RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 EXOC6BQ9Y2D4 811 aa38.89■■■■□ 3.82
NECTIN3-201ENST00000319792 UBR3Q6ZT12 1888 aa38.88■■■■□ 3.81
NECTIN3-201ENST00000319792 C4AP0C0L4 1744 aa38.88■■■■□ 3.81
NECTIN3-201ENST00000319792 ZBTB38Q8NAP3 1195 aaPredicted RBP38.87■■■■□ 3.81
NECTIN3-201ENST00000319792 NOP58Q9Y2X3 529 aaKnown RBP38.87■■■■□ 3.81
NECTIN3-201ENST00000319792 GNPATO15228 680 aa38.86■■■■□ 3.81
NECTIN3-201ENST00000319792 GPTP24298 496 aa38.85■■■■□ 3.81
NECTIN3-201ENST00000319792 CLEC4GQ6UXB4 293 aa38.85■■■■□ 3.81
NECTIN3-201ENST00000319792 CDHR2Q9BYE9 1310 aa38.85■■■■□ 3.81
NECTIN3-201ENST00000319792 PLSCR1O15162 318 aa38.84■■■■□ 3.81
NECTIN3-201ENST00000319792 RAB11FIP3O75154 756 aa38.84■■■■□ 3.81
NECTIN3-201ENST00000319792 HMGB2P26583 209 aaKnown RBP38.84■■■■□ 3.81
NECTIN3-201ENST00000319792 FOXO4P98177 505 aa38.84■■■■□ 3.81
NECTIN3-201ENST00000319792 ZBTB47Q9UFB7 747 aaPredicted RBP38.84■■■■□ 3.81
NECTIN3-201ENST00000319792 ZNF652Q9Y2D9 606 aa38.84■■■■□ 3.81
NECTIN3-201ENST00000319792 RTCBQ9Y3I0 505 aaKnown RBP38.84■■■■□ 3.81
NECTIN3-201ENST00000319792 UBN2Q6ZU65 1347 aa38.84■■■■□ 3.81
NECTIN3-201ENST00000319792 EP400Q96L91 3159 aa38.84■■■■□ 3.81
NECTIN3-201ENST00000319792 MYH3P11055 1940 aa38.84■■■■□ 3.81
NECTIN3-201ENST00000319792 HSP90AB4PQ58FF6 505 aa38.83■■■■□ 3.81
NECTIN3-201ENST00000319792 PLA2G12BQ9BX93 195 aa38.83■■■■□ 3.81
NECTIN3-201ENST00000319792 SURF6O75683 361 aaKnown RBP38.82■■■■□ 3.8
NECTIN3-201ENST00000319792 TSHZ2Q9NRE2 1034 aa38.82■■■■□ 3.8
NECTIN3-201ENST00000319792 LRRCC1Q9C099 1032 aa38.81■■■■□ 3.8
NECTIN3-201ENST00000319792 NARFQ9UHQ1 456 aa38.81■■■■□ 3.8
NECTIN3-201ENST00000319792 PARP10Q53GL7 1025 aa38.8■■■■□ 3.8
NECTIN3-201ENST00000319792 AK7Q96M32 723 aa38.8■■■■□ 3.8
NECTIN3-201ENST00000319792 TXNRD1Q16881 649 aa38.79■■■■□ 3.8
NECTIN3-201ENST00000319792 LAMB2P55268 1798 aa38.78■■■■□ 3.8
NECTIN3-201ENST00000319792 APBB1O00213 710 aa38.78■■■■□ 3.8
NECTIN3-201ENST00000319792 SMARCA5O60264 1052 aaPredicted RBP38.78■■■■□ 3.8
NECTIN3-201ENST00000319792 RTL5Q5HYW3 569 aaPredicted RBP38.78■■■■□ 3.8
NECTIN3-201ENST00000319792 PROM2Q8N271 834 aa38.78■■■■□ 3.8
NECTIN3-201ENST00000319792 ADRA2BP18089 450 aa38.77■■■■□ 3.8
NECTIN3-201ENST00000319792 RFX5P48382 616 aaPredicted RBP38.77■■■■□ 3.8
NECTIN3-201ENST00000319792 FAM89AQ96GI7 184 aa38.77■■■■□ 3.8
NECTIN3-201ENST00000319792 LMBR1LQ6UX01 489 aa38.76■■■■□ 3.8
NECTIN3-201ENST00000319792 AMIGO3Q86WK7 504 aa38.76■■■■□ 3.8
NECTIN3-201ENST00000319792 COL24A1Q17RW2 1714 aa38.76■■■■□ 3.8
NECTIN3-201ENST00000319792 APBA3O96018 575 aa38.75■■■■□ 3.79
NECTIN3-201ENST00000319792 COPRSQ9NQ92 184 aa38.75■■■■□ 3.79
NECTIN3-201ENST00000319792 TRMT112Q9UI30 125 aaKnown RBP38.75■■■■□ 3.79
NECTIN3-201ENST00000319792 BCL2L12Q9HB09 334 aa38.74■■■■□ 3.79
NECTIN3-201ENST00000319792 ARHGEF1Q92888 912 aaKnown RBP38.73■■■■□ 3.79
NECTIN3-201ENST00000319792 KIF1BPQ96EK5 621 aa38.73■■■■□ 3.79
NECTIN3-201ENST00000319792 PA2G4Q9UQ80 394 aaKnown RBP38.73■■■■□ 3.79
NECTIN3-201ENST00000319792 NIP7Q9Y221 180 aaKnown RBP eCLIP38.73■■■■□ 3.79
NECTIN3-201ENST00000319792 SUSD4Q5VX71 490 aa38.73■■■■□ 3.79
NECTIN3-201ENST00000319792 SMIM5Q71RC9 77 aa38.73■■■■□ 3.79
NECTIN3-201ENST00000319792 ERC1Q8IUD2 1116 aa38.73■■■■□ 3.79
NECTIN3-201ENST00000319792 PLEKHM2Q8IWE5 1019 aa38.73■■■■□ 3.79
NECTIN3-201ENST00000319792 RHPN1Q8TCX5 695 aa38.73■■■■□ 3.79
NECTIN3-201ENST00000319792 DDX60Q8IY21 1712 aaKnown RBP38.72■■■■□ 3.79
NECTIN3-201ENST00000319792 TRAPPC3LQ5T215 181 aa38.71■■■■□ 3.79
NECTIN3-201ENST00000319792 UTP14AQ9BVJ6 771 aaKnown RBP38.71■■■■□ 3.79
NECTIN3-201ENST00000319792 ZPR1O75312 459 aa38.7■■■■□ 3.79
NECTIN3-201ENST00000319792 FAM161AQ3B820 660 aa38.7■■■■□ 3.79
NECTIN3-201ENST00000319792 USPL1Q5W0Q7 1092 aa38.7■■■■□ 3.79
NECTIN3-201ENST00000319792 C16orf71Q8IYS4 520 aaPredicted RBP38.7■■■■□ 3.79
NECTIN3-201ENST00000319792 USP42Q9H9J4 1324 aaKnown RBP38.7■■■■□ 3.79
NECTIN3-201ENST00000319792 CSF1RP07333 972 aa38.69■■■■□ 3.78
NECTIN3-201ENST00000319792 PTPN12Q05209 780 aaKnown RBP38.69■■■■□ 3.78
NECTIN3-201ENST00000319792 BACH2Q9BYV9 841 aa38.69■■■■□ 3.78
NECTIN3-201ENST00000319792 SH3TC1Q8TE82 1336 aa38.69■■■■□ 3.78
NECTIN3-201ENST00000319792 IRS4O14654 1257 aaPredicted RBP38.68■■■■□ 3.78
NECTIN3-201ENST00000319792 SYNE4Q8N205 404 aa38.68■■■■□ 3.78
NECTIN3-201ENST00000319792 SRP68Q9UHB9 627 aaKnown RBP38.68■■■■□ 3.78
NECTIN3-201ENST00000319792 SALL3Q9BXA9 1300 aa38.68■■■■□ 3.78
NECTIN3-201ENST00000319792 NTSR2O95665 410 aa38.68■■■■□ 3.78
NECTIN3-201ENST00000319792 OS9Q13438 667 aaPredicted RBP38.68■■■■□ 3.78
NECTIN3-201ENST00000319792 SSFA2P28290 1259 aa38.67■■■■□ 3.78
NECTIN3-201ENST00000319792 G3BP1Q13283 466 aaKnown RBP eCLIP38.67■■■■□ 3.78
NECTIN3-201ENST00000319792 OTUD7AQ8TE49 926 aaPredicted RBP38.67■■■■□ 3.78
NECTIN3-201ENST00000319792 C8orf34Q49A92 452 aa38.66■■■■□ 3.78
NECTIN3-201ENST00000319792 RFC4P35249 363 aa38.65■■■■□ 3.78
NECTIN3-201ENST00000319792 PDE8AO60658 829 aa38.64■■■■□ 3.78
NECTIN3-201ENST00000319792 KLHDC4Q8TBB5 520 aa38.64■■■■□ 3.78
NECTIN3-201ENST00000319792 CHMP3Q9Y3E7 222 aa38.64■■■■□ 3.78
NECTIN3-201ENST00000319792 TUBGCP6Q96RT7 1819 aa38.64■■■■□ 3.78
NECTIN3-201ENST00000319792 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP38.63■■■■□ 3.78
NECTIN3-201ENST00000319792 CTSWP56202 376 aa38.63■■■■□ 3.78
NECTIN3-201ENST00000319792 BMP2KLQ5H9B9 411 aa38.63■■■■□ 3.78
NECTIN3-201ENST00000319792 OSBPL3Q9H4L5 887 aa38.63■■■■□ 3.78
NECTIN3-201ENST00000319792 PHF14O94880 888 aa38.63■■■■□ 3.77
NECTIN3-201ENST00000319792 TBC1D9BQ66K14 1250 aa38.63■■■■□ 3.77
NECTIN3-201ENST00000319792 IL1RAPL2Q9NP60 686 aa38.62■■■■□ 3.77
NECTIN3-201ENST00000319792 SASH1O94885 1247 aa38.61■■■■□ 3.77
NECTIN3-201ENST00000319792 HSP90B1P14625 803 aaKnown RBP38.61■■■■□ 3.77
NECTIN3-201ENST00000319792 TTLL11Q8NHH1 800 aa38.61■■■■□ 3.77
NECTIN3-201ENST00000319792 SIL1Q9H173 461 aa38.6■■■■□ 3.77
NECTIN3-201ENST00000319792 CASZ1Q86V15 1759 aa38.6■■■■□ 3.77
NECTIN3-201ENST00000319792 PDE1AP54750 535 aa38.58■■■■□ 3.77
NECTIN3-201ENST00000319792 AKT1S1Q96B36 256 aa38.58■■■■□ 3.77
NECTIN3-201ENST00000319792 STAP2Q9UGK3 403 aa38.58■■■■□ 3.77
NECTIN3-201ENST00000319792 TTC22Q5TAA0 569 aa38.58■■■■□ 3.77
NECTIN3-201ENST00000319792 AOX1Q06278 1338 aa38.57■■■■□ 3.76
NECTIN3-201ENST00000319792 CCDC57Q2TAC2 916 aa38.57■■■■□ 3.76
NECTIN3-201ENST00000319792 SETDB2Q96T68 719 aa38.57■■■■□ 3.76
NECTIN3-201ENST00000319792 FAM177BA6PVY3 158 aa38.56■■■■□ 3.76
NECTIN3-201ENST00000319792 MX1P20591 662 aa38.56■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms