RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 BCL11AQ9H165 835 aa27.93■■■□□ 2.06
IRF3-201ENST00000309877 LRRC4BQ9NT99 713 aa27.93■■■□□ 2.06
IRF3-201ENST00000309877 RAB11FIP3O75154 756 aa27.92■■■□□ 2.06
IRF3-201ENST00000309877 AK7Q96M32 723 aa27.92■■■□□ 2.06
IRF3-201ENST00000309877 LRRCC1Q9C099 1032 aa27.92■■■□□ 2.06
IRF3-201ENST00000309877 SMARCA5O60264 1052 aaPredicted RBP27.91■■■□□ 2.06
IRF3-201ENST00000309877 HMGB2P26583 209 aaKnown RBP27.91■■■□□ 2.06
IRF3-201ENST00000309877 RABL6Q3YEC7 729 aaPredicted RBP27.91■■■□□ 2.06
IRF3-201ENST00000309877 FAM89AQ96GI7 184 aa27.9■■■□□ 2.06
IRF3-201ENST00000309877 NUP98P52948 1817 aa27.89■■■□□ 2.06
IRF3-201ENST00000309877 FOXO4P98177 505 aa27.89■■■□□ 2.06
IRF3-201ENST00000309877 OS9Q13438 667 aaPredicted RBP27.89■■■□□ 2.06
IRF3-201ENST00000309877 CLEC4GQ6UXB4 293 aa27.89■■■□□ 2.06
IRF3-201ENST00000309877 TRMT112Q9UI30 125 aaKnown RBP27.89■■■□□ 2.06
IRF3-201ENST00000309877 NOP58Q9Y2X3 529 aaKnown RBP27.89■■■□□ 2.06
IRF3-201ENST00000309877 APBA3O96018 575 aa27.88■■■□□ 2.05
IRF3-201ENST00000309877 LMBR1LQ6UX01 489 aa27.88■■■□□ 2.05
IRF3-201ENST00000309877 ANKRD36CQ5JPF3 1778 aa27.88■■■□□ 2.05
IRF3-201ENST00000309877 PARP10Q53GL7 1025 aa27.87■■■□□ 2.05
IRF3-201ENST00000309877 TAF1LQ8IZX4 1826 aa27.87■■■□□ 2.05
IRF3-201ENST00000309877 UBN2Q6ZU65 1347 aa27.87■■■□□ 2.05
IRF3-201ENST00000309877 TXNRD1Q16881 649 aa27.87■■■□□ 2.05
IRF3-201ENST00000309877 SMIM5Q71RC9 77 aa27.87■■■□□ 2.05
IRF3-201ENST00000309877 PA2G4Q9UQ80 394 aaKnown RBP27.87■■■□□ 2.05
IRF3-201ENST00000309877 CHMP3Q9Y3E7 222 aa27.87■■■□□ 2.05
IRF3-201ENST00000309877 C4BP0C0L5 1744 aa27.87■■■□□ 2.05
IRF3-201ENST00000309877 PLSCR1O15162 318 aa27.86■■■□□ 2.05
IRF3-201ENST00000309877 RGL2O15211 777 aa27.86■■■□□ 2.05
IRF3-201ENST00000309877 ZPR1O75312 459 aa27.86■■■□□ 2.05
IRF3-201ENST00000309877 C16orf71Q8IYS4 520 aaPredicted RBP27.86■■■□□ 2.05
IRF3-201ENST00000309877 KIF1BPQ96EK5 621 aa27.86■■■□□ 2.05
IRF3-201ENST00000309877 NARFQ9UHQ1 456 aa27.86■■■□□ 2.05
IRF3-201ENST00000309877 NIP7Q9Y221 180 aaKnown RBP eCLIP27.86■■■□□ 2.05
IRF3-201ENST00000309877 CDHR2Q9BYE9 1310 aa27.86■■■□□ 2.05
IRF3-201ENST00000309877 G3BP1Q13283 466 aaKnown RBP eCLIP27.85■■■□□ 2.05
IRF3-201ENST00000309877 FAM161AQ3B820 660 aa27.85■■■□□ 2.05
IRF3-201ENST00000309877 TRAPPC3LQ5T215 181 aa27.84■■■□□ 2.05
IRF3-201ENST00000309877 ERC1Q8IUD2 1116 aa27.84■■■□□ 2.05
IRF3-201ENST00000309877 RHPN1Q8TCX5 695 aa27.84■■■□□ 2.05
IRF3-201ENST00000309877 ARHGEF1Q92888 912 aaKnown RBP27.84■■■□□ 2.05
IRF3-201ENST00000309877 PLA2G12BQ9BX93 195 aa27.84■■■□□ 2.05
IRF3-201ENST00000309877 SUSD4Q5VX71 490 aa27.84■■■□□ 2.05
IRF3-201ENST00000309877 UTP14AQ9BVJ6 771 aaKnown RBP27.84■■■□□ 2.05
IRF3-201ENST00000309877 PHF14O94880 888 aa27.83■■■□□ 2.05
IRF3-201ENST00000309877 USPL1Q5W0Q7 1092 aa27.83■■■□□ 2.05
IRF3-201ENST00000309877 PLEKHM2Q8IWE5 1019 aa27.83■■■□□ 2.05
IRF3-201ENST00000309877 RFC4P35249 363 aa27.82■■■□□ 2.04
IRF3-201ENST00000309877 PROM2Q8N271 834 aa27.82■■■□□ 2.04
IRF3-201ENST00000309877 BACH2Q9BYV9 841 aa27.82■■■□□ 2.04
IRF3-201ENST00000309877 FAM177BA6PVY3 158 aa27.81■■■□□ 2.04
IRF3-201ENST00000309877 IRS4O14654 1257 aaPredicted RBP27.81■■■□□ 2.04
IRF3-201ENST00000309877 ADRA2BP18089 450 aa27.81■■■□□ 2.04
IRF3-201ENST00000309877 RFX5P48382 616 aaPredicted RBP27.81■■■□□ 2.04
IRF3-201ENST00000309877 SYNE4Q8N205 404 aa27.81■■■□□ 2.04
IRF3-201ENST00000309877 COPRSQ9NQ92 184 aa27.81■■■□□ 2.04
IRF3-201ENST00000309877 SRP68Q9UHB9 627 aaKnown RBP27.81■■■□□ 2.04
IRF3-201ENST00000309877 BCORQ6W2J9 1755 aa27.81■■■□□ 2.04
IRF3-201ENST00000309877 AMIGO3Q86WK7 504 aa27.81■■■□□ 2.04
IRF3-201ENST00000309877 KLHDC4Q8TBB5 520 aa27.81■■■□□ 2.04
IRF3-201ENST00000309877 SIL1Q9H173 461 aa27.81■■■□□ 2.04
IRF3-201ENST00000309877 IL1RAPL2Q9NP60 686 aa27.81■■■□□ 2.04
IRF3-201ENST00000309877 OTUD7AQ8TE49 926 aaPredicted RBP27.8■■■□□ 2.04
IRF3-201ENST00000309877 SH3TC1Q8TE82 1336 aa27.8■■■□□ 2.04
IRF3-201ENST00000309877 PTPN12Q05209 780 aaKnown RBP27.79■■■□□ 2.04
IRF3-201ENST00000309877 EP400Q96L91 3159 aa27.79■■■□□ 2.04
IRF3-201ENST00000309877 BCL2L12Q9HB09 334 aa27.78■■■□□ 2.04
IRF3-201ENST00000309877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.77■■■□□ 2.04
IRF3-201ENST00000309877 PDE8AO60658 829 aa27.77■■■□□ 2.04
IRF3-201ENST00000309877 CSF1RP07333 972 aa27.77■■■□□ 2.04
IRF3-201ENST00000309877 HSP90B1P14625 803 aaKnown RBP27.77■■■□□ 2.04
IRF3-201ENST00000309877 C8orf34Q49A92 452 aa27.77■■■□□ 2.04
IRF3-201ENST00000309877 BICDL1Q6ZP65 573 aa27.77■■■□□ 2.04
IRF3-201ENST00000309877 SCN7AQ01118 1682 aa27.77■■■□□ 2.04
IRF3-201ENST00000309877 NTSR2O95665 410 aa27.76■■■□□ 2.03
IRF3-201ENST00000309877 CCDC57Q2TAC2 916 aa27.76■■■□□ 2.03
IRF3-201ENST00000309877 TBC1D9BQ66K14 1250 aa27.76■■■□□ 2.03
IRF3-201ENST00000309877 USP42Q9H9J4 1324 aaKnown RBP27.76■■■□□ 2.03
IRF3-201ENST00000309877 SSFA2P28290 1259 aa27.75■■■□□ 2.03
IRF3-201ENST00000309877 CTSWP56202 376 aa27.75■■■□□ 2.03
IRF3-201ENST00000309877 BMP2KLQ5H9B9 411 aa27.75■■■□□ 2.03
IRF3-201ENST00000309877 CLASRPQ8N2M8 674 aaKnown RBP27.75■■■□□ 2.03
IRF3-201ENST00000309877 SETDB2Q96T68 719 aa27.75■■■□□ 2.03
IRF3-201ENST00000309877 MX1P20591 662 aa27.74■■■□□ 2.03
IRF3-201ENST00000309877 CCDC85AQ96PX6 553 aaPredicted RBP27.74■■■□□ 2.03
IRF3-201ENST00000309877 SASH1O94885 1247 aa27.73■■■□□ 2.03
IRF3-201ENST00000309877 PDE1AP54750 535 aa27.73■■■□□ 2.03
IRF3-201ENST00000309877 IFIT5Q13325 482 aaKnown RBP27.73■■■□□ 2.03
IRF3-201ENST00000309877 TTLL11Q8NHH1 800 aa27.73■■■□□ 2.03
IRF3-201ENST00000309877 HCLS1P14317 486 aaPredicted RBP27.72■■■□□ 2.03
IRF3-201ENST00000309877 TTC22Q5TAA0 569 aa27.72■■■□□ 2.03
IRF3-201ENST00000309877 NUTM1Q86Y26 1132 aa27.72■■■□□ 2.03
IRF3-201ENST00000309877 OSBPL3Q9H4L5 887 aa27.72■■■□□ 2.03
IRF3-201ENST00000309877 TAF7LQ5H9L4 462 aa27.72■■■□□ 2.03
IRF3-201ENST00000309877 RBM19Q9Y4C8 960 aaKnown RBP27.72■■■□□ 2.03
IRF3-201ENST00000309877 SALL3Q9BXA9 1300 aa27.71■■■□□ 2.03
IRF3-201ENST00000309877 NYXQ9GZU5 481 aa27.71■■■□□ 2.03
IRF3-201ENST00000309877 GTF2E1P29083 439 aaPredicted RBP27.7■■■□□ 2.02
IRF3-201ENST00000309877 ZNF594Q96JF6 807 aaPredicted RBP27.7■■■□□ 2.02
IRF3-201ENST00000309877 TFCP2L1Q9NZI6 479 aa27.7■■■□□ 2.02
IRF3-201ENST00000309877 TNS1Q9HBL0 1735 aaKnown RBP27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms