RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 PA2G4Q9UQ80 394 aaKnown RBP11.55□□□□□ -0.56
LSMEM1-201ENST00000312849 RBM8AQ9Y5S9 174 aaKnown RBP11.55□□□□□ -0.56
LSMEM1-201ENST00000312849 RFX7Q2KHR2 1363 aa11.55□□□□□ -0.56
LSMEM1-201ENST00000312849 AFDNP55196 1824 aaKnown RBP11.54□□□□□ -0.56
LSMEM1-201ENST00000312849 RRP9O43818 475 aaKnown RBP11.54□□□□□ -0.56
LSMEM1-201ENST00000312849 TATP17735 454 aaPredicted RBP11.54□□□□□ -0.56
LSMEM1-201ENST00000312849 KCNJ4P48050 445 aa11.54□□□□□ -0.56
LSMEM1-201ENST00000312849 CREB3L3Q68CJ9 461 aa11.54□□□□□ -0.56
LSMEM1-201ENST00000312849 ZNF790Q6PG37 636 aa11.54□□□□□ -0.56
LSMEM1-201ENST00000312849 KAZALD1Q96I82 304 aa11.54□□□□□ -0.56
LSMEM1-201ENST00000312849 SLC52A2Q9HAB3 445 aa11.54□□□□□ -0.56
LSMEM1-201ENST00000312849 ERBB3P21860 1342 aa11.54□□□□□ -0.56
LSMEM1-201ENST00000312849 GJB2P29033 226 aa11.53□□□□□ -0.56
LSMEM1-201ENST00000312849 NMIQ13287 307 aaPredicted RBP11.53□□□□□ -0.56
LSMEM1-201ENST00000312849 TSGA10IPQ3SY00 556 aa11.53□□□□□ -0.56
LSMEM1-201ENST00000312849 EAF2Q96CJ1 260 aaPredicted RBP11.53□□□□□ -0.56
LSMEM1-201ENST00000312849 METTL22Q9BUU2 404 aaPredicted RBP11.53□□□□□ -0.56
LSMEM1-201ENST00000312849 CNPY2Q9Y2B0 182 aa11.53□□□□□ -0.56
LSMEM1-201ENST00000312849 C1orf167Q5SNV9 1468 aa11.53□□□□□ -0.56
LSMEM1-201ENST00000312849 JCADQ9P266 1359 aa11.53□□□□□ -0.56
LSMEM1-201ENST00000312849 NEURL1BA8MQ27 555 aa11.53□□□□□ -0.56
LSMEM1-201ENST00000312849 GCKRQ14397 625 aa11.53□□□□□ -0.56
LSMEM1-201ENST00000312849 LMOD2Q6P5Q4 547 aa11.53□□□□□ -0.56
LSMEM1-201ENST00000312849 TICAM2Q86XR7 235 aa11.53□□□□□ -0.56
LSMEM1-201ENST00000312849 CCDC83Q8IWF9 413 aa11.53□□□□□ -0.56
LSMEM1-201ENST00000312849 RBM33Q96EV2 1170 aaKnown RBP11.53□□□□□ -0.56
LSMEM1-201ENST00000312849 GDPD2Q9HCC8 539 aa11.53□□□□□ -0.56
LSMEM1-201ENST00000312849 MTMR6Q9Y217 621 aa11.53□□□□□ -0.56
LSMEM1-201ENST00000312849 NPHP3Q7Z494 1330 aa11.52□□□□□ -0.56
LSMEM1-201ENST00000312849 COL18A1P39060 1754 aa11.52□□□□□ -0.56
LSMEM1-201ENST00000312849 MED23Q9ULK4 1368 aa11.52□□□□□ -0.57
LSMEM1-201ENST00000312849 SLC27A2O14975 620 aa11.52□□□□□ -0.57
LSMEM1-201ENST00000312849 IGKV5-2P06315 115 aa11.52□□□□□ -0.57
LSMEM1-201ENST00000312849 AIMP1Q12904 312 aaKnown RBP11.52□□□□□ -0.57
LSMEM1-201ENST00000312849 KRT32Q14532 448 aa11.52□□□□□ -0.57
LSMEM1-201ENST00000312849 ADCK5Q3MIX3 580 aa11.52□□□□□ -0.57
LSMEM1-201ENST00000312849 FSD1Q9BTV5 496 aa11.52□□□□□ -0.57
LSMEM1-201ENST00000312849 COPRSQ9NQ92 184 aa11.52□□□□□ -0.57
LSMEM1-201ENST00000312849 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.52□□□□□ -0.57
LSMEM1-201ENST00000312849 AXIN2Q9Y2T1 843 aa11.52□□□□□ -0.57
LSMEM1-201ENST00000312849 LAMB4A4D0S4 1761 aa11.52□□□□□ -0.57
LSMEM1-201ENST00000312849 PKD1L3Q7Z443 1732 aa11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 LARGE1O95461 756 aa11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 PTMAP06454 111 aaKnown RBP11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 BLOC1S2Q6QNY1 142 aa11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 IFNL2Q8IZJ0 200 aa11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 RNF214Q8ND24 703 aa11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 XAGE3Q8WTP9 111 aa11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 KDM6AO15550 1401 aaPredicted RBP11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 ARFGEF2Q9Y6D5 1785 aa11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 PRAMEF22A3QJZ6 481 aa11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 SNRPA1P09661 255 aaKnown RBP11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 CPA1P15085 419 aa11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 PHKG2P15735 406 aa11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 ATP5JP18859 108 aa11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 XPCQ01831 940 aaPredicted RBP11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 FOXD4L6Q3SYB3 417 aaPredicted RBP11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 FOXD4L3Q6VB84 417 aaPredicted RBP11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 PROSER2Q86WR7 435 aaPredicted RBP11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 CCDC8Q9H0W5 538 aaPredicted RBP11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 C19orf44Q9H6X5 657 aa11.51□□□□□ -0.57
LSMEM1-201ENST00000312849 PARP4Q9UKK3 1724 aaKnown RBP11.5□□□□□ -0.57
LSMEM1-201ENST00000312849 RPS6KB1P23443 525 aa11.5□□□□□ -0.57
LSMEM1-201ENST00000312849 ME3Q16798 604 aa11.5□□□□□ -0.57
LSMEM1-201ENST00000312849 ANKRD13DQ6ZTN6 518 aa11.5□□□□□ -0.57
LSMEM1-201ENST00000312849 DCAF5Q96JK2 942 aa11.5□□□□□ -0.57
LSMEM1-201ENST00000312849 FAM227BQ96M60 508 aa11.5□□□□□ -0.57
LSMEM1-201ENST00000312849 ELP1O95163 1332 aa11.5□□□□□ -0.57
LSMEM1-201ENST00000312849 FIBPO43427 364 aa11.49□□□□□ -0.57
LSMEM1-201ENST00000312849 KRT85P78386 507 aa11.49□□□□□ -0.57
LSMEM1-201ENST00000312849 HSP90AA2PQ14568 343 aaPredicted RBP11.49□□□□□ -0.57
LSMEM1-201ENST00000312849 RABL6Q3YEC7 729 aaPredicted RBP11.49□□□□□ -0.57
LSMEM1-201ENST00000312849 USPL1Q5W0Q7 1092 aa11.49□□□□□ -0.57
LSMEM1-201ENST00000312849 LARP1BQ659C4 914 aaKnown RBP11.49□□□□□ -0.57
LSMEM1-201ENST00000312849 COPS6Q7L5N1 327 aa11.49□□□□□ -0.57
LSMEM1-201ENST00000312849 FMNL2Q96PY5 1086 aa11.49□□□□□ -0.57
LSMEM1-201ENST00000312849 MYD88Q99836 296 aa11.49□□□□□ -0.57
LSMEM1-201ENST00000312849 BOLA2Q9H3K6 86 aa11.49□□□□□ -0.57
LSMEM1-201ENST00000312849 NLRP2Q9NX02 1062 aa11.49□□□□□ -0.57
LSMEM1-201ENST00000312849 TPCN1Q9ULQ1 816 aa11.49□□□□□ -0.57
LSMEM1-201ENST00000312849 A0A0D9SFI3 127 aa11.49□□□□□ -0.57
LSMEM1-201ENST00000312849 TTC5Q8N0Z6 440 aa11.49□□□□□ -0.57
LSMEM1-201ENST00000312849 LARP6Q9BRS8 491 aaKnown RBP11.49□□□□□ -0.57
LSMEM1-201ENST00000312849 U3KPZ7 1027 aaPredicted RBP11.49□□□□□ -0.57
LSMEM1-201ENST00000312849 DCCP43146 1447 aa11.48□□□□□ -0.57
LSMEM1-201ENST00000312849 VPS37CA5D8V6 355 aaPredicted RBP11.48□□□□□ -0.57
LSMEM1-201ENST00000312849 TPM3P06753 285 aa11.48□□□□□ -0.57
LSMEM1-201ENST00000312849 MYL6BP14649 208 aa11.48□□□□□ -0.57
LSMEM1-201ENST00000312849 DNM1Q05193 864 aaKnown RBP11.48□□□□□ -0.57
LSMEM1-201ENST00000312849 KIAA2012Q0VF49 1180 aa11.48□□□□□ -0.57
LSMEM1-201ENST00000312849 NFATC2IPQ8NCF5 419 aa11.48□□□□□ -0.57
LSMEM1-201ENST00000312849 SIL1Q9H173 461 aa11.48□□□□□ -0.57
LSMEM1-201ENST00000312849 TAF5LO75529 589 aa11.47□□□□□ -0.57
LSMEM1-201ENST00000312849 RFX5P48382 616 aaPredicted RBP11.47□□□□□ -0.57
LSMEM1-201ENST00000312849 ZC3H6P61129 1189 aaKnown RBP11.47□□□□□ -0.57
LSMEM1-201ENST00000312849 ST3GAL1Q11201 340 aa11.47□□□□□ -0.57
LSMEM1-201ENST00000312849 SLC39A6Q13433 755 aa11.47□□□□□ -0.57
LSMEM1-201ENST00000312849 GLIPR1L2Q4G1C9 344 aa11.47□□□□□ -0.57
LSMEM1-201ENST00000312849 TNNI3KQ59H18 835 aa11.47□□□□□ -0.57
LSMEM1-201ENST00000312849 ZNF496Q96IT1 587 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms