RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 PKDCCQ504Y2 493 aa8.67□□□□□ -1.02
SMG1-201ENST00000330588 NBPF6Q5VWK0 638 aa8.67□□□□□ -1.02
SMG1-201ENST00000330588 CASZ1Q86V15 1759 aa8.67□□□□□ -1.02
SMG1-201ENST00000330588 RDH13Q8NBN7 331 aa8.67□□□□□ -1.02
SMG1-201ENST00000330588 ZCRB1Q8TBF4 217 aaKnown RBP8.67□□□□□ -1.02
SMG1-201ENST00000330588 RAPGEF4Q8WZA2 1011 aa8.67□□□□□ -1.02
SMG1-201ENST00000330588 NBPF4Q96M43 638 aa8.67□□□□□ -1.02
SMG1-201ENST00000330588 SALL2Q9Y467 1007 aaPredicted RBP8.67□□□□□ -1.02
SMG1-201ENST00000330588 EP400Q96L91 3159 aa8.67□□□□□ -1.02
SMG1-201ENST00000330588 DOT1LQ8TEK3 1739 aa8.66□□□□□ -1.02
SMG1-201ENST00000330588 KIF7Q2M1P5 1343 aa8.66□□□□□ -1.02
SMG1-201ENST00000330588 PCDH11XQ9BZA7 1347 aa8.66□□□□□ -1.02
SMG1-201ENST00000330588 PCDH11YQ9BZA8 1340 aa8.66□□□□□ -1.02
SMG1-201ENST00000330588 DDX11L8A8MPP1 907 aa8.66□□□□□ -1.02
SMG1-201ENST00000330588 TATP17735 454 aaPredicted RBP8.66□□□□□ -1.02
SMG1-201ENST00000330588 NLRP7Q8WX94 980 aa8.66□□□□□ -1.02
SMG1-201ENST00000330588 PANK3Q9H999 370 aa8.66□□□□□ -1.02
SMG1-201ENST00000330588 POLKQ9UBT6 870 aa8.66□□□□□ -1.02
SMG1-201ENST00000330588 EMILIN1Q9Y6C2 1016 aa8.66□□□□□ -1.02
SMG1-201ENST00000330588 LY75O60449 1722 aa8.66□□□□□ -1.02
SMG1-201ENST00000330588 ZMYND10O75800 440 aa8.65□□□□□ -1.02
SMG1-201ENST00000330588 HSP90AB2PQ58FF8 381 aa8.65□□□□□ -1.02
SMG1-201ENST00000330588 GPIHBP1Q8IV16 184 aa8.65□□□□□ -1.02
SMG1-201ENST00000330588 SULF1Q8IWU6 871 aa8.65□□□□□ -1.02
SMG1-201ENST00000330588 FAM160A2Q8N612 972 aaPredicted RBP8.65□□□□□ -1.02
SMG1-201ENST00000330588 LTV1Q96GA3 475 aaPredicted RBP8.65□□□□□ -1.02
SMG1-201ENST00000330588 PKD2L1Q9P0L9 805 aa8.65□□□□□ -1.02
SMG1-201ENST00000330588 KNSTRNQ9Y448 316 aa8.65□□□□□ -1.02
SMG1-201ENST00000330588 FBLN1P23142 703 aa8.65□□□□□ -1.03
SMG1-201ENST00000330588 RPIAP49247 311 aa8.65□□□□□ -1.03
SMG1-201ENST00000330588 R3HDM1Q15032 1099 aaKnown RBP8.65□□□□□ -1.03
SMG1-201ENST00000330588 TXNRD1Q16881 649 aa8.65□□□□□ -1.03
SMG1-201ENST00000330588 SLC27A3Q5K4L6 730 aa8.65□□□□□ -1.03
SMG1-201ENST00000330588 SLC27A5Q9Y2P5 690 aa8.65□□□□□ -1.03
SMG1-201ENST00000330588 IGSF1Q8N6C5 1336 aa8.64□□□□□ -1.03
SMG1-201ENST00000330588 TNFRSF10AO00220 468 aa8.64□□□□□ -1.03
SMG1-201ENST00000330588 PER1O15534 1290 aaPredicted RBP8.63□□□□□ -1.03
SMG1-201ENST00000330588 KCNQ2O43526 872 aa8.63□□□□□ -1.03
SMG1-201ENST00000330588 FMNL1O95466 1100 aaPredicted RBP8.63□□□□□ -1.03
SMG1-201ENST00000330588 BRICD5Q6PL45 260 aa8.63□□□□□ -1.03
SMG1-201ENST00000330588 SPG7Q9UQ90 795 aa8.63□□□□□ -1.03
SMG1-201ENST00000330588 COL24A1Q17RW2 1714 aa8.62□□□□□ -1.03
SMG1-201ENST00000330588 PTF1AQ7RTS3 328 aa8.62□□□□□ -1.03
SMG1-201ENST00000330588 DDX54Q8TDD1 881 aaKnown RBP8.62□□□□□ -1.03
SMG1-201ENST00000330588 STK32BQ9NY57 414 aa8.62□□□□□ -1.03
SMG1-201ENST00000330588 ZNF831Q5JPB2 1677 aa8.62□□□□□ -1.03
SMG1-201ENST00000330588 KDRP35968 1356 aa8.62□□□□□ -1.03
SMG1-201ENST00000330588 TOGARAM1Q9Y4F4 1720 aa8.62□□□□□ -1.03
SMG1-201ENST00000330588 FAM187AA6NFU0 413 aa8.61□□□□□ -1.03
SMG1-201ENST00000330588 EIF4A2Q14240 407 aaKnown RBP8.61□□□□□ -1.03
SMG1-201ENST00000330588 SLC15A2Q16348 729 aa8.61□□□□□ -1.03
SMG1-201ENST00000330588 MORC1Q86VD1 984 aa8.61□□□□□ -1.03
SMG1-201ENST00000330588 ZNF775Q96BV0 537 aaPredicted RBP8.61□□□□□ -1.03
SMG1-201ENST00000330588 POLR3GLQ9BT43 218 aa8.61□□□□□ -1.03
SMG1-201ENST00000330588 SLC24A3Q9HC58 644 aa8.61□□□□□ -1.03
SMG1-201ENST00000330588 SPON1Q9HCB6 807 aa8.61□□□□□ -1.03
SMG1-201ENST00000330588 FCF1Q9Y324 198 aaKnown RBP8.61□□□□□ -1.03
SMG1-201ENST00000330588 MSS51Q4VC12 460 aa8.61□□□□□ -1.03
SMG1-201ENST00000330588 ACSBG1Q96GR2 724 aa8.61□□□□□ -1.03
SMG1-201ENST00000330588 ITGB4P16144 1822 aa8.6□□□□□ -1.03
SMG1-201ENST00000330588 PPM1GO15355 546 aaPredicted RBP8.6□□□□□ -1.03
SMG1-201ENST00000330588 CYP27B1O15528 508 aa8.6□□□□□ -1.03
SMG1-201ENST00000330588 USHBP1Q8N6Y0 703 aa8.6□□□□□ -1.03
SMG1-201ENST00000330588 SLC16A10Q8TF71 515 aa8.6□□□□□ -1.03
SMG1-201ENST00000330588 SMARCC1Q92922 1105 aaPredicted RBP8.6□□□□□ -1.03
SMG1-201ENST00000330588 HSP90AB1P08238 724 aaKnown RBP8.59□□□□□ -1.03
SMG1-201ENST00000330588 AMOTQ4VCS5 1084 aa8.59□□□□□ -1.03
SMG1-201ENST00000330588 IFNL2Q8IZJ0 200 aa8.59□□□□□ -1.03
SMG1-201ENST00000330588 CICQ96RK0 1608 aaPredicted RBP8.59□□□□□ -1.03
SMG1-201ENST00000330588 TAF1LQ8IZX4 1826 aa8.59□□□□□ -1.04
SMG1-201ENST00000330588 C5P01031 1676 aa8.58□□□□□ -1.04
SMG1-201ENST00000330588 POTECB2RU33 542 aa8.58□□□□□ -1.04
SMG1-201ENST00000330588 CD46P15529 392 aa8.58□□□□□ -1.04
SMG1-201ENST00000330588 CRIPAKQ8N1N5 446 aa8.58□□□□□ -1.04
SMG1-201ENST00000330588 MTFR1LQ9H019 292 aa8.58□□□□□ -1.04
SMG1-201ENST00000330588 PRDM9Q9NQV7 894 aa8.58□□□□□ -1.04
SMG1-201ENST00000330588 AAASQ9NRG9 546 aa8.58□□□□□ -1.04
SMG1-201ENST00000330588 TOR4AQ9NXH8 423 aa8.58□□□□□ -1.04
SMG1-201ENST00000330588 MAP3K5Q99683 1374 aa8.58□□□□□ -1.04
SMG1-201ENST00000330588 CD2BP2O95400 341 aaKnown RBP8.57□□□□□ -1.04
SMG1-201ENST00000330588 PHKG2P15735 406 aa8.57□□□□□ -1.04
SMG1-201ENST00000330588 IL13P35225 146 aa8.57□□□□□ -1.04
SMG1-201ENST00000330588 MAP2K5Q13163 448 aa8.57□□□□□ -1.04
SMG1-201ENST00000330588 PLEKHO1Q53GL0 409 aaPredicted RBP8.57□□□□□ -1.04
SMG1-201ENST00000330588 RNF19BQ6ZMZ0 732 aa8.57□□□□□ -1.04
SMG1-201ENST00000330588 LRRC4BQ9NT99 713 aa8.57□□□□□ -1.04
SMG1-201ENST00000330588 TUBGCP6Q96RT7 1819 aa8.57□□□□□ -1.04
SMG1-201ENST00000330588 COL3A1P02461 1466 aaPredicted RBP8.57□□□□□ -1.04
SMG1-201ENST00000330588 PALLDQ8WX93 1383 aa8.56□□□□□ -1.04
SMG1-201ENST00000330588 ERVV-2B6SEH9 535 aa8.56□□□□□ -1.04
SMG1-201ENST00000330588 FOXC1Q12948 553 aa8.56□□□□□ -1.04
SMG1-201ENST00000330588 GRIPAP1Q4V328 841 aa8.56□□□□□ -1.04
SMG1-201ENST00000330588 DCAF5Q96JK2 942 aa8.56□□□□□ -1.04
SMG1-201ENST00000330588 ADAMTS7Q9UKP4 1686 aa8.56□□□□□ -1.04
SMG1-201ENST00000330588 AVPP01185 164 aa8.56□□□□□ -1.04
SMG1-201ENST00000330588 TNNT2P45379 298 aaPredicted RBP8.56□□□□□ -1.04
SMG1-201ENST00000330588 FLAD1Q8NFF5 587 aa8.56□□□□□ -1.04
SMG1-201ENST00000330588 SYTL4Q96C24 671 aaPredicted RBP8.56□□□□□ -1.04
SMG1-201ENST00000330588 CCNL1Q9UK58 526 aaPredicted RBP8.56□□□□□ -1.04
SMG1-201ENST00000330588 MRC1P22897 1456 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms