RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 FSD2A1L4K1 749 aa21.83■■□□□ 1.09
UBE2N-201ENST00000318066 RBM25P49756 843 aaKnown RBP21.83■■□□□ 1.08
UBE2N-201ENST00000318066 UQCRFS1P1P0C7P4 283 aa21.82■■□□□ 1.08
UBE2N-201ENST00000318066 ARFGAP3Q9NP61 516 aa21.82■■□□□ 1.08
UBE2N-201ENST00000318066 C11orf95C9JLR9 678 aaPredicted RBP21.82■■□□□ 1.08
UBE2N-201ENST00000318066 C6orf163Q5TEZ5 329 aa21.82■■□□□ 1.08
UBE2N-201ENST00000318066 ZHX1Q9UKY1 873 aaPredicted RBP21.82■■□□□ 1.08
UBE2N-201ENST00000318066 PDE4BQ07343 736 aa21.82■■□□□ 1.08
UBE2N-201ENST00000318066 PPM1EQ8WY54 764 aa21.82■■□□□ 1.08
UBE2N-201ENST00000318066 METAP2P50579 478 aaKnown RBP eCLIP21.82■■□□□ 1.08
UBE2N-201ENST00000318066 GUCY1B3Q02153 619 aa21.82■■□□□ 1.08
UBE2N-201ENST00000318066 CPLX3Q8WVH0 158 aa21.82■■□□□ 1.08
UBE2N-201ENST00000318066 PIBF1Q8WXW3 757 aa21.82■■□□□ 1.08
UBE2N-201ENST00000318066 TMX3Q96JJ7 454 aa21.82■■□□□ 1.08
UBE2N-201ENST00000318066 GOPCQ9HD26 462 aa21.82■■□□□ 1.08
UBE2N-201ENST00000318066 PTPN23Q9H3S7 1636 aa21.82■■□□□ 1.08
UBE2N-201ENST00000318066 TMEM67Q5HYA8 995 aa21.81■■□□□ 1.08
UBE2N-201ENST00000318066 TFIP11Q9UBB9 837 aaKnown RBP21.81■■□□□ 1.08
UBE2N-201ENST00000318066 GTF2F1P35269 517 aaKnown RBP eCLIP21.81■■□□□ 1.083e-6■■□□□ 12.8
UBE2N-201ENST00000318066 ANKRD24Q8TF21 1146 aa21.81■■□□□ 1.08
UBE2N-201ENST00000318066 MIS18AQ9NYP9 233 aa21.81■■□□□ 1.08
UBE2N-201ENST00000318066 ABCC5O15440 1437 aa21.81■■□□□ 1.08
UBE2N-201ENST00000318066 PRPHP41219 470 aa21.81■■□□□ 1.08
UBE2N-201ENST00000318066 MAPK8IP2Q13387 824 aaPredicted RBP21.81■■□□□ 1.08
UBE2N-201ENST00000318066 TIGD1Q96MW7 591 aa21.81■■□□□ 1.08
UBE2N-201ENST00000318066 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.81■■□□□ 1.08
UBE2N-201ENST00000318066 WASLO00401 505 aaPredicted RBP21.8■■□□□ 1.08
UBE2N-201ENST00000318066 HSF2BPO75031 334 aa21.8■■□□□ 1.08
UBE2N-201ENST00000318066 N4BP3O15049 544 aa21.8■■□□□ 1.08
UBE2N-201ENST00000318066 SYKP43405 635 aa21.8■■□□□ 1.08
UBE2N-201ENST00000318066 SPTY2D1Q68D10 685 aaPredicted RBP21.8■■□□□ 1.08
UBE2N-201ENST00000318066 F6X3S4 739 aa21.8■■□□□ 1.08
UBE2N-201ENST00000318066 NOLC1Q14978 699 aaKnown RBP eCLIP21.8■■□□□ 1.08
UBE2N-201ENST00000318066 FEZ1Q99689 392 aa21.8■■□□□ 1.08
UBE2N-201ENST00000318066 FERMT1Q9BQL6 677 aa21.8■■□□□ 1.08
UBE2N-201ENST00000318066 CTAGE15A4D2H0 777 aa21.79■■□□□ 1.08
UBE2N-201ENST00000318066 CTAGE8P0CG41 777 aa21.79■■□□□ 1.08
UBE2N-201ENST00000318066 CTAGE6Q86UF2 777 aa21.79■■□□□ 1.08
UBE2N-201ENST00000318066 CTAGE4Q8IX94 777 aa21.79■■□□□ 1.08
UBE2N-201ENST00000318066 TMCO5BA8MYB1 307 aa21.79■■□□□ 1.08
UBE2N-201ENST00000318066 ZKSCAN5Q9Y2L8 839 aa21.79■■□□□ 1.08
UBE2N-201ENST00000318066 DCAF8L1A6NGE4 600 aa21.79■■□□□ 1.08
UBE2N-201ENST00000318066 CCT2P78371 535 aaKnown RBP21.79■■□□□ 1.08
UBE2N-201ENST00000318066 MFSD6Q6ZSS7 791 aa21.79■■□□□ 1.08
UBE2N-201ENST00000318066 CCDC155Q8N6L0 562 aa21.79■■□□□ 1.08
UBE2N-201ENST00000318066 UBA5Q9GZZ9 404 aa21.79■■□□□ 1.08
UBE2N-201ENST00000318066 MRPS27Q92552 414 aaKnown RBP21.78■■□□□ 1.08
UBE2N-201ENST00000318066 CDC5LQ99459 802 aaKnown RBP21.78■■□□□ 1.08
UBE2N-201ENST00000318066 TRMT112Q9UI30 125 aaKnown RBP21.78■■□□□ 1.08
UBE2N-201ENST00000318066 AKR1B10O60218 316 aa21.78■■□□□ 1.08
UBE2N-201ENST00000318066 HCLS1P14317 486 aaPredicted RBP21.78■■□□□ 1.08
UBE2N-201ENST00000318066 UBASH3AP57075 661 aa21.78■■□□□ 1.08
UBE2N-201ENST00000318066 KRT23Q9C075 422 aa21.78■■□□□ 1.08
UBE2N-201ENST00000318066 CNNM2Q9H8M5 875 aa21.78■■□□□ 1.08
UBE2N-201ENST00000318066 BAG3O95817 575 aa21.78■■□□□ 1.08
UBE2N-201ENST00000318066 SF3B2Q13435 895 aaKnown RBP21.78■■□□□ 1.08
UBE2N-201ENST00000318066 OPA1O60313 960 aa21.78■■□□□ 1.08
UBE2N-201ENST00000318066 CTNNA2P26232 953 aa21.78■■□□□ 1.08
UBE2N-201ENST00000318066 NSRP1Q9H0G5 558 aaKnown RBP21.78■■□□□ 1.08
UBE2N-201ENST00000318066 RBM27Q9P2N5 1060 aaKnown RBP21.78■■□□□ 1.08
UBE2N-201ENST00000318066 LMAN1P49257 510 aa21.77■■□□□ 1.08
UBE2N-201ENST00000318066 USP37Q86T82 979 aa21.77■■□□□ 1.08
UBE2N-201ENST00000318066 CCDC96Q2M329 555 aa21.77■■□□□ 1.08
UBE2N-201ENST00000318066 PPP1R42Q7Z4L9 355 aa21.77■■□□□ 1.08
UBE2N-201ENST00000318066 BCCIPQ9P287 314 aaKnown RBP eCLIP21.77■■□□□ 1.08
UBE2N-201ENST00000318066 ZPR1O75312 459 aa21.77■■□□□ 1.08
UBE2N-201ENST00000318066 CTNNBL1Q8WYA6 563 aaPredicted RBP21.77■■□□□ 1.08
UBE2N-201ENST00000318066 JADE2Q9NQC1 790 aa21.77■■□□□ 1.08
UBE2N-201ENST00000318066 CWC25Q9NXE8 425 aaPredicted RBP21.77■■□□□ 1.08
UBE2N-201ENST00000318066 GNAQP50148 359 aa21.77■■□□□ 1.08
UBE2N-201ENST00000318066 NME9Q86XW9 330 aa21.77■■□□□ 1.08
UBE2N-201ENST00000318066 RHPN1Q8TCX5 695 aa21.77■■□□□ 1.08
UBE2N-201ENST00000318066 CCDC85AQ96PX6 553 aaPredicted RBP21.77■■□□□ 1.08
UBE2N-201ENST00000318066 STMN4Q9H169 189 aaPredicted RBP21.77■■□□□ 1.08
UBE2N-201ENST00000318066 SKILP12757 684 aa21.76■■□□□ 1.07
UBE2N-201ENST00000318066 MAATS1Q7Z4T9 603 aa21.76■■□□□ 1.07
UBE2N-201ENST00000318066 BICRAQ9NZM4 1560 aa21.76■■□□□ 1.07
UBE2N-201ENST00000318066 ALDH1L1O75891 902 aa21.76■■□□□ 1.07
UBE2N-201ENST00000318066 KIAA0753Q2KHM9 967 aa21.76■■□□□ 1.07
UBE2N-201ENST00000318066 ANKRD44Q8N8A2 993 aa21.76■■□□□ 1.07
UBE2N-201ENST00000318066 GDPD2Q9HCC8 539 aa21.76■■□□□ 1.07
UBE2N-201ENST00000318066 BIN1O00499 593 aa21.76■■□□□ 1.07
UBE2N-201ENST00000318066 ZC3H6P61129 1189 aaKnown RBP21.76■■□□□ 1.07
UBE2N-201ENST00000318066 PIP4K2BP78356 416 aa21.76■■□□□ 1.07
UBE2N-201ENST00000318066 IDEP14735 1019 aa21.76■■□□□ 1.07
UBE2N-201ENST00000318066 EMILIN1Q9Y6C2 1016 aa21.76■■□□□ 1.07
UBE2N-201ENST00000318066 ERMNQ8TAM6 284 aa21.75■■□□□ 1.07
UBE2N-201ENST00000318066 SELENOOQ9BVL4 669 aa21.75■■□□□ 1.07
UBE2N-201ENST00000318066 KAT14Q9H8E8 782 aa21.75■■□□□ 1.07
UBE2N-201ENST00000318066 TRIM47Q96LD4 638 aa21.75■■□□□ 1.07
UBE2N-201ENST00000318066 PHF8Q9UPP1 1060 aa21.75■■□□□ 1.07
UBE2N-201ENST00000318066 IQGAP2Q13576 1575 aa21.75■■□□□ 1.07
UBE2N-201ENST00000318066 NOP2P46087 812 aaKnown RBP21.75■■□□□ 1.07
UBE2N-201ENST00000318066 SPINK5Q9NQ38 1064 aaPredicted RBP21.75■■□□□ 1.07
UBE2N-201ENST00000318066 SLU7O95391 586 aaKnown RBP21.75■■□□□ 1.07
UBE2N-201ENST00000318066 HSPA4P34932 840 aa21.75■■□□□ 1.07
UBE2N-201ENST00000318066 ACTN2P35609 894 aa21.74■■□□□ 1.07
UBE2N-201ENST00000318066 MBIPQ9NS73 344 aa21.74■■□□□ 1.07
UBE2N-201ENST00000318066 EXOC1Q9NV70 894 aa21.74■■□□□ 1.07
UBE2N-201ENST00000318066 INTS4Q96HW7 963 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms