RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 SEC31AO94979 1220 aaKnown RBP17.65■□□□□ 0.42
SCAP-202ENST00000320017 GNL2Q13823 731 aaKnown RBP17.65■□□□□ 0.42
SCAP-202ENST00000320017 HOMER1Q86YM7 354 aa17.65■□□□□ 0.42
SCAP-202ENST00000320017 PHF8Q9UPP1 1060 aa17.65■□□□□ 0.42
SCAP-202ENST00000320017 MYO3AQ8NEV4 1616 aa17.65■□□□□ 0.42
SCAP-202ENST00000320017 ZNF165P49910 485 aa17.65■□□□□ 0.42
SCAP-202ENST00000320017 MRVI1Q9Y6F6 885 aa17.65■□□□□ 0.42
SCAP-202ENST00000320017 ZNF853P0CG23 659 aa17.65■□□□□ 0.42
SCAP-202ENST00000320017 NOP2P46087 812 aaKnown RBP17.65■□□□□ 0.42
SCAP-202ENST00000320017 E2F4Q16254 413 aa17.65■□□□□ 0.42
SCAP-202ENST00000320017 UBXN4Q92575 508 aa17.65■□□□□ 0.42
SCAP-202ENST00000320017 ANXA1P04083 346 aa17.64■□□□□ 0.41
SCAP-202ENST00000320017 PLA2G4AP47712 749 aa17.64■□□□□ 0.41
SCAP-202ENST00000320017 FAM173BQ6P4H8 233 aa17.64■□□□□ 0.41
SCAP-202ENST00000320017 MNS1Q8NEH6 495 aa17.64■□□□□ 0.41
SCAP-202ENST00000320017 OAS2P29728 719 aaKnown RBP17.64■□□□□ 0.41
SCAP-202ENST00000320017 LRRN4CLQ8ND94 238 aa17.64■□□□□ 0.41
SCAP-202ENST00000320017 USP16Q9Y5T5 823 aa17.64■□□□□ 0.41
SCAP-202ENST00000320017 FHOD1Q9Y613 1164 aa17.64■□□□□ 0.41
SCAP-202ENST00000320017 YY1AP1Q9H869 796 aa17.63■□□□□ 0.41
SCAP-202ENST00000320017 PNMA6EA0A0J9YXQ4 647 aa17.63■□□□□ 0.41
SCAP-202ENST00000320017 RRP15Q9Y3B9 282 aaKnown RBP17.63■□□□□ 0.41
SCAP-202ENST00000320017 SKIDA1Q1XH10 827 aa17.63■□□□□ 0.41
SCAP-202ENST00000320017 BANK1Q8NDB2 785 aa17.63■□□□□ 0.41
SCAP-202ENST00000320017 DACT1Q9NYF0 836 aa17.63■□□□□ 0.41
SCAP-202ENST00000320017 COL3A1P02461 1466 aaPredicted RBP17.62■□□□□ 0.41
SCAP-202ENST00000320017 FAM135BQ49AJ0 1406 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 CCDC69A6NI79 296 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 CLGNO14967 610 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 CPA1P15085 419 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 LIG1P18858 919 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 PDE1AP54750 535 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 FAM193AP78312 1265 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 NOM1Q5C9Z4 860 aaKnown RBP17.62■□□□□ 0.41
SCAP-202ENST00000320017 RNF20Q5VTR2 975 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 CTR9Q6PD62 1173 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 UNC5CLQ8IV45 518 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 BICD2Q8TD16 824 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 AK7Q96M32 723 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 ESYT1Q9BSJ8 1104 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 STK31Q9BXU1 1019 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 DEF6Q9H4E7 631 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 CPS1P31327 1500 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 RAD50Q92878 1312 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 ANKRD65E5RJM6 399 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 SNW1Q13573 536 aaKnown RBP17.62■□□□□ 0.41
SCAP-202ENST00000320017 TTC31Q49AM3 519 aaPredicted RBP17.62■□□□□ 0.41
SCAP-202ENST00000320017 CCDC83Q8IWF9 413 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 RNF216Q9NWF9 866 aaPredicted RBP17.62■□□□□ 0.41
SCAP-202ENST00000320017 BECN2A8MW95 431 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 MTHFSDQ2M296 383 aaKnown RBP17.62■□□□□ 0.41
SCAP-202ENST00000320017 JRKLQ9Y4A0 524 aa17.62■□□□□ 0.41
SCAP-202ENST00000320017 TMEM87AQ8NBN3 555 aa17.61■□□□□ 0.41
SCAP-202ENST00000320017 PLEKHG3A1L390 1219 aa17.61■□□□□ 0.41
SCAP-202ENST00000320017 HMMRO75330 724 aa17.61■□□□□ 0.41
SCAP-202ENST00000320017 CASTP20810 708 aaKnown RBP17.61■□□□□ 0.41
SCAP-202ENST00000320017 ZC3H6P61129 1189 aaKnown RBP17.61■□□□□ 0.41
SCAP-202ENST00000320017 RPAP2Q8IXW5 612 aaPredicted RBP17.61■□□□□ 0.41
SCAP-202ENST00000320017 PNPLA6Q8IY17 1366 aa17.6■□□□□ 0.41
SCAP-202ENST00000320017 LRRC8AQ8IWT6 810 aa17.6■□□□□ 0.41
SCAP-202ENST00000320017 SLFNL1Q499Z3 407 aa17.6■□□□□ 0.41
SCAP-202ENST00000320017 SIRT1Q96EB6 747 aa17.6■□□□□ 0.41
SCAP-202ENST00000320017 NCAPGQ9BPX3 1015 aa17.6■□□□□ 0.41
SCAP-202ENST00000320017 REREQ9P2R6 1566 aa17.6■□□□□ 0.41
SCAP-202ENST00000320017 LEKR1Q6ZMV7 388 aa17.59■□□□□ 0.41
SCAP-202ENST00000320017 NFATC2IPQ8NCF5 419 aa17.59■□□□□ 0.41
SCAP-202ENST00000320017 TFIP11Q9UBB9 837 aaKnown RBP17.59■□□□□ 0.41
SCAP-202ENST00000320017 PTPRCP08575 1304 aa17.59■□□□□ 0.41
SCAP-202ENST00000320017 PATL2C9JE40 543 aaKnown RBP17.59■□□□□ 0.41
SCAP-202ENST00000320017 CCAR2Q8N163 923 aaKnown RBP17.59■□□□□ 0.41
SCAP-202ENST00000320017 A0A1B0GUL7 405 aa17.59■□□□□ 0.41
SCAP-202ENST00000320017 OS9Q13438 667 aaPredicted RBP17.58■□□□□ 0.41
SCAP-202ENST00000320017 RPAP1Q9BWH6 1393 aaPredicted RBP17.58■□□□□ 0.4
SCAP-202ENST00000320017 TCHHQ07283 1943 aa17.58■□□□□ 0.4
SCAP-202ENST00000320017 GJB2P29033 226 aa17.58■□□□□ 0.4
SCAP-202ENST00000320017 FAM177A1Q8N128 213 aaPredicted RBP17.58■□□□□ 0.4
SCAP-202ENST00000320017 EYA1Q99502 592 aa17.58■□□□□ 0.4
SCAP-202ENST00000320017 EPC1Q9H2F5 836 aa17.58■□□□□ 0.4
SCAP-202ENST00000320017 RTL1A6NKG5 1358 aa17.58■□□□□ 0.4
SCAP-202ENST00000320017 SURF6O75683 361 aaKnown RBP17.57■□□□□ 0.4
SCAP-202ENST00000320017 GNAI2P04899 355 aa17.57■□□□□ 0.4
SCAP-202ENST00000320017 MUM1L1Q5H9M0 696 aa17.57■□□□□ 0.4
SCAP-202ENST00000320017 SRLQ86TD4 932 aa17.57■□□□□ 0.4
SCAP-202ENST00000320017 FAM53CQ9NYF3 392 aa17.57■□□□□ 0.4
SCAP-202ENST00000320017 CPSF1Q10570 1443 aaKnown RBP17.57■□□□□ 0.4
SCAP-202ENST00000320017 ATP7BP35670 1465 aa17.57■□□□□ 0.4
SCAP-202ENST00000320017 CHL1O00533 1208 aa17.57■□□□□ 0.4
SCAP-202ENST00000320017 KRT85P78386 507 aa17.57■□□□□ 0.4
SCAP-202ENST00000320017 IL25Q9H293 177 aa17.57■□□□□ 0.4
SCAP-202ENST00000320017 URI1O94763 535 aaPredicted RBP17.56■□□□□ 0.4
SCAP-202ENST00000320017 H2AFXP16104 143 aaPredicted RBP17.56■□□□□ 0.4
SCAP-202ENST00000320017 PSEN1P49768 467 aa17.56■□□□□ 0.4
SCAP-202ENST00000320017 CNPY4Q8N129 248 aa17.56■□□□□ 0.4
SCAP-202ENST00000320017 LRRC59Q96AG4 307 aaKnown RBP17.56■□□□□ 0.4
SCAP-202ENST00000320017 LRRCC1Q9C099 1032 aa17.56■□□□□ 0.4
SCAP-202ENST00000320017 DNAJC5Q9H3Z4 198 aa17.56■□□□□ 0.4
SCAP-202ENST00000320017 SPG7Q9UQ90 795 aa17.56■□□□□ 0.4
SCAP-202ENST00000320017 ADGRB2O60241 1585 aa17.56■□□□□ 0.4
SCAP-202ENST00000320017 SMC1AQ14683 1233 aaKnown RBP17.56■□□□□ 0.4
SCAP-202ENST00000320017 PLA2G4DQ86XP0 818 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms