00000331559 KIF6Q6ZMV9 814 aa27.91■■■□□ 2.06
MEIS3-201ENST00000331559 ASAP1Q9ULH1 1129 aa27.91■■■□□ 2.06
MEIS3-201ENST00000331559 TRIM28Q13263 835 aaKnown RBP27.9■■■□□ 2.06
MEIS3-201ENST00000331559 TCIRG1Q13488 830 aa27.9■■■□□ 2.06
MEIS3-201ENST00000331559 ZSCAN23Q3MJ62 389 aa27.9■■■□□ 2.06
MEIS3-201ENST00000331559 NASPP49321 788 aaPredicted RBP27.89■■■□□ 2.06
MEIS3-201ENST00000331559 IL15P40933 162 aaPredicted RBP27.89■■■□□ 2.05
MEIS3-201ENST00000331559 FOXD4L5Q5VV16 416 aaPredicted RBP27.89■■■□□ 2.05
MEIS3-201ENST00000331559 NOL8Q76FK4 1167 aaKnown RBP27.89■■■□□ 2.05
MEIS3-201ENST00000331559 DNAJC10Q8IXB1 793 aa27.89■■■□□ 2.05
MEIS3-201ENST00000331559 GPT2Q8TD30 523 aa27.89■■■□□ 2.05
MEIS3-201ENST00000331559 FOXD4L4Q8WXT5 416 aaPredicted RBP27.89■■■□□ 2.05
MEIS3-201ENST00000331559 FAM227BQ96M60 508 aa27.89■■■□□ 2.05
MEIS3-201ENST00000331559 ITGB4P16144 1822 aa27.89■■■□□ 2.05
MEIS3-201ENST00000331559 ZKSCAN1P17029 563 aaPredicted RBP27.88■■■□□ 2.05
MEIS3-201ENST00000331559 MED23Q9ULK4 1368 aa27.88■■■□□ 2.05
MEIS3-201ENST00000331559 BCL9O00512 1426 aa27.88■■■□□ 2.05
MEIS3-201ENST00000331559 NECTIN1Q15223 517 aa27.88■■■□□ 2.05
MEIS3-201ENST00000331559 MAP4K1Q92918 833 aa27.88■■■□□ 2.05
MEIS3-201ENST00000331559 PRPF40BQ6NWY9 871 aaKnown RBP27.87■■■□□ 2.05
MEIS3-201ENST00000331559 TRIM44Q96DX7 344 aaPredicted RBP27.87■■■□□ 2.05
MEIS3-201ENST00000331559 ESPNB1AK53 854 aa27.86■■■□□ 2.05
MEIS3-201ENST00000331559 EXOC5O00471 708 aa27.86■■■□□ 2.05
MEIS3-201ENST00000331559 RBM8AQ9Y5S9 174 aaKnown RBP27.86■■■□□ 2.05
MEIS3-201ENST00000331559 CIAO1O76071 339 aa27.86■■■□□ 2.05
MEIS3-201ENST00000331559 ATG9AQ7Z3C6 839 aa27.86■■■□□ 2.05
MEIS3-201ENST00000331559 DBNDD2Q9BQY9 259 aa27.86■■■□□ 2.05
MEIS3-201ENST00000331559 LIMCH1Q9UPQ0 1083 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms