RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 TMC6Q7Z403 805 aa17.68■□□□□ 0.42
HCFC1-201ENST00000310441 SPTY2D1Q68D10 685 aaPredicted RBP17.68■□□□□ 0.42
HCFC1-201ENST00000310441 ATP5DP30049 168 aa17.68■□□□□ 0.42
HCFC1-201ENST00000310441 IFIT5Q13325 482 aaKnown RBP17.68■□□□□ 0.42
HCFC1-201ENST00000310441 UBA7P41226 1012 aa17.67■□□□□ 0.42
HCFC1-201ENST00000310441 SETD1BQ9UPS6 1966 aaKnown RBP17.67■□□□□ 0.42
HCFC1-201ENST00000310441 DNAJC21Q5F1R6 531 aaKnown RBP17.67■□□□□ 0.42
HCFC1-201ENST00000310441 SNX16P57768 344 aa17.67■□□□□ 0.42
HCFC1-201ENST00000310441 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
HCFC1-201ENST00000310441 HYPKQ9NX55 129 aa17.67■□□□□ 0.42
HCFC1-201ENST00000310441 BCAR3O75815 825 aa17.67■□□□□ 0.42
HCFC1-201ENST00000310441 BAG3O95817 575 aa17.67■□□□□ 0.42
HCFC1-201ENST00000310441 NLRP5P59047 1200 aa17.67■□□□□ 0.42
HCFC1-201ENST00000310441 ERCC6LQ2NKX8 1250 aa17.67■□□□□ 0.42
HCFC1-201ENST00000310441 AMOTQ4VCS5 1084 aa17.67■□□□□ 0.42
HCFC1-201ENST00000310441 CCDC160A6NGH7 325 aa17.67■□□□□ 0.42
HCFC1-201ENST00000310441 SETSIPP0DME0 302 aa17.67■□□□□ 0.42
HCFC1-201ENST00000310441 KIF5AQ12840 1032 aa17.67■□□□□ 0.42
HCFC1-201ENST00000310441 CCDC102BQ68D86 513 aa17.67■□□□□ 0.42
HCFC1-201ENST00000310441 FSIP1Q8NA03 581 aa17.67■□□□□ 0.42
HCFC1-201ENST00000310441 CCDC121Q6ZUS5 278 aa17.67■□□□□ 0.42
HCFC1-201ENST00000310441 ZBTB16Q05516 673 aa17.66■□□□□ 0.42
HCFC1-201ENST00000310441 SMC1BQ8NDV3 1235 aa17.66■□□□□ 0.42
HCFC1-201ENST00000310441 EVI5LQ96CN4 794 aa17.66■□□□□ 0.42
HCFC1-201ENST00000310441 GAS8O95995 478 aa17.66■□□□□ 0.42
HCFC1-201ENST00000310441 TCERG1LQ5VWI1 586 aa17.66■□□□□ 0.42
HCFC1-201ENST00000310441 RSRC1Q96IZ7 334 aaKnown RBP17.66■□□□□ 0.42
HCFC1-201ENST00000310441 PRAM1Q96QH2 718 aa17.66■□□□□ 0.42
HCFC1-201ENST00000310441 CCDC129Q6ZRS4 1044 aa17.66■□□□□ 0.42
HCFC1-201ENST00000310441 TSR2Q969E8 191 aaKnown RBP17.66■□□□□ 0.42
HCFC1-201ENST00000310441 MINDY4BA8MYZ0 360 aa17.66■□□□□ 0.42
HCFC1-201ENST00000310441 NFE2L2Q16236 605 aa17.66■□□□□ 0.42
HCFC1-201ENST00000310441 ADCY5O95622 1261 aa17.65■□□□□ 0.42
HCFC1-201ENST00000310441 ARID4AP29374 1257 aaPredicted RBP17.65■□□□□ 0.42
HCFC1-201ENST00000310441 CDK19Q9BWU1 502 aa17.65■□□□□ 0.42
HCFC1-201ENST00000310441 TACC1O75410 805 aa17.65■□□□□ 0.42
HCFC1-201ENST00000310441 PTPN23Q9H3S7 1636 aa17.65■□□□□ 0.42
HCFC1-201ENST00000310441 KCNG4Q8TDN1 519 aa17.65■□□□□ 0.42
HCFC1-201ENST00000310441 PRC1O43663 620 aa17.65■□□□□ 0.42
HCFC1-201ENST00000310441 NBPF7P0C2Y1 421 aaPredicted RBP17.65■□□□□ 0.42
HCFC1-201ENST00000310441 PUS7Q96PZ0 661 aaKnown RBP17.65■□□□□ 0.42
HCFC1-201ENST00000310441 NDC80O14777 642 aa17.64■□□□□ 0.42
HCFC1-201ENST00000310441 IMPG2Q9BZV3 1241 aa17.64■□□□□ 0.42
HCFC1-201ENST00000310441 TXNDC16Q9P2K2 825 aa17.64■□□□□ 0.42
HCFC1-201ENST00000310441 FAM184BQ9ULE4 1060 aa17.64■□□□□ 0.42
HCFC1-201ENST00000310441 CPSF2Q9P2I0 782 aaKnown RBP17.64■□□□□ 0.41
HCFC1-201ENST00000310441 IFT74Q96LB3 600 aa17.64■□□□□ 0.41
HCFC1-201ENST00000310441 KRT83P78385 493 aa17.64■□□□□ 0.41
HCFC1-201ENST00000310441 PSMC4P43686 418 aa17.64■□□□□ 0.41
HCFC1-201ENST00000310441 GABPB2Q8TAK5 448 aaPredicted RBP17.64■□□□□ 0.41
HCFC1-201ENST00000310441 ZNF165P49910 485 aa17.64■□□□□ 0.41
HCFC1-201ENST00000310441 EBAG9O00559 213 aa17.63■□□□□ 0.41
HCFC1-201ENST00000310441 RGS22Q8NE09 1264 aa17.63■□□□□ 0.41
HCFC1-201ENST00000310441 HLA-DOAP06340 250 aa17.63■□□□□ 0.41
HCFC1-201ENST00000310441 SETDB1Q15047 1291 aa17.63■□□□□ 0.41
HCFC1-201ENST00000310441 LRSAM1Q6UWE0 723 aa17.63■□□□□ 0.41
HCFC1-201ENST00000310441 CAMSAP2Q08AD1 1489 aa17.63■□□□□ 0.41
HCFC1-201ENST00000310441 CTAGE15A4D2H0 777 aa17.63■□□□□ 0.41
HCFC1-201ENST00000310441 KRT86O43790 486 aa17.63■□□□□ 0.41
HCFC1-201ENST00000310441 CTAGE8P0CG41 777 aa17.63■□□□□ 0.41
HCFC1-201ENST00000310441 CTAGE6Q86UF2 777 aa17.63■□□□□ 0.41
HCFC1-201ENST00000310441 CTAGE4Q8IX94 777 aa17.63■□□□□ 0.41
HCFC1-201ENST00000310441 TMTC2Q8N394 836 aa17.63■□□□□ 0.41
HCFC1-201ENST00000310441 ARFGAP2Q8N6H7 521 aa17.63■□□□□ 0.41
HCFC1-201ENST00000310441 DNA2P51530 1060 aa17.63■□□□□ 0.41
HCFC1-201ENST00000310441 GNG11P61952 73 aa17.63■□□□□ 0.41
HCFC1-201ENST00000310441 B4DLN1 442 aa17.63■□□□□ 0.41
HCFC1-201ENST00000310441 MRPL12P52815 198 aaKnown RBP17.63■□□□□ 0.41
HCFC1-201ENST00000310441 RANBP6O60518 1105 aaKnown RBP17.62■□□□□ 0.41
HCFC1-201ENST00000310441 GSTO1P78417 241 aa17.62■□□□□ 0.41
HCFC1-201ENST00000310441 CFAP58Q5T655 872 aa17.62■□□□□ 0.41
HCFC1-201ENST00000310441 PRPF40BQ6NWY9 871 aaKnown RBP17.62■□□□□ 0.41
HCFC1-201ENST00000310441 CWC25Q9NXE8 425 aaPredicted RBP17.62■□□□□ 0.41
HCFC1-201ENST00000310441 IFIT3O14879 490 aaKnown RBP17.62■□□□□ 0.41
HCFC1-201ENST00000310441 ARL1P40616 181 aaPredicted RBP17.62■□□□□ 0.41
HCFC1-201ENST00000310441 GOLGA1Q92805 767 aa17.62■□□□□ 0.41
HCFC1-201ENST00000310441 AKR1B10O60218 316 aa17.62■□□□□ 0.41
HCFC1-201ENST00000310441 CCDC82Q8N4S0 544 aa17.62■□□□□ 0.41
HCFC1-201ENST00000310441 MPNDQ8N594 471 aa17.62■□□□□ 0.41
HCFC1-201ENST00000310441 BICD1Q96G01 975 aa17.62■□□□□ 0.41
HCFC1-201ENST00000310441 TRIM7Q9C029 511 aa17.62■□□□□ 0.41
HCFC1-201ENST00000310441 PUF60Q9UHX1 559 aaKnown RBP17.62■□□□□ 0.41
HCFC1-201ENST00000310441 TPD52P55327 224 aaPredicted RBP17.62■□□□□ 0.41
HCFC1-201ENST00000310441 BICDL1Q6ZP65 573 aa17.62■□□□□ 0.41
HCFC1-201ENST00000310441 APBB1IPQ7Z5R6 666 aaPredicted RBP17.62■□□□□ 0.41
HCFC1-201ENST00000310441 TRIM47Q96LD4 638 aa17.62■□□□□ 0.41
HCFC1-201ENST00000310441 RPGRQ92834 1020 aaKnown RBP17.61■□□□□ 0.41
HCFC1-201ENST00000310441 KRT13P13646 458 aa17.61■□□□□ 0.41
HCFC1-201ENST00000310441 SAMD15Q9P1V8 674 aa17.61■□□□□ 0.41
HCFC1-201ENST00000310441 NCBP1Q09161 790 aaKnown RBP17.61■□□□□ 0.41
HCFC1-201ENST00000310441 B4GALNT4Q76KP1 1039 aa17.61■□□□□ 0.41
HCFC1-201ENST00000310441 RBM27Q9P2N5 1060 aaKnown RBP17.61■□□□□ 0.41
HCFC1-201ENST00000310441 SH3BGRP55822 239 aaPredicted RBP17.61■□□□□ 0.41
HCFC1-201ENST00000310441 PROSER2Q86WR7 435 aaPredicted RBP17.61■□□□□ 0.41
HCFC1-201ENST00000310441 HDAC9Q9UKV0 1011 aa17.61■□□□□ 0.41
HCFC1-201ENST00000310441 BICDL2A1A5D9 508 aa17.61■□□□□ 0.41
HCFC1-201ENST00000310441 PRDM11Q9NQV5 511 aa17.61■□□□□ 0.41
HCFC1-201ENST00000310441 GOLGA8AA7E2F4 631 aa17.61■□□□□ 0.41
HCFC1-201ENST00000310441 ZGPATQ8N5A5 531 aaKnown RBP17.61■□□□□ 0.41
HCFC1-201ENST00000310441 CDCA7LQ96GN5 454 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms