RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 INTS5Q6P9B9 1019 aaKnown RBP24.88■■□□□ 1.57
RIPPLY3-201ENST00000329553 GIGYF2Q6Y7W6 1299 aaKnown RBP24.88■■□□□ 1.57
RIPPLY3-201ENST00000329553 SIL1Q9H173 461 aa24.88■■□□□ 1.57
RIPPLY3-201ENST00000329553 CLASRPQ8N2M8 674 aaKnown RBP24.87■■□□□ 1.57
RIPPLY3-201ENST00000329553 SMARCC1Q92922 1105 aaPredicted RBP24.87■■□□□ 1.57
RIPPLY3-201ENST00000329553 LMBR1LQ6UX01 489 aa24.86■■□□□ 1.57
RIPPLY3-201ENST00000329553 AOX1Q06278 1338 aa24.86■■□□□ 1.57
RIPPLY3-201ENST00000329553 BECN1Q14457 450 aa24.86■■□□□ 1.57
RIPPLY3-201ENST00000329553 COPRSQ9NQ92 184 aa24.86■■□□□ 1.57
RIPPLY3-201ENST00000329553 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.86■■□□□ 1.57
RIPPLY3-201ENST00000329553 PTPN12Q05209 780 aaKnown RBP24.85■■□□□ 1.57
RIPPLY3-201ENST00000329553 CCDC87Q9NVE4 849 aa24.85■■□□□ 1.57
RIPPLY3-201ENST00000329553 CRKLP46109 303 aaKnown RBP24.85■■□□□ 1.57
RIPPLY3-201ENST00000329553 TBC1D2BQ9UPU7 963 aa24.85■■□□□ 1.57
RIPPLY3-201ENST00000329553 THSD7AQ9UPZ6 1657 aa24.85■■□□□ 1.57
RIPPLY3-201ENST00000329553 TUBGCP6Q96RT7 1819 aa24.85■■□□□ 1.57
RIPPLY3-201ENST00000329553 EIF5P55010 431 aaKnown RBP24.84■■□□□ 1.57
RIPPLY3-201ENST00000329553 PTF1AQ7RTS3 328 aa24.84■■□□□ 1.57
RIPPLY3-201ENST00000329553 DZIP3Q86Y13 1208 aaKnown RBP24.84■■□□□ 1.57
RIPPLY3-201ENST00000329553 PI4K2BQ8TCG2 481 aa24.84■■□□□ 1.57
RIPPLY3-201ENST00000329553 FRAT2O75474 233 aaPredicted RBP24.83■■□□□ 1.57
RIPPLY3-201ENST00000329553 RBM25P49756 843 aaKnown RBP24.82■■□□□ 1.56
RIPPLY3-201ENST00000329553 FAM182BQ5T319 152 aa24.82■■□□□ 1.56
RIPPLY3-201ENST00000329553 TRIM6-TRIM34B2RNG4 842 aa24.81■■□□□ 1.56
RIPPLY3-201ENST00000329553 ERVV-1B6SEH8 477 aa24.81■■□□□ 1.56
RIPPLY3-201ENST00000329553 GPTP24298 496 aa24.81■■□□□ 1.56
RIPPLY3-201ENST00000329553 HSP90AB3PQ58FF7 597 aa24.81■■□□□ 1.56
RIPPLY3-201ENST00000329553 CHMP3Q9Y3E7 222 aa24.81■■□□□ 1.56
RIPPLY3-201ENST00000329553 USP42Q9H9J4 1324 aaKnown RBP24.81■■□□□ 1.56
RIPPLY3-201ENST00000329553 CASC1Q6TDU7 716 aa24.81■■□□□ 1.56
RIPPLY3-201ENST00000329553 AACSQ86V21 672 aa24.81■■□□□ 1.56
RIPPLY3-201ENST00000329553 RILPL2Q969X0 211 aa24.81■■□□□ 1.56
RIPPLY3-201ENST00000329553 PCCAP05165 728 aaPredicted RBP24.8■■□□□ 1.56
RIPPLY3-201ENST00000329553 IFIT2P09913 472 aaKnown RBP24.8■■□□□ 1.56
RIPPLY3-201ENST00000329553 NLRP10Q86W26 655 aa24.8■■□□□ 1.56
RIPPLY3-201ENST00000329553 EAF2Q96CJ1 260 aaPredicted RBP24.8■■□□□ 1.56
RIPPLY3-201ENST00000329553 FAM89AQ96GI7 184 aa24.8■■□□□ 1.56
RIPPLY3-201ENST00000329553 TRPC5Q9UL62 973 aaPredicted RBP24.8■■□□□ 1.56
RIPPLY3-201ENST00000329553 MYH14Q7Z406 1995 aaKnown RBP24.8■■□□□ 1.56
RIPPLY3-201ENST00000329553 ZBTB38Q8NAP3 1195 aaPredicted RBP24.8■■□□□ 1.56
RIPPLY3-201ENST00000329553 ATRNO75882 1429 aa24.79■■□□□ 1.56
RIPPLY3-201ENST00000329553 ONECUT3O60422 494 aaPredicted RBP24.79■■□□□ 1.56
RIPPLY3-201ENST00000329553 CICQ96RK0 1608 aaPredicted RBP24.79■■□□□ 1.56
RIPPLY3-201ENST00000329553 TTC41PQ6P2S7 1318 aa24.79■■□□□ 1.56
RIPPLY3-201ENST00000329553 NUP98P52948 1817 aa24.79■■□□□ 1.56
RIPPLY3-201ENST00000329553 EIF5BO60841 1220 aaKnown RBP24.78■■□□□ 1.56
RIPPLY3-201ENST00000329553 CCDC8Q9H0W5 538 aaPredicted RBP24.77■■□□□ 1.56
RIPPLY3-201ENST00000329553 ECHDC1Q9NTX5 307 aa24.77■■□□□ 1.56
RIPPLY3-201ENST00000329553 MAP4K4O95819 1239 aaPredicted RBP24.77■■□□□ 1.56
RIPPLY3-201ENST00000329553 SYNE4Q8N205 404 aa24.77■■□□□ 1.56
RIPPLY3-201ENST00000329553 RREB1Q92766 1687 aa24.76■■□□□ 1.55
RIPPLY3-201ENST00000329553 KCNQ4P56696 695 aa24.76■■□□□ 1.55
RIPPLY3-201ENST00000329553 GLRX3O76003 335 aaKnown RBP24.76■■□□□ 1.55
RIPPLY3-201ENST00000329553 ZNF34Q8IZ26 560 aa24.75■■□□□ 1.55
RIPPLY3-201ENST00000329553 PLA2G12BQ9BX93 195 aa24.75■■□□□ 1.55
RIPPLY3-201ENST00000329553 ANKRD36CQ5JPF3 1778 aa24.75■■□□□ 1.55
RIPPLY3-201ENST00000329553 CHMLP26374 656 aa24.74■■□□□ 1.55
RIPPLY3-201ENST00000329553 TFCP2Q12800 502 aa24.74■■□□□ 1.55
RIPPLY3-201ENST00000329553 SEPT12Q8IYM1 358 aa24.74■■□□□ 1.55
RIPPLY3-201ENST00000329553 LINC00116Q8NCU8 138 aa24.74■■□□□ 1.55
RIPPLY3-201ENST00000329553 USP26Q9BXU7 913 aa24.74■■□□□ 1.55
RIPPLY3-201ENST00000329553 ANTXR1Q9H6X2 564 aa24.74■■□□□ 1.55
RIPPLY3-201ENST00000329553 QTRT2Q9H974 415 aaKnown RBP24.74■■□□□ 1.55
RIPPLY3-201ENST00000329553 ERC2O15083 957 aa24.74■■□□□ 1.55
RIPPLY3-201ENST00000329553 GPATCH3Q96I76 525 aa24.74■■□□□ 1.55
RIPPLY3-201ENST00000329553 TLR7Q9NYK1 1049 aaKnown RBP24.74■■□□□ 1.55
RIPPLY3-201ENST00000329553 UBN2Q6ZU65 1347 aa24.73■■□□□ 1.55
RIPPLY3-201ENST00000329553 ZNF831Q5JPB2 1677 aa24.73■■□□□ 1.55
RIPPLY3-201ENST00000329553 COL5A3P25940 1745 aaPredicted RBP24.73■■□□□ 1.55
RIPPLY3-201ENST00000329553 CAMTA2O94983 1202 aa24.73■■□□□ 1.55
RIPPLY3-201ENST00000329553 KIF2CQ99661 725 aa24.73■■□□□ 1.55
RIPPLY3-201ENST00000329553 TBC1D2Q9BYX2 928 aa24.73■■□□□ 1.55
RIPPLY3-201ENST00000329553 CDHR2Q9BYE9 1310 aa24.73■■□□□ 1.55
RIPPLY3-201ENST00000329553 ATG9AQ7Z3C6 839 aa24.72■■□□□ 1.55
RIPPLY3-201ENST00000329553 ZNF594Q96JF6 807 aaPredicted RBP24.72■■□□□ 1.55
RIPPLY3-201ENST00000329553 TRMT112Q9UI30 125 aaKnown RBP24.72■■□□□ 1.55
RIPPLY3-201ENST00000329553 BTAF1O14981 1849 aa24.72■■□□□ 1.55
RIPPLY3-201ENST00000329553 CSF1RP07333 972 aa24.71■■□□□ 1.55
RIPPLY3-201ENST00000329553 TNNI3KQ59H18 835 aa24.71■■□□□ 1.55
RIPPLY3-201ENST00000329553 ESYT1Q9BSJ8 1104 aa24.71■■□□□ 1.55
RIPPLY3-201ENST00000329553 FPGT-TNNI3KV9GXZ4 949 aa24.71■■□□□ 1.55
RIPPLY3-201ENST00000329553 NHSQ6T4R5 1651 aa24.71■■□□□ 1.55
RIPPLY3-201ENST00000329553 CNTROBQ8N137 903 aa24.7■■□□□ 1.55
RIPPLY3-201ENST00000329553 REC8O95072 547 aa24.7■■□□□ 1.54
RIPPLY3-201ENST00000329553 CCDC85AQ96PX6 553 aaPredicted RBP24.7■■□□□ 1.54
RIPPLY3-201ENST00000329553 CCDC57Q2TAC2 916 aa24.69■■□□□ 1.54
RIPPLY3-201ENST00000329553 LRRC24Q50LG9 513 aa24.69■■□□□ 1.54
RIPPLY3-201ENST00000329553 AK9Q5TCS8 1911 aa24.69■■□□□ 1.54
RIPPLY3-201ENST00000329553 EYA2O00167 538 aa24.69■■□□□ 1.54
RIPPLY3-201ENST00000329553 IRS4O14654 1257 aaPredicted RBP24.69■■□□□ 1.54
RIPPLY3-201ENST00000329553 IL27Q8NEV9 243 aa24.68■■□□□ 1.54
RIPPLY3-201ENST00000329553 SLKQ9H2G2 1235 aaPredicted RBP24.68■■□□□ 1.54
RIPPLY3-201ENST00000329553 IL15P40933 162 aaPredicted RBP24.67■■□□□ 1.54
RIPPLY3-201ENST00000329553 SUSD4Q5VX71 490 aa24.67■■□□□ 1.54
RIPPLY3-201ENST00000329553 PUS3Q9BZE2 481 aaKnown RBP24.67■■□□□ 1.54
RIPPLY3-201ENST00000329553 DBNLQ9UJU6 430 aaKnown RBP24.67■■□□□ 1.54
RIPPLY3-201ENST00000329553 TTLL11Q8NHH1 800 aa24.67■■□□□ 1.54
RIPPLY3-201ENST00000329553 CNTNAP4Q9C0A0 1308 aa24.66■■□□□ 1.54
RIPPLY3-201ENST00000329553 CIAO1O76071 339 aa24.66■■□□□ 1.54
RIPPLY3-201ENST00000329553 SBF2Q86WG5 1849 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms