RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 C3orf67Q6ZVT6 689 aa20.89■□□□□ 0.94
PDLIM1-201ENST00000329399 PLBD2Q8NHP8 589 aa20.89■□□□□ 0.94
PDLIM1-201ENST00000329399 ST5P78524 1137 aa20.88■□□□□ 0.93
PDLIM1-201ENST00000329399 KLRG2A4D1S0 409 aaPredicted RBP20.88■□□□□ 0.93
PDLIM1-201ENST00000329399 ATP5J2-PTCD1G3V325 749 aa20.88■□□□□ 0.93
PDLIM1-201ENST00000329399 IPO8O15397 1037 aaKnown RBP20.88■□□□□ 0.93
PDLIM1-201ENST00000329399 BCAR3O75815 825 aa20.88■□□□□ 0.93
PDLIM1-201ENST00000329399 SRGNP10124 158 aa20.88■□□□□ 0.93
PDLIM1-201ENST00000329399 PDE6BP35913 854 aa20.88■□□□□ 0.93
PDLIM1-201ENST00000329399 NLRP10Q86W26 655 aa20.88■□□□□ 0.93
PDLIM1-201ENST00000329399 ZNF622Q969S3 477 aaKnown RBP eCLIP20.88■□□□□ 0.93
PDLIM1-201ENST00000329399 CHMP4AQ9BY43 222 aa20.88■□□□□ 0.93
PDLIM1-201ENST00000329399 KIF16BQ96L93 1317 aa20.86■□□□□ 0.93
PDLIM1-201ENST00000329399 COL11A2P13942 1736 aaPredicted RBP20.86■□□□□ 0.93
PDLIM1-201ENST00000329399 SLC4A2P04920 1241 aa20.86■□□□□ 0.93
PDLIM1-201ENST00000329399 ARHGAP27Q6ZUM4 889 aa20.86■□□□□ 0.93
PDLIM1-201ENST00000329399 PLIN1O60240 522 aa20.85■□□□□ 0.93
PDLIM1-201ENST00000329399 TTLL6Q8N841 843 aa20.85■□□□□ 0.93
PDLIM1-201ENST00000329399 CCDC136Q96JN2 1154 aa20.85■□□□□ 0.93
PDLIM1-201ENST00000329399 ISCA1Q9BUE6 129 aa20.85■□□□□ 0.93
PDLIM1-201ENST00000329399 ZNF219Q9P2Y4 722 aaPredicted RBP20.85■□□□□ 0.93
PDLIM1-201ENST00000329399 GTF2E1P29083 439 aaPredicted RBP20.84■□□□□ 0.93
PDLIM1-201ENST00000329399 SLC51AQ86UW1 340 aa20.84■□□□□ 0.93
PDLIM1-201ENST00000329399 PARP10Q53GL7 1025 aa20.83■□□□□ 0.93
PDLIM1-201ENST00000329399 ZKSCAN2Q63HK3 967 aa20.83■□□□□ 0.93
PDLIM1-201ENST00000329399 RIC3Q7Z5B4 369 aa20.83■□□□□ 0.93
PDLIM1-201ENST00000329399 EXOC6Q8TAG9 804 aa20.83■□□□□ 0.93
PDLIM1-201ENST00000329399 UTP14AQ9BVJ6 771 aaKnown RBP20.83■□□□□ 0.93
PDLIM1-201ENST00000329399 NYXQ9GZU5 481 aa20.83■□□□□ 0.93
PDLIM1-201ENST00000329399 SMC4Q9NTJ3 1288 aa20.83■□□□□ 0.93
PDLIM1-201ENST00000329399 CHD4Q14839 1912 aa20.83■□□□□ 0.92
PDLIM1-201ENST00000329399 PRELPP51888 382 aa20.82■□□□□ 0.92
PDLIM1-201ENST00000329399 ARHGAP45Q92619 1136 aa20.82■□□□□ 0.92
PDLIM1-201ENST00000329399 TNRC6CQ9HCJ0 1690 aaKnown RBP20.82■□□□□ 0.92
PDLIM1-201ENST00000329399 PI4KAP2A4QPH2 592 aa20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 HCLS1P14317 486 aaPredicted RBP20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 HSP90AB3PQ58FF7 597 aa20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 OLFM4Q6UX06 510 aa20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 PPP1R42Q7Z4L9 355 aa20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 PI4KAP1Q8N8J0 262 aa20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 MASTLQ96GX5 879 aa20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 ADCY9O60503 1353 aa20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 DLEC1Q9Y238 1755 aa20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 C21orf2O43822 256 aa20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 CRY2Q49AN0 593 aa20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 SLC10A5Q5PT55 438 aa20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 STYK1Q6J9G0 422 aa20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 JARID2Q92833 1246 aaPredicted RBP20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 CRBNQ96SW2 442 aa20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 MYD88Q99836 296 aa20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 STK31Q9BXU1 1019 aa20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 TRMT112Q9UI30 125 aaKnown RBP20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 MAP3K2Q9Y2U5 619 aa20.81■□□□□ 0.92
PDLIM1-201ENST00000329399 SLX4Q8IY92 1834 aa20.8■□□□□ 0.92
PDLIM1-201ENST00000329399 IBTKQ9P2D0 1353 aaPredicted RBP20.8■□□□□ 0.92
PDLIM1-201ENST00000329399 RTL5Q5HYW3 569 aaPredicted RBP20.8■□□□□ 0.92
PDLIM1-201ENST00000329399 C7orf43Q8WVR3 580 aa20.8■□□□□ 0.92
PDLIM1-201ENST00000329399 SSH1Q8WYL5 1049 aa20.8■□□□□ 0.92
PDLIM1-201ENST00000329399 FAM89AQ96GI7 184 aa20.8■□□□□ 0.92
PDLIM1-201ENST00000329399 NPR1P16066 1061 aa20.79■□□□□ 0.92
PDLIM1-201ENST00000329399 RASSF7Q02833 373 aa20.79■□□□□ 0.92
PDLIM1-201ENST00000329399 TRIM28Q13263 835 aaKnown RBP20.79■□□□□ 0.92
PDLIM1-201ENST00000329399 PRPF40BQ6NWY9 871 aaKnown RBP20.79■□□□□ 0.92
PDLIM1-201ENST00000329399 ZNF784Q8NCA9 323 aaPredicted RBP20.79■□□□□ 0.92
PDLIM1-201ENST00000329399 CHMP4BQ9H444 224 aaKnown RBP20.79■□□□□ 0.92
PDLIM1-201ENST00000329399 PDZRN3Q9UPQ7 1066 aa20.79■□□□□ 0.92
PDLIM1-201ENST00000329399 ARFGEF1Q9Y6D6 1849 aa20.79■□□□□ 0.92
PDLIM1-201ENST00000329399 IGKV5-2P06315 115 aa20.78■□□□□ 0.92
PDLIM1-201ENST00000329399 FLIIQ13045 1269 aa20.78■□□□□ 0.92
PDLIM1-201ENST00000329399 KSR2Q6VAB6 950 aa20.78■□□□□ 0.92
PDLIM1-201ENST00000329399 METTL22Q9BUU2 404 aaPredicted RBP20.78■□□□□ 0.92
PDLIM1-201ENST00000329399 ANKRD36CQ5JPF3 1778 aa20.78■□□□□ 0.92
PDLIM1-201ENST00000329399 ARFGEF2Q9Y6D5 1785 aa20.78■□□□□ 0.92
PDLIM1-201ENST00000329399 FRAT1Q92837 279 aaPredicted RBP20.77■□□□□ 0.92
PDLIM1-201ENST00000329399 NFKBIEO00221 500 aa20.76■□□□□ 0.91
PDLIM1-201ENST00000329399 ATF7IPQ6VMQ6 1270 aa20.76■□□□□ 0.91
PDLIM1-201ENST00000329399 CNKSR1Q969H4 720 aa20.76■□□□□ 0.91
PDLIM1-201ENST00000329399 C20orf194Q5TEA3 1177 aa20.75■□□□□ 0.91
PDLIM1-201ENST00000329399 DZIP1LQ8IYY4 767 aaKnown RBP20.75■□□□□ 0.91
PDLIM1-201ENST00000329399 SH3TC1Q8TE82 1336 aa20.75■□□□□ 0.91
PDLIM1-201ENST00000329399 F6X3S4 739 aa20.75■□□□□ 0.91
PDLIM1-201ENST00000329399 HOXA10P31260 410 aaPredicted RBP20.75■□□□□ 0.91
PDLIM1-201ENST00000329399 CWF19L2Q2TBE0 894 aaKnown RBP20.75■□□□□ 0.91
PDLIM1-201ENST00000329399 B4GALNT3Q6L9W6 998 aa20.75■□□□□ 0.91
PDLIM1-201ENST00000329399 FTSJ3Q8IY81 847 aaKnown RBP20.75■□□□□ 0.91
PDLIM1-201ENST00000329399 DDX58O95786 925 aaKnown RBP20.74■□□□□ 0.91
PDLIM1-201ENST00000329399 C9orf131Q5VYM1 1079 aa20.74■□□□□ 0.91
PDLIM1-201ENST00000329399 MRPL50Q8N5N7 158 aaKnown RBP20.74■□□□□ 0.91
PDLIM1-201ENST00000329399 NLRP3Q96P20 1036 aa20.74■□□□□ 0.91
PDLIM1-201ENST00000329399 FKBP5Q13451 457 aaPredicted RBP20.73■□□□□ 0.91
PDLIM1-201ENST00000329399 RIC1Q4ADV7 1423 aa20.73■□□□□ 0.91
PDLIM1-201ENST00000329399 CACNA1SQ13698 1873 aa20.72■□□□□ 0.91
PDLIM1-201ENST00000329399 CCDC191Q8NCU4 936 aa20.72■□□□□ 0.91
PDLIM1-201ENST00000329399 API5Q9BZZ5 524 aaKnown RBP20.72■□□□□ 0.91
PDLIM1-201ENST00000329399 IRS4O14654 1257 aaPredicted RBP20.71■□□□□ 0.91
PDLIM1-201ENST00000329399 ZBTB38Q8NAP3 1195 aaPredicted RBP20.71■□□□□ 0.91
PDLIM1-201ENST00000329399 RPGRQ92834 1020 aaKnown RBP20.71■□□□□ 0.91
PDLIM1-201ENST00000329399 BCL2L13Q9BXK5 485 aa20.71■□□□□ 0.91
PDLIM1-201ENST00000329399 NOB1Q9ULX3 412 aaKnown RBP20.71■□□□□ 0.91
PDLIM1-201ENST00000329399 DDX19BQ9UMR2 479 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms