RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 BCORQ6W2J9 1755 aa30.95■■■□□ 2.54
CDPF1-201ENST00000314567 SF3B2Q13435 895 aaKnown RBP30.93■■■□□ 2.54
CDPF1-201ENST00000314567 A0A087WZG4 1122 aa30.93■■■□□ 2.54
CDPF1-201ENST00000314567 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.93■■■□□ 2.54
CDPF1-201ENST00000314567 USPL1Q5W0Q7 1092 aa30.93■■■□□ 2.54
CDPF1-201ENST00000314567 CWC25Q9NXE8 425 aaPredicted RBP30.92■■■□□ 2.54
CDPF1-201ENST00000314567 UBN2Q6ZU65 1347 aa30.92■■■□□ 2.54
CDPF1-201ENST00000314567 TRAPPC3LQ5T215 181 aa30.91■■■□□ 2.54
CDPF1-201ENST00000314567 UBE3BQ7Z3V4 1068 aa30.91■■■□□ 2.54
CDPF1-201ENST00000314567 BCL2L12Q9HB09 334 aa30.91■■■□□ 2.54
CDPF1-201ENST00000314567 AKT1S1Q96B36 256 aa30.91■■■□□ 2.54
CDPF1-201ENST00000314567 SCN7AQ01118 1682 aa30.9■■■□□ 2.54
CDPF1-201ENST00000314567 CCDC191Q8NCU4 936 aa30.9■■■□□ 2.54
CDPF1-201ENST00000314567 SUCLG2Q96I99 432 aa30.9■■■□□ 2.54
CDPF1-201ENST00000314567 NARFQ9UHQ1 456 aa30.9■■■□□ 2.54
CDPF1-201ENST00000314567 TUBGCP6Q96RT7 1819 aa30.9■■■□□ 2.54
CDPF1-201ENST00000314567 IBTKQ9P2D0 1353 aaPredicted RBP30.9■■■□□ 2.54
CDPF1-201ENST00000314567 NLRP10Q86W26 655 aa30.89■■■□□ 2.54
CDPF1-201ENST00000314567 ZBTB47Q9UFB7 747 aaPredicted RBP30.89■■■□□ 2.54
CDPF1-201ENST00000314567 UTYO14607 1347 aa30.89■■■□□ 2.54
CDPF1-201ENST00000314567 ZNF34Q8IZ26 560 aa30.89■■■□□ 2.53
CDPF1-201ENST00000314567 KAZALD1Q96I82 304 aa30.89■■■□□ 2.53
CDPF1-201ENST00000314567 FAM177BA6PVY3 158 aa30.88■■■□□ 2.53
CDPF1-201ENST00000314567 RFC4P35249 363 aa30.88■■■□□ 2.53
CDPF1-201ENST00000314567 BAG6P46379 1132 aa30.88■■■□□ 2.53
CDPF1-201ENST00000314567 HSP90AB3PQ58FF7 597 aa30.88■■■□□ 2.53
CDPF1-201ENST00000314567 SYNE4Q8N205 404 aa30.88■■■□□ 2.53
CDPF1-201ENST00000314567 ANO8Q9HCE9 1232 aaPredicted RBP30.88■■■□□ 2.53
CDPF1-201ENST00000314567 TFCP2L1Q9NZI6 479 aa30.88■■■□□ 2.53
CDPF1-201ENST00000314567 ZPR1O75312 459 aa30.87■■■□□ 2.53
CDPF1-201ENST00000314567 ATP8B2P98198 1209 aa30.87■■■□□ 2.53
CDPF1-201ENST00000314567 CASP7P55210 303 aa30.87■■■□□ 2.53
CDPF1-201ENST00000314567 BICDL1Q6ZP65 573 aa30.87■■■□□ 2.53
CDPF1-201ENST00000314567 TRIM28Q13263 835 aaKnown RBP30.86■■■□□ 2.53
CDPF1-201ENST00000314567 EPHA10Q5JZY3 1008 aa30.86■■■□□ 2.53
CDPF1-201ENST00000314567 USP42Q9H9J4 1324 aaKnown RBP30.85■■■□□ 2.53
CDPF1-201ENST00000314567 PNMA6EA0A0J9YXQ4 647 aa30.85■■■□□ 2.53
CDPF1-201ENST00000314567 FAM89AQ96GI7 184 aa30.85■■■□□ 2.53
CDPF1-201ENST00000314567 IPO9Q96P70 1041 aaKnown RBP30.85■■■□□ 2.53
CDPF1-201ENST00000314567 NIP7Q9Y221 180 aaKnown RBP eCLIP30.85■■■□□ 2.53
CDPF1-201ENST00000314567 H7C1W4 665 aa30.84■■■□□ 2.53
CDPF1-201ENST00000314567 TBC1D9BQ66K14 1250 aa30.84■■■□□ 2.53
CDPF1-201ENST00000314567 HDAC5Q9UQL6 1122 aa30.84■■■□□ 2.53
CDPF1-201ENST00000314567 SSFA2P28290 1259 aa30.84■■■□□ 2.53
CDPF1-201ENST00000314567 BICC1Q9H694 974 aaKnown RBP30.84■■■□□ 2.53
CDPF1-201ENST00000314567 BMP2KLQ5H9B9 411 aa30.83■■■□□ 2.53
CDPF1-201ENST00000314567 SUSD4Q5VX71 490 aa30.83■■■□□ 2.53
CDPF1-201ENST00000314567 ZNF652Q9Y2D9 606 aa30.83■■■□□ 2.53
CDPF1-201ENST00000314567 ADRA2BP18089 450 aa30.82■■■□□ 2.52
CDPF1-201ENST00000314567 CLEC4GQ6UXB4 293 aa30.81■■■□□ 2.52
CDPF1-201ENST00000314567 PPP1R42Q7Z4L9 355 aa30.8■■■□□ 2.52
CDPF1-201ENST00000314567 COL23A1Q86Y22 540 aaPredicted RBP30.8■■■□□ 2.52
CDPF1-201ENST00000314567 TRMT112Q9UI30 125 aaKnown RBP30.8■■■□□ 2.52
CDPF1-201ENST00000314567 ZBTB38Q8NAP3 1195 aaPredicted RBP30.79■■■□□ 2.52
CDPF1-201ENST00000314567 MSH5O43196 834 aa30.78■■■□□ 2.52
CDPF1-201ENST00000314567 PCCAP05165 728 aaPredicted RBP30.78■■■□□ 2.52
CDPF1-201ENST00000314567 SSH3Q8TE77 659 aa30.78■■■□□ 2.52
CDPF1-201ENST00000314567 DDRGK1Q96HY6 314 aa30.78■■■□□ 2.52
CDPF1-201ENST00000314567 PNPLA7Q6ZV29 1317 aa30.77■■■□□ 2.52
CDPF1-201ENST00000314567 GYS1P13807 737 aa30.77■■■□□ 2.52
CDPF1-201ENST00000314567 UPF2Q9HAU5 1272 aaKnown RBP30.77■■■□□ 2.52
CDPF1-201ENST00000314567 SRGAP3O43295 1099 aa30.76■■■□□ 2.52
CDPF1-201ENST00000314567 NUTM1Q86Y26 1132 aa30.76■■■□□ 2.52
CDPF1-201ENST00000314567 FOXO4P98177 505 aa30.75■■■□□ 2.51
CDPF1-201ENST00000314567 SLC15A2Q16348 729 aa30.75■■■□□ 2.51
CDPF1-201ENST00000314567 PLEKHM2Q8IWE5 1019 aa30.75■■■□□ 2.51
CDPF1-201ENST00000314567 NTSR2O95665 410 aa30.74■■■□□ 2.51
CDPF1-201ENST00000314567 POLA2Q14181 598 aa30.74■■■□□ 2.51
CDPF1-201ENST00000314567 CCDC125Q86Z20 511 aa30.74■■■□□ 2.51
CDPF1-201ENST00000314567 UTP14AQ9BVJ6 771 aaKnown RBP30.74■■■□□ 2.51
CDPF1-201ENST00000314567 PARP10Q53GL7 1025 aa30.74■■■□□ 2.51
CDPF1-201ENST00000314567 UPF1Q92900 1129 aaKnown RBP eCLIP30.74■■■□□ 2.51
CDPF1-201ENST00000314567 HMGB2P26583 209 aaKnown RBP30.73■■■□□ 2.51
CDPF1-201ENST00000314567 MTX1Q13505 466 aa30.73■■■□□ 2.51
CDPF1-201ENST00000314567 NFIXQ14938 502 aa30.72■■■□□ 2.51
CDPF1-201ENST00000314567 CCDC85AQ96PX6 553 aaPredicted RBP30.72■■■□□ 2.51
CDPF1-201ENST00000314567 SETDB2Q96T68 719 aa30.72■■■□□ 2.51
CDPF1-201ENST00000314567 STK32BQ9NY57 414 aa30.72■■■□□ 2.51
CDPF1-201ENST00000314567 IRS4O14654 1257 aaPredicted RBP30.72■■■□□ 2.51
CDPF1-201ENST00000314567 SEC24BO95487 1268 aa30.72■■■□□ 2.51
CDPF1-201ENST00000314567 LMBR1LQ6UX01 489 aa30.72■■■□□ 2.51
CDPF1-201ENST00000314567 APBB1O00213 710 aa30.71■■■□□ 2.51
CDPF1-201ENST00000314567 HCLS1P14317 486 aaPredicted RBP30.71■■■□□ 2.51
CDPF1-201ENST00000314567 CCDC24Q8N4L8 307 aa30.71■■■□□ 2.51
CDPF1-201ENST00000314567 LRRCC1Q9C099 1032 aa30.71■■■□□ 2.51
CDPF1-201ENST00000314567 EXOC6BQ9Y2D4 811 aa30.71■■■□□ 2.51
CDPF1-201ENST00000314567 RGL2O15211 777 aa30.7■■■□□ 2.51
CDPF1-201ENST00000314567 COL24A1Q17RW2 1714 aa30.7■■■□□ 2.5
CDPF1-201ENST00000314567 KLHDC4Q8TBB5 520 aa30.7■■■□□ 2.5
CDPF1-201ENST00000314567 PDGFDQ9GZP0 370 aaPredicted RBP30.7■■■□□ 2.5
CDPF1-201ENST00000314567 BCL11AQ9H165 835 aa30.7■■■□□ 2.5
CDPF1-201ENST00000314567 CHMP3Q9Y3E7 222 aa30.7■■■□□ 2.5
CDPF1-201ENST00000314567 SH3TC1Q8TE82 1336 aa30.7■■■□□ 2.5
CDPF1-201ENST00000314567 CDHR2Q9BYE9 1310 aa30.69■■■□□ 2.5
CDPF1-201ENST00000314567 RAB11FIP3O75154 756 aa30.69■■■□□ 2.5
CDPF1-201ENST00000314567 RABL6Q3YEC7 729 aaPredicted RBP30.69■■■□□ 2.5
CDPF1-201ENST00000314567 ERFEQ4G0M1 354 aa30.69■■■□□ 2.5
CDPF1-201ENST00000314567 PA2G4Q9UQ80 394 aaKnown RBP30.69■■■□□ 2.5
CDPF1-201ENST00000314567 SMARCA5O60264 1052 aaPredicted RBP30.68■■■□□ 2.5
CDPF1-201ENST00000314567 TTC22Q5TAA0 569 aa30.68■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms