RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 CCDC94Q9BW85 323 aaPredicted RBP10.18□□□□□ -0.78
COL6A5-202ENST00000312481 TOP1P11387 765 aaKnown RBP10.18□□□□□ -0.78
COL6A5-202ENST00000312481 CASQ1P31415 396 aa10.18□□□□□ -0.78
COL6A5-202ENST00000312481 CLTCL1P53675 1640 aa10.17□□□□□ -0.78
COL6A5-202ENST00000312481 ANKS4BQ8N8V4 417 aa10.17□□□□□ -0.78
COL6A5-202ENST00000312481 TAF4BQ92750 862 aa10.17□□□□□ -0.78
COL6A5-202ENST00000312481 JAKMIP2Q96AA8 810 aa10.17□□□□□ -0.78
COL6A5-202ENST00000312481 UBAC1Q9BSL1 405 aa10.17□□□□□ -0.78
COL6A5-202ENST00000312481 USH1CQ9Y6N9 552 aa10.17□□□□□ -0.78
COL6A5-202ENST00000312481 PLA2R1Q13018 1463 aa10.17□□□□□ -0.78
COL6A5-202ENST00000312481 PPLO60437 1756 aa10.17□□□□□ -0.78
COL6A5-202ENST00000312481 STARD3NLO95772 234 aa10.17□□□□□ -0.78
COL6A5-202ENST00000312481 ZGPATQ8N5A5 531 aaKnown RBP10.17□□□□□ -0.78
COL6A5-202ENST00000312481 A2ML1A8K2U0 1454 aa10.17□□□□□ -0.78
COL6A5-202ENST00000312481 MKRN1Q9UHC7 482 aaKnown RBP10.17□□□□□ -0.78
COL6A5-202ENST00000312481 MADDQ8WXG6 1647 aa10.17□□□□□ -0.78
COL6A5-202ENST00000312481 WASHC4Q2M389 1173 aa10.17□□□□□ -0.78
COL6A5-202ENST00000312481 NOS1P29475 1434 aa10.17□□□□□ -0.78
COL6A5-202ENST00000312481 GON4LQ3T8J9 2241 aa10.17□□□□□ -0.78
COL6A5-202ENST00000312481 NLRP6P59044 892 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 SIRT1Q96EB6 747 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 CDCA7LQ96GN5 454 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 PLCD4Q9BRC7 762 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 HDAC9Q9UKV0 1011 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 OPA1O60313 960 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 ZSCAN22P10073 491 aaPredicted RBP10.16□□□□□ -0.78
COL6A5-202ENST00000312481 TMEM266Q2M3C6 531 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 C8orf76Q96K31 380 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 CLIP2Q9UDT6 1046 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 PLEKHG1Q9ULL1 1385 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 C10orf67Q8IYJ2 551 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 NSRP1Q9H0G5 558 aaKnown RBP10.16□□□□□ -0.78
COL6A5-202ENST00000312481 PPFIA3O75145 1194 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 TBC1D9Q6ZT07 1266 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 ABTB2Q8N961 1025 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 DCTPP1Q9H773 170 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 TM6SF1Q9BZW5 370 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 CALM1P0DP23 149 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 CALM2P0DP24 149 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 CALM3P0DP25 149 aa10.16□□□□□ -0.78
COL6A5-202ENST00000312481 IGSF3O75054 1194 aa10.15□□□□□ -0.78
COL6A5-202ENST00000312481 CALML3P27482 149 aa10.15□□□□□ -0.78
COL6A5-202ENST00000312481 EVA1CP58658 441 aa10.15□□□□□ -0.78
COL6A5-202ENST00000312481 B4GALNT4Q76KP1 1039 aa10.15□□□□□ -0.78
COL6A5-202ENST00000312481 NAP1L4Q99733 375 aaKnown RBP10.15□□□□□ -0.78
COL6A5-202ENST00000312481 ATP8B1O43520 1251 aa10.15□□□□□ -0.78
COL6A5-202ENST00000312481 IQCA1Q86XH1 822 aa10.15□□□□□ -0.78
COL6A5-202ENST00000312481 RGS22Q8NE09 1264 aa10.15□□□□□ -0.78
COL6A5-202ENST00000312481 NAP1L3Q99457 506 aaPredicted RBP10.15□□□□□ -0.78
COL6A5-202ENST00000312481 CDK12Q9NYV4 1490 aaPredicted RBP10.15□□□□□ -0.78
COL6A5-202ENST00000312481 KRT23Q9C075 422 aa10.15□□□□□ -0.78
COL6A5-202ENST00000312481 DISP3Q9P2K9 1392 aa10.15□□□□□ -0.78
COL6A5-202ENST00000312481 NAP1L1P55209 391 aaKnown RBP10.15□□□□□ -0.78
COL6A5-202ENST00000312481 KRT83P78385 493 aa10.15□□□□□ -0.78
COL6A5-202ENST00000312481 TTC39AQ5SRH9 613 aa10.15□□□□□ -0.78
COL6A5-202ENST00000312481 SYCE3A1L190 88 aa10.15□□□□□ -0.78
COL6A5-202ENST00000312481 ZNF165P49910 485 aa10.15□□□□□ -0.78
COL6A5-202ENST00000312481 SMC1AQ14683 1233 aaKnown RBP10.15□□□□□ -0.78
COL6A5-202ENST00000312481 SEPT7Q16181 437 aaKnown RBP10.15□□□□□ -0.79
COL6A5-202ENST00000312481 CNGA4Q8IV77 575 aa10.15□□□□□ -0.79
COL6A5-202ENST00000312481 WASLO00401 505 aaPredicted RBP10.14□□□□□ -0.79
COL6A5-202ENST00000312481 CFAP100Q494V2 611 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 SPTY2D1Q68D10 685 aaPredicted RBP10.14□□□□□ -0.79
COL6A5-202ENST00000312481 RBM33Q96EV2 1170 aaKnown RBP10.14□□□□□ -0.79
COL6A5-202ENST00000312481 SWAP70Q9UH65 585 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 GBP1P32455 592 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 OGFRQ9NZT2 677 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 KDM2BQ8NHM5 1336 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 NUCKS1Q9H1E3 243 aaKnown RBP10.14□□□□□ -0.79
COL6A5-202ENST00000312481 TNIP1Q15025 636 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 KIAA1328Q86T90 577 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 PDILTQ8N807 584 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 CARMIL3Q8ND23 1372 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 BICDL2A1A5D9 508 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 MAP3K12Q12852 859 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 SNW1Q13573 536 aaKnown RBP10.14□□□□□ -0.79
COL6A5-202ENST00000312481 LMBR1Q8WVP7 490 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 FBXO3Q9UK99 471 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 BCAR3O75815 825 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 USP5P45974 858 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 SOGA3Q5TF21 947 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 JAKMIP1Q96N16 626 aaKnown RBP10.14□□□□□ -0.79
COL6A5-202ENST00000312481 TSKSQ9UJT2 592 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 CTDP1Q9Y5B0 961 aaPredicted RBP10.14□□□□□ -0.79
COL6A5-202ENST00000312481 CCDC102BQ68D86 513 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 AATKQ6ZMQ8 1374 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 PDE6BP35913 854 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 WWC2Q6AWC2 1192 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 BICDL1Q6ZP65 573 aa10.14□□□□□ -0.79
COL6A5-202ENST00000312481 MYO3AQ8NEV4 1616 aa10.13□□□□□ -0.79
COL6A5-202ENST00000312481 AACSQ86V21 672 aa10.13□□□□□ -0.79
COL6A5-202ENST00000312481 SLC12A5Q9H2X9 1139 aa10.13□□□□□ -0.79
COL6A5-202ENST00000312481 NBPF7P0C2Y1 421 aaPredicted RBP10.13□□□□□ -0.79
COL6A5-202ENST00000312481 AIMP1Q12904 312 aaKnown RBP10.13□□□□□ -0.79
COL6A5-202ENST00000312481 SULT6B1Q6IMI4 303 aa10.13□□□□□ -0.79
COL6A5-202ENST00000312481 CYLC1P35663 651 aaPredicted RBP10.13□□□□□ -0.79
COL6A5-202ENST00000312481 TACO1Q9BSH4 297 aaKnown RBP10.13□□□□□ -0.79
COL6A5-202ENST00000312481 SREK1Q8WXA9 508 aaKnown RBP10.13□□□□□ -0.79
COL6A5-202ENST00000312481 FERMT1Q9BQL6 677 aa10.13□□□□□ -0.79
COL6A5-202ENST00000312481 CABP2Q9NPB3 220 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms