RNA–Protein interactions for RNA: ENST00000318809.11

LTBP4-204, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,700 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-204ENST00000318809 NIP7Q9Y221 180 aaKnown RBP eCLIP22.09■■□□□ 1.13
LTBP4-204ENST00000318809 AFDNP55196 1824 aaKnown RBP22.09■■□□□ 1.13
LTBP4-204ENST00000318809 CCDC191Q8NCU4 936 aa22.09■■□□□ 1.13
LTBP4-204ENST00000318809 CWC25Q9NXE8 425 aaPredicted RBP22.09■■□□□ 1.13
LTBP4-204ENST00000318809 JARID2Q92833 1246 aaPredicted RBP22.08■■□□□ 1.12
LTBP4-204ENST00000318809 NBPF7P0C2Y1 421 aaPredicted RBP22.07■■□□□ 1.12
LTBP4-204ENST00000318809 BICDL1Q6ZP65 573 aa22.07■■□□□ 1.12
LTBP4-204ENST00000318809 ZBTB40Q9NUA8 1239 aa22.07■■□□□ 1.12
LTBP4-204ENST00000318809 IBTKQ9P2D0 1353 aaPredicted RBP22.07■■□□□ 1.12
LTBP4-204ENST00000318809 GRM8O00222 908 aa22.06■■□□□ 1.12
LTBP4-204ENST00000318809 NFIXQ14938 502 aa22.06■■□□□ 1.12
LTBP4-204ENST00000318809 SUSD4Q5VX71 490 aa22.06■■□□□ 1.12
LTBP4-204ENST00000318809 C9orf78Q9NZ63 289 aaPredicted RBP22.06■■□□□ 1.12
LTBP4-204ENST00000318809 UTYO14607 1347 aa22.05■■□□□ 1.12
LTBP4-204ENST00000318809 H7C1W4 665 aa22.04■■□□□ 1.12
LTBP4-204ENST00000318809 CASP7P55210 303 aa22.04■■□□□ 1.12
LTBP4-204ENST00000318809 RTL5Q5HYW3 569 aaPredicted RBP22.04■■□□□ 1.12
LTBP4-204ENST00000318809 C1orf115Q9H7X2 142 aa22.04■■□□□ 1.12
LTBP4-204ENST00000318809 FAM177BA6PVY3 158 aa22.03■■□□□ 1.12
LTBP4-204ENST00000318809 TM4SF1P30408 202 aa22.03■■□□□ 1.12
LTBP4-204ENST00000318809 R3HDM1Q15032 1099 aaKnown RBP22.03■■□□□ 1.12
LTBP4-204ENST00000318809 PARP10Q53GL7 1025 aa22.03■■□□□ 1.12
LTBP4-204ENST00000318809 UBE3BQ7Z3V4 1068 aa22.03■■□□□ 1.12
LTBP4-204ENST00000318809 SYNE4Q8N205 404 aa22.03■■□□□ 1.12
LTBP4-204ENST00000318809 SETDB2Q96T68 719 aa22.03■■□□□ 1.12
LTBP4-204ENST00000318809 MSL1Q68DK7 614 aa22.03■■□□□ 1.12
LTBP4-204ENST00000318809 FAM89AQ96GI7 184 aa22.03■■□□□ 1.12
LTBP4-204ENST00000318809 GNAI3P08754 354 aa22.02■■□□□ 1.12
LTBP4-204ENST00000318809 UBTFL1P0CB47 393 aaPredicted RBP22.02■■□□□ 1.12
LTBP4-204ENST00000318809 CHMP4BQ9H444 224 aaKnown RBP22.02■■□□□ 1.12
LTBP4-204ENST00000318809 TRMT112Q9UI30 125 aaKnown RBP22.02■■□□□ 1.12
LTBP4-204ENST00000318809 NTSR2O95665 410 aa22.01■■□□□ 1.11
LTBP4-204ENST00000318809 PCCAP05165 728 aaPredicted RBP22.01■■□□□ 1.11
LTBP4-204ENST00000318809 NLGN1Q8N2Q7 840 aa22.01■■□□□ 1.11
LTBP4-204ENST00000318809 ZBTB38Q8NAP3 1195 aaPredicted RBP22.01■■□□□ 1.11
LTBP4-204ENST00000318809 COL24A1Q17RW2 1714 aa22.01■■□□□ 1.11
LTBP4-204ENST00000318809 DDR1Q08345 913 aa22■■□□□ 1.11
LTBP4-204ENST00000318809 KAZALD1Q96I82 304 aa22■■□□□ 1.11
LTBP4-204ENST00000318809 UTP14AQ9BVJ6 771 aaKnown RBP22■■□□□ 1.11
LTBP4-204ENST00000318809 LRRFIP2Q9Y608 721 aaKnown RBP22■■□□□ 1.11
LTBP4-204ENST00000318809 SUCLG2Q96I99 432 aa22■■□□□ 1.11
LTBP4-204ENST00000318809 PCDHB15Q9Y5E8 787 aa22■■□□□ 1.11
LTBP4-204ENST00000318809 PSDA5PKW4 1024 aaPredicted RBP21.99■■□□□ 1.11
LTBP4-204ENST00000318809 GNAI2P04899 355 aa21.99■■□□□ 1.11
LTBP4-204ENST00000318809 PPP1R42Q7Z4L9 355 aa21.99■■□□□ 1.11
LTBP4-204ENST00000318809 NUTM1Q86Y26 1132 aa21.99■■□□□ 1.11
LTBP4-204ENST00000318809 CARMIL3Q8ND23 1372 aa21.99■■□□□ 1.11
LTBP4-204ENST00000318809 CENPQQ7L2Z9 268 aaPredicted RBP21.98■■□□□ 1.11
LTBP4-204ENST00000318809 CASZ1Q86V15 1759 aa21.98■■□□□ 1.11
LTBP4-204ENST00000318809 POLRMTO00411 1230 aaKnown RBP21.97■■□□□ 1.11
LTBP4-204ENST00000318809 EPHA10Q5JZY3 1008 aa21.97■■□□□ 1.11
LTBP4-204ENST00000318809 NBPF5PQ86XG9 351 aaPredicted RBP21.97■■□□□ 1.11
LTBP4-204ENST00000318809 SH3TC1Q8TE82 1336 aa21.96■■□□□ 1.11
LTBP4-204ENST00000318809 MMP10P09238 476 aa21.96■■□□□ 1.11
LTBP4-204ENST00000318809 ERFEQ4G0M1 354 aa21.96■■□□□ 1.11
LTBP4-204ENST00000318809 SLC16A10Q8TF71 515 aa21.96■■□□□ 1.11
LTBP4-204ENST00000318809 CDHR2Q9BYE9 1310 aa21.96■■□□□ 1.11
LTBP4-204ENST00000318809 SERPINB2P05120 415 aa21.95■■□□□ 1.1
LTBP4-204ENST00000318809 CCDC24Q8N4L8 307 aa21.95■■□□□ 1.1
LTBP4-204ENST00000318809 BICC1Q9H694 974 aaKnown RBP21.95■■□□□ 1.1
LTBP4-204ENST00000318809 IRS4O14654 1257 aaPredicted RBP21.94■■□□□ 1.1
LTBP4-204ENST00000318809 HCLS1P14317 486 aaPredicted RBP21.94■■□□□ 1.1
LTBP4-204ENST00000318809 FOXO4P98177 505 aa21.94■■□□□ 1.1
LTBP4-204ENST00000318809 TPTE2Q6XPS3 522 aa21.94■■□□□ 1.1
LTBP4-204ENST00000318809 ANKRD44Q8N8A2 993 aa21.94■■□□□ 1.1
LTBP4-204ENST00000318809 NYXQ9GZU5 481 aa21.94■■□□□ 1.1
LTBP4-204ENST00000318809 ABCC12Q96J65 1359 aa21.94■■□□□ 1.1
LTBP4-204ENST00000318809 ZBTB7AO95365 584 aa21.94■■□□□ 1.1
LTBP4-204ENST00000318809 CEP85Q6P2H3 762 aa21.94■■□□□ 1.1
LTBP4-204ENST00000318809 SIRT2Q8IXJ6 389 aa21.94■■□□□ 1.1
LTBP4-204ENST00000318809 PRR5LQ6MZQ0 368 aa21.93■■□□□ 1.1
LTBP4-204ENST00000318809 PLA2G12BQ9BX93 195 aa21.93■■□□□ 1.1
LTBP4-204ENST00000318809 KDM2BQ8NHM5 1336 aa21.92■■□□□ 1.1
LTBP4-204ENST00000318809 GTF2E1P29083 439 aaPredicted RBP21.92■■□□□ 1.1
LTBP4-204ENST00000318809 SLC10A5Q5PT55 438 aa21.92■■□□□ 1.1
LTBP4-204ENST00000318809 CNBD1Q8NA66 436 aa21.92■■□□□ 1.1
LTBP4-204ENST00000318809 HDAC5Q9UQL6 1122 aa21.92■■□□□ 1.1
LTBP4-204ENST00000318809 DDX60Q8IY21 1712 aaKnown RBP21.91■■□□□ 1.1
LTBP4-204ENST00000318809 RABL6Q3YEC7 729 aaPredicted RBP21.91■■□□□ 1.1
LTBP4-204ENST00000318809 PARP3Q9Y6F1 533 aa21.91■■□□□ 1.1
LTBP4-204ENST00000318809 NRXN2Q9P2S2 1712 aa21.9■■□□□ 1.1
LTBP4-204ENST00000318809 PNMA6EA0A0J9YXQ4 647 aa21.9■■□□□ 1.1
LTBP4-204ENST00000318809 SOCS7O14512 581 aa21.9■■□□□ 1.1
LTBP4-204ENST00000318809 C3orf67Q6ZVT6 689 aa21.9■■□□□ 1.1
LTBP4-204ENST00000318809 PDE8AO60658 829 aa21.89■■□□□ 1.1
LTBP4-204ENST00000318809 ATP8B2P98198 1209 aa21.89■■□□□ 1.1
LTBP4-204ENST00000318809 LMBR1LQ6UX01 489 aa21.89■■□□□ 1.1
LTBP4-204ENST00000318809 RPAP2Q8IXW5 612 aaPredicted RBP21.89■■□□□ 1.1
LTBP4-204ENST00000318809 MTFR1LQ9H019 292 aa21.89■■□□□ 1.1
LTBP4-204ENST00000318809 ATF5Q9Y2D1 282 aaPredicted RBP21.89■■□□□ 1.1
LTBP4-204ENST00000318809 MTX1Q13505 466 aa21.89■■□□□ 1.09
LTBP4-204ENST00000318809 LAMB2P55268 1798 aa21.88■■□□□ 1.09
LTBP4-204ENST00000318809 NPHP1O15259 732 aa21.88■■□□□ 1.09
LTBP4-204ENST00000318809 CSF1RP07333 972 aa21.88■■□□□ 1.09
LTBP4-204ENST00000318809 CTSWP56202 376 aa21.88■■□□□ 1.09
LTBP4-204ENST00000318809 RWDD1Q9H446 243 aaPredicted RBP21.88■■□□□ 1.09
LTBP4-204ENST00000318809 IGHDP01880 384 aa21.87■■□□□ 1.09
LTBP4-204ENST00000318809 TTLL11Q8NHH1 800 aa21.87■■□□□ 1.09
LTBP4-204ENST00000318809 CCDC85AQ96PX6 553 aaPredicted RBP21.87■■□□□ 1.09
LTBP4-204ENST00000318809 SRGAP3O43295 1099 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms