RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 HLFQ16534 295 aa20.53■□□□□ 0.88
CLCF1-201ENST00000312438 SASH1O94885 1247 aa20.53■□□□□ 0.88
CLCF1-201ENST00000312438 PCCAP05165 728 aaPredicted RBP20.53■□□□□ 0.88
CLCF1-201ENST00000312438 PTPN12Q05209 780 aaKnown RBP20.53■□□□□ 0.88
CLCF1-201ENST00000312438 ZBTB38Q8NAP3 1195 aaPredicted RBP20.53■□□□□ 0.88
CLCF1-201ENST00000312438 RTL5Q5HYW3 569 aaPredicted RBP20.52■□□□□ 0.88
CLCF1-201ENST00000312438 TSHZ3Q63HK5 1081 aa20.52■□□□□ 0.88
CLCF1-201ENST00000312438 TBC1D2BQ9UPU7 963 aa20.52■□□□□ 0.88
CLCF1-201ENST00000312438 ATRNO75882 1429 aa20.52■□□□□ 0.87
CLCF1-201ENST00000312438 KAT6BQ8WYB5 2073 aa20.52■□□□□ 0.87
CLCF1-201ENST00000312438 SIL1Q9H173 461 aa20.51■□□□□ 0.87
CLCF1-201ENST00000312438 TTC41PQ6P2S7 1318 aa20.51■□□□□ 0.87
CLCF1-201ENST00000312438 USP42Q9H9J4 1324 aaKnown RBP20.51■□□□□ 0.87
CLCF1-201ENST00000312438 NUP188Q5SRE5 1749 aa20.51■□□□□ 0.87
CLCF1-201ENST00000312438 IFIT2P09913 472 aaKnown RBP20.5■□□□□ 0.87
CLCF1-201ENST00000312438 KLHDC4Q8TBB5 520 aa20.5■□□□□ 0.87
CLCF1-201ENST00000312438 QTRT2Q9H974 415 aaKnown RBP20.5■□□□□ 0.87
CLCF1-201ENST00000312438 RBM25P49756 843 aaKnown RBP20.5■□□□□ 0.87
CLCF1-201ENST00000312438 NLRP10Q86W26 655 aa20.5■□□□□ 0.87
CLCF1-201ENST00000312438 DAXXQ9UER7 740 aaPredicted RBP20.5■□□□□ 0.87
CLCF1-201ENST00000312438 TRIM6-TRIM34B2RNG4 842 aa20.49■□□□□ 0.87
CLCF1-201ENST00000312438 ERICH6Q7L0X2 663 aa20.49■□□□□ 0.87
CLCF1-201ENST00000312438 SEPT12Q8IYM1 358 aa20.49■□□□□ 0.87
CLCF1-201ENST00000312438 PI4K2BQ8TCG2 481 aa20.49■□□□□ 0.87
CLCF1-201ENST00000312438 GPATCH3Q96I76 525 aa20.49■□□□□ 0.87
CLCF1-201ENST00000312438 PLA2G12BQ9BX93 195 aa20.49■□□□□ 0.87
CLCF1-201ENST00000312438 CHMP3Q9Y3E7 222 aa20.49■□□□□ 0.87
CLCF1-201ENST00000312438 TJP1Q07157 1748 aa20.49■□□□□ 0.87
CLCF1-201ENST00000312438 THSD7AQ9UPZ6 1657 aa20.48■□□□□ 0.87
CLCF1-201ENST00000312438 ERC2O15083 957 aa20.48■□□□□ 0.87
CLCF1-201ENST00000312438 AACSQ86V21 672 aa20.48■□□□□ 0.87
CLCF1-201ENST00000312438 GLRX3O76003 335 aaKnown RBP20.48■□□□□ 0.87
CLCF1-201ENST00000312438 ZNF34Q8IZ26 560 aa20.48■□□□□ 0.87
CLCF1-201ENST00000312438 RILPL2Q969X0 211 aa20.48■□□□□ 0.87
CLCF1-201ENST00000312438 FAM89AQ96GI7 184 aa20.48■□□□□ 0.87
CLCF1-201ENST00000312438 ECHDC1Q9NTX5 307 aa20.48■□□□□ 0.87
CLCF1-201ENST00000312438 CDHR2Q9BYE9 1310 aa20.47■□□□□ 0.87
CLCF1-201ENST00000312438 AFDNP55196 1824 aaKnown RBP20.47■□□□□ 0.87
CLCF1-201ENST00000312438 GPTP24298 496 aa20.47■□□□□ 0.87
CLCF1-201ENST00000312438 EAF2Q96CJ1 260 aaPredicted RBP20.47■□□□□ 0.87
CLCF1-201ENST00000312438 PTF1AQ7RTS3 328 aa20.46■□□□□ 0.87
CLCF1-201ENST00000312438 FAM182BQ5T319 152 aa20.46■□□□□ 0.87
CLCF1-201ENST00000312438 CSF1RP07333 972 aa20.45■□□□□ 0.86
CLCF1-201ENST00000312438 BECN1Q14457 450 aa20.45■□□□□ 0.86
CLCF1-201ENST00000312438 CCDC57Q2TAC2 916 aa20.44■□□□□ 0.86
CLCF1-201ENST00000312438 LINC00116Q8NCU8 138 aa20.44■□□□□ 0.86
CLCF1-201ENST00000312438 TRMT112Q9UI30 125 aaKnown RBP20.44■□□□□ 0.86
CLCF1-201ENST00000312438 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.44■□□□□ 0.86
CLCF1-201ENST00000312438 CICQ96RK0 1608 aaPredicted RBP20.44■□□□□ 0.86
CLCF1-201ENST00000312438 CAMTA2O94983 1202 aa20.43■□□□□ 0.86
CLCF1-201ENST00000312438 REC8O95072 547 aa20.43■□□□□ 0.86
CLCF1-201ENST00000312438 CNTROBQ8N137 903 aa20.43■□□□□ 0.86
CLCF1-201ENST00000312438 CCDC8Q9H0W5 538 aaPredicted RBP20.43■□□□□ 0.86
CLCF1-201ENST00000312438 CHMLP26374 656 aa20.43■□□□□ 0.86
CLCF1-201ENST00000312438 TFCP2Q12800 502 aa20.43■□□□□ 0.86
CLCF1-201ENST00000312438 RC3H1Q5TC82 1133 aaKnown RBP20.43■□□□□ 0.86
CLCF1-201ENST00000312438 FBXO3Q9UK99 471 aa20.43■□□□□ 0.86
CLCF1-201ENST00000312438 CNTNAP4Q9C0A0 1308 aa20.42■□□□□ 0.86
CLCF1-201ENST00000312438 CIAO1O76071 339 aa20.42■□□□□ 0.86
CLCF1-201ENST00000312438 IL15P40933 162 aaPredicted RBP20.42■□□□□ 0.86
CLCF1-201ENST00000312438 USP26Q9BXU7 913 aa20.42■□□□□ 0.86
CLCF1-201ENST00000312438 EYA2O00167 538 aa20.41■□□□□ 0.86
CLCF1-201ENST00000312438 IRS4O14654 1257 aaPredicted RBP20.41■□□□□ 0.86
CLCF1-201ENST00000312438 PARP10Q53GL7 1025 aa20.41■□□□□ 0.86
CLCF1-201ENST00000312438 TNNI3KQ59H18 835 aa20.41■□□□□ 0.86
CLCF1-201ENST00000312438 FPGT-TNNI3KV9GXZ4 949 aa20.41■□□□□ 0.86
CLCF1-201ENST00000312438 CLEC4GQ6UXB4 293 aa20.41■□□□□ 0.86
CLCF1-201ENST00000312438 ATG9AQ7Z3C6 839 aa20.41■□□□□ 0.86
CLCF1-201ENST00000312438 ZNF652Q9Y2D9 606 aa20.41■□□□□ 0.86
CLCF1-201ENST00000312438 UBN2Q6ZU65 1347 aa20.4■□□□□ 0.86
CLCF1-201ENST00000312438 SLC4A3P48751 1232 aa20.4■□□□□ 0.86
CLCF1-201ENST00000312438 SYNE4Q8N205 404 aa20.4■□□□□ 0.86
CLCF1-201ENST00000312438 AK7Q96M32 723 aa20.4■□□□□ 0.86
CLCF1-201ENST00000312438 GPR108Q9NPR9 543 aa20.4■□□□□ 0.86
CLCF1-201ENST00000312438 ZNF831Q5JPB2 1677 aa20.39■□□□□ 0.86
CLCF1-201ENST00000312438 RGL2O15211 777 aa20.39■□□□□ 0.86
CLCF1-201ENST00000312438 PDE8AO60658 829 aa20.39■□□□□ 0.86
CLCF1-201ENST00000312438 MAP4K4O95819 1239 aaPredicted RBP20.39■□□□□ 0.86
CLCF1-201ENST00000312438 KCNQ4P56696 695 aa20.39■□□□□ 0.86
CLCF1-201ENST00000312438 IFIT5Q13325 482 aaKnown RBP20.39■□□□□ 0.86
CLCF1-201ENST00000312438 TTLL11Q8NHH1 800 aa20.39■□□□□ 0.86
CLCF1-201ENST00000312438 ESYT1Q9BSJ8 1104 aa20.39■□□□□ 0.86
CLCF1-201ENST00000312438 BCL11BQ9C0K0 894 aaPredicted RBP20.39■□□□□ 0.86
CLCF1-201ENST00000312438 CCNL1Q9UK58 526 aaPredicted RBP20.39■□□□□ 0.86
CLCF1-201ENST00000312438 SUSD4Q5VX71 490 aa20.39■□□□□ 0.85
CLCF1-201ENST00000312438 ZNF594Q96JF6 807 aaPredicted RBP20.39■□□□□ 0.85
CLCF1-201ENST00000312438 UTP14AQ9BVJ6 771 aaKnown RBP20.39■□□□□ 0.85
CLCF1-201ENST00000312438 RPS6KA4O75676 772 aa20.38■□□□□ 0.85
CLCF1-201ENST00000312438 CTSWP56202 376 aa20.38■□□□□ 0.85
CLCF1-201ENST00000312438 EVI5LQ96CN4 794 aa20.38■□□□□ 0.85
CLCF1-201ENST00000312438 TLR7Q9NYK1 1049 aaKnown RBP20.38■□□□□ 0.85
CLCF1-201ENST00000312438 RREB1Q92766 1687 aa20.38■□□□□ 0.85
CLCF1-201ENST00000312438 LRRC24Q50LG9 513 aa20.37■□□□□ 0.85
CLCF1-201ENST00000312438 SH3TC1Q8TE82 1336 aa20.37■□□□□ 0.85
CLCF1-201ENST00000312438 HSP90B1P14625 803 aaKnown RBP20.37■□□□□ 0.85
CLCF1-201ENST00000312438 TAF7LQ5H9L4 462 aa20.37■□□□□ 0.85
CLCF1-201ENST00000312438 FAM196AQ6ZSG2 479 aa20.37■□□□□ 0.85
CLCF1-201ENST00000312438 NIP7Q9Y221 180 aaKnown RBP eCLIP20.37■□□□□ 0.85
CLCF1-201ENST00000312438 ATP5JP18859 108 aa20.36■□□□□ 0.85
CLCF1-201ENST00000312438 KIF2CQ99661 725 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms