RNA–Protein interactions for RNA: ENST00000317623.8

PCNX4-201, Transcript of pecanex 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCNX4, Length 17,339 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-201ENST00000317623 ZNF569Q5MCW4 686 aa7.54□□□□□ -1.2
PCNX4-201ENST00000317623 CYLC1P35663 651 aaPredicted RBP7.54□□□□□ -1.2
PCNX4-201ENST00000317623 ISM2Q6H9L7 571 aa7.54□□□□□ -1.2
PCNX4-201ENST00000317623 NUCB1Q02818 461 aa7.54□□□□□ -1.2
PCNX4-201ENST00000317623 SRGAP3O43295 1099 aa7.54□□□□□ -1.2
PCNX4-201ENST00000317623 ZSCAN16Q9H4T2 348 aaPredicted RBP7.54□□□□□ -1.2
PCNX4-201ENST00000317623 PFDN1O60925 122 aa7.54□□□□□ -1.2
PCNX4-201ENST00000317623 CUX2O14529 1486 aa7.54□□□□□ -1.2
PCNX4-201ENST00000317623 ZNF75DP51815 510 aa7.54□□□□□ -1.2
PCNX4-201ENST00000317623 SH3BGRP55822 239 aaPredicted RBP7.54□□□□□ -1.2
PCNX4-201ENST00000317623 MICAL1Q8TDZ2 1067 aa7.54□□□□□ -1.2
PCNX4-201ENST00000317623 KARSQ15046 597 aaKnown RBP7.54□□□□□ -1.2
PCNX4-201ENST00000317623 PUS7Q96PZ0 661 aaKnown RBP7.54□□□□□ -1.2
PCNX4-201ENST00000317623 IFNKQ9P0W0 207 aa7.54□□□□□ -1.2
PCNX4-201ENST00000317623 RIPOR2Q9Y4F9 1068 aa7.54□□□□□ -1.2
PCNX4-201ENST00000317623 SNCBQ16143 134 aa7.54□□□□□ -1.2
PCNX4-201ENST00000317623 JRKLQ9Y4A0 524 aa7.54□□□□□ -1.2
PCNX4-201ENST00000317623 MYO1BO43795 1136 aa7.54□□□□□ -1.2
PCNX4-201ENST00000317623 RFC1P35251 1148 aaPredicted RBP7.53□□□□□ -1.2
PCNX4-201ENST00000317623 RNF10Q8N5U6 811 aaKnown RBP7.53□□□□□ -1.2
PCNX4-201ENST00000317623 ZNF428Q96B54 188 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 PYM1Q9BRP8 204 aaKnown RBP7.53□□□□□ -1.2
PCNX4-201ENST00000317623 DNAJC25Q9H1X3 360 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 TMEM132AQ24JP5 1023 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 RPUSD2Q8IZ73 545 aaKnown RBP7.53□□□□□ -1.2
PCNX4-201ENST00000317623 GOLGA6BA6NDN3 693 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 CFAP58Q5T655 872 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 SREK1Q8WXA9 508 aaKnown RBP7.53□□□□□ -1.2
PCNX4-201ENST00000317623 GLRX3O76003 335 aaKnown RBP7.53□□□□□ -1.2
PCNX4-201ENST00000317623 RPAP2Q8IXW5 612 aaPredicted RBP7.53□□□□□ -1.2
PCNX4-201ENST00000317623 STAC3Q96MF2 364 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 SMC6Q96SB8 1091 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 FERP16591 822 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 HPDP32754 393 aaPredicted RBP7.53□□□□□ -1.2
PCNX4-201ENST00000317623 TSGA10Q9BZW7 698 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 DHX29Q7Z478 1369 aaKnown RBP7.53□□□□□ -1.2
PCNX4-201ENST00000317623 AKR1B10O60218 316 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.53□□□□□ -1.2
PCNX4-201ENST00000317623 KCNG4Q8TDN1 519 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 SSH1Q8WYL5 1049 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 NACADO15069 1562 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 DDX27Q96GQ7 796 aaKnown RBP7.53□□□□□ -1.2
PCNX4-201ENST00000317623 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.53□□□□□ -1.2
PCNX4-201ENST00000317623 WDR97A6NE52 1622 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 KRT83P78385 493 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 GUCY1B3Q02153 619 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 C8orf34Q49A92 452 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 AOPEPQ8N6M6 819 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 LZTFL1Q9NQ48 299 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 CCDC40Q4G0X9 1142 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 DESP17661 470 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 CASQ2O14958 399 aaPredicted RBP7.53□□□□□ -1.2
PCNX4-201ENST00000317623 LRRC45Q96CN5 670 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 LARP6Q9BRS8 491 aaKnown RBP7.53□□□□□ -1.2
PCNX4-201ENST00000317623 EID1Q9Y6B2 187 aa7.53□□□□□ -1.2
PCNX4-201ENST00000317623 BRD3Q15059 726 aa7.52□□□□□ -1.2
PCNX4-201ENST00000317623 TSC1Q92574 1164 aa7.52□□□□□ -1.2
PCNX4-201ENST00000317623 KCNK9Q9NPC2 374 aa7.52□□□□□ -1.2
PCNX4-201ENST00000317623 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.52□□□□□ -1.2
PCNX4-201ENST00000317623 PHLDB2Q86SQ0 1253 aa7.52□□□□□ -1.2
PCNX4-201ENST00000317623 RASEFQ8IZ41 740 aa7.52□□□□□ -1.21
PCNX4-201ENST00000317623 DDX54Q8TDD1 881 aaKnown RBP7.52□□□□□ -1.21
PCNX4-201ENST00000317623 TSPYL2Q9H2G4 693 aaPredicted RBP7.52□□□□□ -1.21
PCNX4-201ENST00000317623 MINK1Q8N4C8 1332 aaPredicted RBP7.52□□□□□ -1.21
PCNX4-201ENST00000317623 SOGA3Q5TF21 947 aa7.52□□□□□ -1.21
PCNX4-201ENST00000317623 SSRP1Q08945 709 aaKnown RBP7.52□□□□□ -1.21
PCNX4-201ENST00000317623 CETN3O15182 167 aa7.52□□□□□ -1.21
PCNX4-201ENST00000317623 INTS8Q75QN2 995 aaKnown RBP7.52□□□□□ -1.21
PCNX4-201ENST00000317623 NUTM1Q86Y26 1132 aa7.52□□□□□ -1.21
PCNX4-201ENST00000317623 GBP7Q8N8V2 638 aaPredicted RBP7.52□□□□□ -1.21
PCNX4-201ENST00000317623 GNL3LQ9NVN8 582 aaKnown RBP7.52□□□□□ -1.21
PCNX4-201ENST00000317623 ZC3H6P61129 1189 aaKnown RBP7.52□□□□□ -1.21
PCNX4-201ENST00000317623 EFCAB2Q5VUJ9 269 aa7.52□□□□□ -1.21
PCNX4-201ENST00000317623 FAM114A2Q9NRY5 505 aa7.52□□□□□ -1.21
PCNX4-201ENST00000317623 HDAC1Q13547 482 aaPredicted RBP7.52□□□□□ -1.21
PCNX4-201ENST00000317623 TRIM21P19474 475 aaKnown RBP7.52□□□□□ -1.21
PCNX4-201ENST00000317623 PRKAR2BP31323 418 aa7.52□□□□□ -1.21
PCNX4-201ENST00000317623 CCDC174Q6PII3 467 aa7.52□□□□□ -1.21
PCNX4-201ENST00000317623 LMBR1Q8WVP7 490 aa7.52□□□□□ -1.21
PCNX4-201ENST00000317623 DACT1Q9NYF0 836 aa7.52□□□□□ -1.21
PCNX4-201ENST00000317623 NKIRAS1Q9NYS0 192 aa7.52□□□□□ -1.21
PCNX4-201ENST00000317623 DIXDC1Q155Q3 683 aa7.52□□□□□ -1.21
PCNX4-201ENST00000317623 RABEP2Q9H5N1 569 aa7.52□□□□□ -1.21
PCNX4-201ENST00000317623 APBB1IPQ7Z5R6 666 aaPredicted RBP7.52□□□□□ -1.21
PCNX4-201ENST00000317623 NKTRP30414 1462 aaKnown RBP7.52□□□□□ -1.21
PCNX4-201ENST00000317623 RAB11FIP4Q86YS3 637 aa7.52□□□□□ -1.21
PCNX4-201ENST00000317623 SCAPERQ9BY12 1400 aa7.52□□□□□ -1.21
PCNX4-201ENST00000317623 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.51□□□□□ -1.21
PCNX4-201ENST00000317623 FRMD3A2A2Y4 597 aa7.51□□□□□ -1.21
PCNX4-201ENST00000317623 SPATS2Q86XZ4 545 aaKnown RBP7.51□□□□□ -1.21
PCNX4-201ENST00000317623 RRBP1Q9P2E9 1410 aaKnown RBP7.51□□□□□ -1.21
PCNX4-201ENST00000317623 CTNNA2P26232 953 aa7.51□□□□□ -1.21
PCNX4-201ENST00000317623 CCT2P78371 535 aaKnown RBP7.51□□□□□ -1.21
PCNX4-201ENST00000317623 VCX3BQ9H321 246 aa7.51□□□□□ -1.21
PCNX4-201ENST00000317623 ZKSCAN8Q15776 578 aaPredicted RBP7.51□□□□□ -1.21
PCNX4-201ENST00000317623 PPFIA1Q13136 1202 aa7.51□□□□□ -1.21
PCNX4-201ENST00000317623 TRIM68Q6AZZ1 485 aa7.51□□□□□ -1.21
PCNX4-201ENST00000317623 ZMAT2Q96NC0 199 aaKnown RBP7.51□□□□□ -1.21
PCNX4-201ENST00000317623 NEK11Q8NG66 645 aa7.51□□□□□ -1.21
PCNX4-201ENST00000317623 KIF5AQ12840 1032 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms