RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 TMPOP42166 694 aaKnown RBP18.83■□□□□ 0.61
SMAD3-201ENST00000327367 KCNK9Q9NPC2 374 aa18.83■□□□□ 0.61
SMAD3-201ENST00000327367 HAND2P61296 217 aa18.83■□□□□ 0.61
SMAD3-201ENST00000327367 ARID5AQ03989 594 aa18.83■□□□□ 0.61
SMAD3-201ENST00000327367 CFAP58Q5T655 872 aa18.83■□□□□ 0.61
SMAD3-201ENST00000327367 FAM76AQ8TAV0 307 aa18.83■□□□□ 0.61
SMAD3-201ENST00000327367 GUCA1BQ9UMX6 200 aa18.83■□□□□ 0.61
SMAD3-201ENST00000327367 ZNF530Q6P9A1 599 aaPredicted RBP18.83■□□□□ 0.6
SMAD3-201ENST00000327367 PPP1R12CQ9BZL4 782 aa18.83■□□□□ 0.6
SMAD3-201ENST00000327367 STRN4Q9NRL3 753 aa18.83■□□□□ 0.6
SMAD3-201ENST00000327367 FAM114A2Q9NRY5 505 aa18.83■□□□□ 0.6
SMAD3-201ENST00000327367 DACT1Q9NYF0 836 aa18.83■□□□□ 0.6
SMAD3-201ENST00000327367 CCDC63Q8NA47 563 aa18.82■□□□□ 0.6
SMAD3-201ENST00000327367 GJC1P36383 396 aa18.82■□□□□ 0.6
SMAD3-201ENST00000327367 LRRC2Q9BYS8 371 aa18.82■□□□□ 0.6
SMAD3-201ENST00000327367 CABP1Q9NZU7 370 aa18.82■□□□□ 0.6
SMAD3-201ENST00000327367 CERS3Q8IU89 383 aa18.82■□□□□ 0.6
SMAD3-201ENST00000327367 LMOD1P29536 600 aaPredicted RBP18.82■□□□□ 0.6
SMAD3-201ENST00000327367 DNM1Q05193 864 aaKnown RBP18.82■□□□□ 0.6
SMAD3-201ENST00000327367 USP16Q9Y5T5 823 aa18.82■□□□□ 0.6
SMAD3-201ENST00000327367 BUB1BO60566 1050 aaPredicted RBP18.82■□□□□ 0.6
SMAD3-201ENST00000327367 HPDP32754 393 aaPredicted RBP18.82■□□□□ 0.6
SMAD3-201ENST00000327367 CCDC102BQ68D86 513 aa18.82■□□□□ 0.6
SMAD3-201ENST00000327367 EHBP1Q8NDI1 1231 aa18.82■□□□□ 0.6
SMAD3-201ENST00000327367 TCEANC2Q96MN5 208 aa18.82■□□□□ 0.6
SMAD3-201ENST00000327367 IFIT3O14879 490 aaKnown RBP18.81■□□□□ 0.6
SMAD3-201ENST00000327367 FAM200AQ8TCP9 573 aa18.81■□□□□ 0.6
SMAD3-201ENST00000327367 IQCGQ9H095 443 aaKnown RBP18.81■□□□□ 0.6
SMAD3-201ENST00000327367 ZNF213O14771 459 aa18.81■□□□□ 0.6
SMAD3-201ENST00000327367 IFIT1P09914 478 aaKnown RBP18.81■□□□□ 0.6
SMAD3-201ENST00000327367 SYKP43405 635 aa18.81■□□□□ 0.6
SMAD3-201ENST00000327367 NAPBQ9H115 298 aa18.81■□□□□ 0.6
SMAD3-201ENST00000327367 SEC62Q99442 399 aaKnown RBP18.81■□□□□ 0.6
SMAD3-201ENST00000327367 GPRASP1Q5JY77 1395 aa18.81■□□□□ 0.6
SMAD3-201ENST00000327367 METTL24Q5JXM2 366 aa18.81■□□□□ 0.6
SMAD3-201ENST00000327367 ANKRD30BQ9BXX2 1392 aa18.81■□□□□ 0.6
SMAD3-201ENST00000327367 SMC6Q96SB8 1091 aa18.81■□□□□ 0.6
SMAD3-201ENST00000327367 PCK1P35558 622 aa18.8■□□□□ 0.6
SMAD3-201ENST00000327367 PHAXQ9H814 394 aaKnown RBP18.8■□□□□ 0.6
SMAD3-201ENST00000327367 SCAPERQ9BY12 1400 aa18.8■□□□□ 0.6
SMAD3-201ENST00000327367 PDE1CQ14123 709 aaPredicted RBP18.8■□□□□ 0.6
SMAD3-201ENST00000327367 BICDL1Q6ZP65 573 aa18.8■□□□□ 0.6
SMAD3-201ENST00000327367 FERMT2Q96AC1 680 aa18.8■□□□□ 0.6
SMAD3-201ENST00000327367 CCDC194A0A1B0GVG4 234 aa18.8■□□□□ 0.6
SMAD3-201ENST00000327367 RIOK3O14730 519 aaKnown RBP18.8■□□□□ 0.6
SMAD3-201ENST00000327367 MARCKSP29966 332 aaPredicted RBP18.8■□□□□ 0.6
SMAD3-201ENST00000327367 DUSP27Q5VZP5 1158 aa18.8■□□□□ 0.6
SMAD3-201ENST00000327367 CCDC25Q86WR0 208 aa18.8■□□□□ 0.6
SMAD3-201ENST00000327367 NOL3O60936 208 aaKnown RBP18.79■□□□□ 0.6
SMAD3-201ENST00000327367 SEPT14Q6ZU15 432 aa18.79■□□□□ 0.6
SMAD3-201ENST00000327367 SLC26A6Q9BXS9 759 aa18.79■□□□□ 0.6
SMAD3-201ENST00000327367 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.79■□□□□ 0.6
SMAD3-201ENST00000327367 MICU3Q86XE3 530 aa18.79■□□□□ 0.6
SMAD3-201ENST00000327367 TSNARE1Q96NA8 513 aa18.79■□□□□ 0.6
SMAD3-201ENST00000327367 CDK19Q9BWU1 502 aa18.79■□□□□ 0.6
SMAD3-201ENST00000327367 TMEM266Q2M3C6 531 aa18.79■□□□□ 0.6
SMAD3-201ENST00000327367 UBLCP1Q8WVY7 318 aaPredicted RBP18.79■□□□□ 0.6
SMAD3-201ENST00000327367 MKNK2Q9HBH9 465 aa18.79■□□□□ 0.6
SMAD3-201ENST00000327367 ORC3Q9UBD5 711 aaPredicted RBP18.79■□□□□ 0.6
SMAD3-201ENST00000327367 TPD52P55327 224 aaPredicted RBP18.79■□□□□ 0.6
SMAD3-201ENST00000327367 GRIPAP1Q4V328 841 aa18.79■□□□□ 0.6
SMAD3-201ENST00000327367 CWC25Q9NXE8 425 aaPredicted RBP18.79■□□□□ 0.6
SMAD3-201ENST00000327367 NKTRP30414 1462 aaKnown RBP18.78■□□□□ 0.6
SMAD3-201ENST00000327367 A0A1B0GUA9 196 aa18.78■□□□□ 0.6
SMAD3-201ENST00000327367 DDX46Q7L014 1031 aaKnown RBP18.78■□□□□ 0.6
SMAD3-201ENST00000327367 ARL1P40616 181 aaPredicted RBP18.78■□□□□ 0.6
SMAD3-201ENST00000327367 EVCP57679 992 aa18.78■□□□□ 0.6
SMAD3-201ENST00000327367 PIP4K2BP78356 416 aa18.78■□□□□ 0.6
SMAD3-201ENST00000327367 TYRO3Q06418 890 aa18.78■□□□□ 0.6
SMAD3-201ENST00000327367 HDXQ7Z353 690 aa18.78■□□□□ 0.6
SMAD3-201ENST00000327367 SAMD15Q9P1V8 674 aa18.78■□□□□ 0.6
SMAD3-201ENST00000327367 ERBINQ96RT1 1412 aa18.78■□□□□ 0.6
SMAD3-201ENST00000327367 CYLC1P35663 651 aaPredicted RBP18.78■□□□□ 0.6
SMAD3-201ENST00000327367 FEZ1Q99689 392 aa18.78■□□□□ 0.6
SMAD3-201ENST00000327367 VAT1LQ9HCJ6 419 aa18.78■□□□□ 0.6
SMAD3-201ENST00000327367 PPM1FP49593 454 aaPredicted RBP18.78■□□□□ 0.6
SMAD3-201ENST00000327367 FAM114A1Q8IWE2 563 aa18.78■□□□□ 0.6
SMAD3-201ENST00000327367 CTCFLQ8NI51 663 aaPredicted RBP18.78■□□□□ 0.6
SMAD3-201ENST00000327367 AFAP1L1Q8TED9 768 aa18.78■□□□□ 0.6
SMAD3-201ENST00000327367 ESCO1Q5FWF5 840 aa18.77■□□□□ 0.6
SMAD3-201ENST00000327367 RPUSD2Q8IZ73 545 aaKnown RBP18.77■□□□□ 0.6
SMAD3-201ENST00000327367 UTP14AQ9BVJ6 771 aaKnown RBP18.77■□□□□ 0.6
SMAD3-201ENST00000327367 PPP1R9BQ96SB3 815 aa18.77■□□□□ 0.6
SMAD3-201ENST00000327367 FEZ2Q9UHY8 353 aaPredicted RBP18.77■□□□□ 0.6
SMAD3-201ENST00000327367 LACTBP83111 547 aaPredicted RBP18.77■□□□□ 0.6
SMAD3-201ENST00000327367 PPP2R3AQ06190 1150 aa18.77■□□□□ 0.6
SMAD3-201ENST00000327367 IFNKQ9P0W0 207 aa18.77■□□□□ 0.6
SMAD3-201ENST00000327367 VIMP08670 466 aaKnown RBP18.77■□□□□ 0.59
SMAD3-201ENST00000327367 MYD88Q99836 296 aa18.77■□□□□ 0.59
SMAD3-201ENST00000327367 HMGB1P09429 215 aaKnown RBP18.77■□□□□ 0.59
SMAD3-201ENST00000327367 TRIM27P14373 513 aa18.77■□□□□ 0.59
SMAD3-201ENST00000327367 ELF2Q15723 593 aa18.77■□□□□ 0.59
SMAD3-201ENST00000327367 TSC1Q92574 1164 aa18.77■□□□□ 0.59
SMAD3-201ENST00000327367 GSTA5Q7RTV2 222 aa18.76■□□□□ 0.59
SMAD3-201ENST00000327367 SELENOOQ9BVL4 669 aa18.76■□□□□ 0.59
SMAD3-201ENST00000327367 ERCC3P19447 782 aa18.76■□□□□ 0.59
SMAD3-201ENST00000327367 CALML4Q96GE6 196 aa18.76■□□□□ 0.59
SMAD3-201ENST00000327367 TATP17735 454 aaPredicted RBP18.76■□□□□ 0.59
SMAD3-201ENST00000327367 STX17P56962 302 aa18.76■□□□□ 0.59
SMAD3-201ENST00000327367 JPH4Q96JJ6 628 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms