RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 ITPK1Q13572 414 aa11.12□□□□□ -0.63
CD46-202ENST00000322918 TRMT112Q9UI30 125 aaKnown RBP11.12□□□□□ -0.63
CD46-202ENST00000322918 KCPQ6ZWJ8 1503 aa11.12□□□□□ -0.63
CD46-202ENST00000322918 CHGBP05060 677 aa11.11□□□□□ -0.63
CD46-202ENST00000322918 CRKLP46109 303 aaKnown RBP11.11□□□□□ -0.63
CD46-202ENST00000322918 TCIRG1Q13488 830 aa11.11□□□□□ -0.63
CD46-202ENST00000322918 PI4K2BQ8TCG2 481 aa11.11□□□□□ -0.63
CD46-202ENST00000322918 COL14A1Q05707 1796 aaKnown RBP11.11□□□□□ -0.63
CD46-202ENST00000322918 DISP2A7MBM2 1401 aa11.11□□□□□ -0.63
CD46-202ENST00000322918 ADAMTS7Q9UKP4 1686 aa11.11□□□□□ -0.63
CD46-202ENST00000322918 SALL3Q9BXA9 1300 aa11.11□□□□□ -0.63
CD46-202ENST00000322918 ERC2O15083 957 aa11.11□□□□□ -0.63
CD46-202ENST00000322918 MTX1Q13505 466 aa11.11□□□□□ -0.63
CD46-202ENST00000322918 CCDC24Q8N4L8 307 aa11.11□□□□□ -0.63
CD46-202ENST00000322918 HCLS1P14317 486 aaPredicted RBP11.11□□□□□ -0.63
CD46-202ENST00000322918 CHMLP26374 656 aa11.11□□□□□ -0.63
CD46-202ENST00000322918 TEX13AQ9BXU3 409 aaPredicted RBP11.11□□□□□ -0.63
CD46-202ENST00000322918 USP26Q9BXU7 913 aa11.11□□□□□ -0.63
CD46-202ENST00000322918 DTNBO60941 627 aa11.1□□□□□ -0.63
CD46-202ENST00000322918 FOXO4P98177 505 aa11.1□□□□□ -0.63
CD46-202ENST00000322918 DBNDD2Q9BQY9 259 aa11.1□□□□□ -0.63
CD46-202ENST00000322918 ECHDC1Q9NTX5 307 aa11.1□□□□□ -0.63
CD46-202ENST00000322918 TOGARAM1Q9Y4F4 1720 aa11.1□□□□□ -0.63
CD46-202ENST00000322918 JCADQ9P266 1359 aa11.1□□□□□ -0.63
CD46-202ENST00000322918 CCDC191Q8NCU4 936 aa11.1□□□□□ -0.63
CD46-202ENST00000322918 KIF2CQ99661 725 aa11.1□□□□□ -0.63
CD46-202ENST00000322918 LARP6Q9BRS8 491 aaKnown RBP11.1□□□□□ -0.63
CD46-202ENST00000322918 OSBPL3Q9H4L5 887 aa11.1□□□□□ -0.63
CD46-202ENST00000322918 H7C1W4 665 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 CCDC57Q2TAC2 916 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 ERC1Q8IUD2 1116 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 GPATCH3Q96I76 525 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 ESYT1Q9BSJ8 1104 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 UPF3BQ9BZI7 483 aaKnown RBP11.09□□□□□ -0.63
CD46-202ENST00000322918 DIAPH3Q9NSV4 1193 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 UTYO14607 1347 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 TNS2Q63HR2 1409 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 PHF14O94880 888 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 REC8O95072 547 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 CASP7P55210 303 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 SLFNL1Q499Z3 407 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 CNTROBQ8N137 903 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 CDCA7Q9BWT1 371 aaPredicted RBP11.09□□□□□ -0.63
CD46-202ENST00000322918 THRAP3Q9Y2W1 955 aaKnown RBP11.09□□□□□ -0.63
CD46-202ENST00000322918 PALLDQ8WX93 1383 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 SHANK3Q9BYB0 1731 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 AFF2P51816 1311 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 MAP3K15Q6ZN16 1313 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 FRAT2O75474 233 aaPredicted RBP11.09□□□□□ -0.63
CD46-202ENST00000322918 RBM25P49756 843 aaKnown RBP11.09□□□□□ -0.63
CD46-202ENST00000322918 NFKBIBQ15653 356 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 HELBQ8NG08 1087 aaPredicted RBP11.09□□□□□ -0.63
CD46-202ENST00000322918 SNRKQ9NRH2 765 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 STAP2Q9UGK3 403 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 PALD1Q9ULE6 856 aa11.09□□□□□ -0.63
CD46-202ENST00000322918 ERBB4Q15303 1308 aa11.08□□□□□ -0.64
CD46-202ENST00000322918 GLRX3O76003 335 aaKnown RBP11.08□□□□□ -0.64
CD46-202ENST00000322918 GIGYF2Q6Y7W6 1299 aaKnown RBP11.08□□□□□ -0.64
CD46-202ENST00000322918 VSIG10Q8N0Z9 540 aa11.08□□□□□ -0.64
CD46-202ENST00000322918 FSD1Q9BTV5 496 aa11.08□□□□□ -0.64
CD46-202ENST00000322918 CCDC87Q9NVE4 849 aa11.08□□□□□ -0.64
CD46-202ENST00000322918 DBNLQ9UJU6 430 aaKnown RBP11.08□□□□□ -0.64
CD46-202ENST00000322918 RFX5P48382 616 aaPredicted RBP11.08□□□□□ -0.64
CD46-202ENST00000322918 DDX46Q7L014 1031 aaKnown RBP11.08□□□□□ -0.64
CD46-202ENST00000322918 SNAP23O00161 211 aa11.07□□□□□ -0.64
CD46-202ENST00000322918 IRS4O14654 1257 aaPredicted RBP11.07□□□□□ -0.64
CD46-202ENST00000322918 NLRP10Q86W26 655 aa11.07□□□□□ -0.64
CD46-202ENST00000322918 FAM227BQ96M60 508 aa11.07□□□□□ -0.64
CD46-202ENST00000322918 BCL9LQ86UU0 1499 aa11.07□□□□□ -0.64
CD46-202ENST00000322918 VPS72Q15906 364 aa11.07□□□□□ -0.64
CD46-202ENST00000322918 TNNI3KQ59H18 835 aa11.07□□□□□ -0.64
CD46-202ENST00000322918 GORABQ5T7V8 394 aa11.07□□□□□ -0.64
CD46-202ENST00000322918 INTS5Q6P9B9 1019 aaKnown RBP11.07□□□□□ -0.64
CD46-202ENST00000322918 GREM2Q9H772 168 aa11.07□□□□□ -0.64
CD46-202ENST00000322918 FPGT-TNNI3KV9GXZ4 949 aa11.07□□□□□ -0.64
CD46-202ENST00000322918 PLCH1Q4KWH8 1693 aa11.07□□□□□ -0.64
CD46-202ENST00000322918 KCNJ4P48050 445 aa11.07□□□□□ -0.64
CD46-202ENST00000322918 NEK4P51957 841 aa11.07□□□□□ -0.64
CD46-202ENST00000322918 ISCA1Q9BUE6 129 aa11.07□□□□□ -0.64
CD46-202ENST00000322918 NIP7Q9Y221 180 aaKnown RBP eCLIP11.07□□□□□ -0.64
CD46-202ENST00000322918 BARGINQ6ZT62 677 aa11.06□□□□□ -0.64
CD46-202ENST00000322918 KIAA1211Q6ZU35 1233 aa11.06□□□□□ -0.64
CD46-202ENST00000322918 COPRSQ9NQ92 184 aa11.06□□□□□ -0.64
CD46-202ENST00000322918 CPA1P15085 419 aa11.06□□□□□ -0.64
CD46-202ENST00000322918 IFIT5Q13325 482 aaKnown RBP11.06□□□□□ -0.64
CD46-202ENST00000322918 FOXD4L5Q5VV16 416 aaPredicted RBP11.06□□□□□ -0.64
CD46-202ENST00000322918 FOXD4L4Q8WXT5 416 aaPredicted RBP11.06□□□□□ -0.64
CD46-202ENST00000322918 CNNM1Q9NRU3 951 aa11.06□□□□□ -0.64
CD46-202ENST00000322918 UBN2Q6ZU65 1347 aa11.06□□□□□ -0.64
CD46-202ENST00000322918 SLIT2O94813 1529 aa11.06□□□□□ -0.64
CD46-202ENST00000322918 NPHP1O15259 732 aa11.05□□□□□ -0.64
CD46-202ENST00000322918 ITGA6P23229 1130 aa11.05□□□□□ -0.64
CD46-202ENST00000322918 GTF2E1P29083 439 aaPredicted RBP11.05□□□□□ -0.64
CD46-202ENST00000322918 FKBP4Q02790 459 aaKnown RBP eCLIP11.05□□□□□ -0.64
CD46-202ENST00000322918 RABL6Q3YEC7 729 aaPredicted RBP11.05□□□□□ -0.64
CD46-202ENST00000322918 LDHAL6AQ6ZMR3 332 aa11.05□□□□□ -0.64
CD46-202ENST00000322918 LINC00116Q8NCU8 138 aa11.05□□□□□ -0.64
CD46-202ENST00000322918 GLI3P10071 1580 aa11.05□□□□□ -0.64
CD46-202ENST00000322918 LRP6O75581 1613 aa11.05□□□□□ -0.64
CD46-202ENST00000322918 SUSD4Q5VX71 490 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms