RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 BMP2KLQ5H9B9 411 aa13.65□□□□□ -0.23
TRIM59-201ENST00000309784 FAM196AQ6ZSG2 479 aa13.65□□□□□ -0.23
TRIM59-201ENST00000309784 RTCBQ9Y3I0 505 aaKnown RBP13.65□□□□□ -0.23
TRIM59-201ENST00000309784 SHANK3Q9BYB0 1731 aa13.64□□□□□ -0.23
TRIM59-201ENST00000309784 SEC24BO95487 1268 aa13.64□□□□□ -0.23
TRIM59-201ENST00000309784 IBTKQ9P2D0 1353 aaPredicted RBP13.64□□□□□ -0.23
TRIM59-201ENST00000309784 RXRBP28702 533 aa13.64□□□□□ -0.23
TRIM59-201ENST00000309784 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
TRIM59-201ENST00000309784 SYNE4Q8N205 404 aa13.64□□□□□ -0.23
TRIM59-201ENST00000309784 CDC45O75419 566 aa13.64□□□□□ -0.23
TRIM59-201ENST00000309784 POLA2Q14181 598 aa13.64□□□□□ -0.23
TRIM59-201ENST00000309784 LINC00116Q8NCU8 138 aa13.64□□□□□ -0.23
TRIM59-201ENST00000309784 ITGB4P16144 1822 aa13.63□□□□□ -0.23
TRIM59-201ENST00000309784 IRS4O14654 1257 aaPredicted RBP13.63□□□□□ -0.23
TRIM59-201ENST00000309784 GORABQ5T7V8 394 aa13.63□□□□□ -0.23
TRIM59-201ENST00000309784 INTS5Q6P9B9 1019 aaKnown RBP13.63□□□□□ -0.23
TRIM59-201ENST00000309784 KAZALD1Q96I82 304 aa13.63□□□□□ -0.23
TRIM59-201ENST00000309784 ZNF594Q96JF6 807 aaPredicted RBP13.63□□□□□ -0.23
TRIM59-201ENST00000309784 EIF5P55010 431 aaKnown RBP13.63□□□□□ -0.23
TRIM59-201ENST00000309784 IFIT5Q13325 482 aaKnown RBP13.63□□□□□ -0.23
TRIM59-201ENST00000309784 H7C1W4 665 aa13.62□□□□□ -0.23
TRIM59-201ENST00000309784 HCLS1P14317 486 aaPredicted RBP13.62□□□□□ -0.23
TRIM59-201ENST00000309784 RFC4P35249 363 aa13.62□□□□□ -0.23
TRIM59-201ENST00000309784 NLRP10Q86W26 655 aa13.62□□□□□ -0.23
TRIM59-201ENST00000309784 ISCA1Q9BUE6 129 aa13.62□□□□□ -0.23
TRIM59-201ENST00000309784 CNNM1Q9NRU3 951 aa13.62□□□□□ -0.23
TRIM59-201ENST00000309784 ERC2O15083 957 aa13.61□□□□□ -0.23
TRIM59-201ENST00000309784 SDSP20132 328 aa13.61□□□□□ -0.23
TRIM59-201ENST00000309784 ZBTB38Q8NAP3 1195 aaPredicted RBP13.61□□□□□ -0.23
TRIM59-201ENST00000309784 MTX1Q13505 466 aa13.61□□□□□ -0.23
TRIM59-201ENST00000309784 UTP14AQ9BVJ6 771 aaKnown RBP13.61□□□□□ -0.23
TRIM59-201ENST00000309784 COL15A1P39059 1388 aa13.61□□□□□ -0.23
TRIM59-201ENST00000309784 PCCAP05165 728 aaPredicted RBP13.61□□□□□ -0.23
TRIM59-201ENST00000309784 GSPT1P15170 499 aaKnown RBP13.61□□□□□ -0.23
TRIM59-201ENST00000309784 TBC1D9Q6ZT07 1266 aa13.6□□□□□ -0.23
TRIM59-201ENST00000309784 ERVV-1B6SEH8 477 aa13.6□□□□□ -0.23
TRIM59-201ENST00000309784 APBA3O96018 575 aa13.6□□□□□ -0.23
TRIM59-201ENST00000309784 USPL1Q5W0Q7 1092 aa13.6□□□□□ -0.23
TRIM59-201ENST00000309784 DDRGK1Q96HY6 314 aa13.6□□□□□ -0.23
TRIM59-201ENST00000309784 BCL11BQ9C0K0 894 aaPredicted RBP13.6□□□□□ -0.23
TRIM59-201ENST00000309784 SRP68Q9UHB9 627 aaKnown RBP13.6□□□□□ -0.23
TRIM59-201ENST00000309784 UTYO14607 1347 aa13.6□□□□□ -0.23
TRIM59-201ENST00000309784 TFCP2Q12800 502 aa13.6□□□□□ -0.23
TRIM59-201ENST00000309784 CEP126Q9P2H0 1117 aa13.6□□□□□ -0.23
TRIM59-201ENST00000309784 SH3TC1Q8TE82 1336 aa13.6□□□□□ -0.23
TRIM59-201ENST00000309784 ATRNO75882 1429 aa13.59□□□□□ -0.23
TRIM59-201ENST00000309784 CCDC24Q8N4L8 307 aa13.59□□□□□ -0.23
TRIM59-201ENST00000309784 TRAPPC3LQ5T215 181 aa13.59□□□□□ -0.23
TRIM59-201ENST00000309784 LDHAL6AQ6ZMR3 332 aa13.59□□□□□ -0.23
TRIM59-201ENST00000309784 C22orf23Q9BZE7 217 aa13.59□□□□□ -0.23
TRIM59-201ENST00000309784 ANKRD18BA2A2Z9 1011 aa13.59□□□□□ -0.23
TRIM59-201ENST00000309784 SLC4A3P48751 1232 aa13.59□□□□□ -0.23
TRIM59-201ENST00000309784 BOLA2Q9H3K6 86 aa13.59□□□□□ -0.23
TRIM59-201ENST00000309784 PTPN12Q05209 780 aaKnown RBP13.58□□□□□ -0.24
TRIM59-201ENST00000309784 SUSD4Q5VX71 490 aa13.58□□□□□ -0.24
TRIM59-201ENST00000309784 SETDB2Q96T68 719 aa13.58□□□□□ -0.24
TRIM59-201ENST00000309784 IPO9Q96P70 1041 aaKnown RBP13.58□□□□□ -0.24
TRIM59-201ENST00000309784 DNAJC2Q99543 621 aaKnown RBP13.58□□□□□ -0.24
TRIM59-201ENST00000309784 MPHOSPH8Q99549 860 aa13.58□□□□□ -0.24
TRIM59-201ENST00000309784 NOP58Q9Y2X3 529 aaKnown RBP13.58□□□□□ -0.24
TRIM59-201ENST00000309784 NBPF5PQ86XG9 351 aaPredicted RBP13.58□□□□□ -0.24
TRIM59-201ENST00000309784 CNTROBQ8N137 903 aa13.58□□□□□ -0.24
TRIM59-201ENST00000309784 ECHDC1Q9NTX5 307 aa13.58□□□□□ -0.24
TRIM59-201ENST00000309784 ITGA6P23229 1130 aa13.57□□□□□ -0.24
TRIM59-201ENST00000309784 FOXO4P98177 505 aa13.57□□□□□ -0.24
TRIM59-201ENST00000309784 PARP10Q53GL7 1025 aa13.57□□□□□ -0.24
TRIM59-201ENST00000309784 METTL24Q5JXM2 366 aa13.57□□□□□ -0.24
TRIM59-201ENST00000309784 LAMB4A4D0S4 1761 aa13.57□□□□□ -0.24
TRIM59-201ENST00000309784 SASH1O94885 1247 aa13.57□□□□□ -0.24
TRIM59-201ENST00000309784 CAMTA2O94983 1202 aa13.57□□□□□ -0.24
TRIM59-201ENST00000309784 EAF2Q96CJ1 260 aaPredicted RBP13.57□□□□□ -0.24
TRIM59-201ENST00000309784 PDE8AO60658 829 aa13.57□□□□□ -0.24
TRIM59-201ENST00000309784 RPS6KA4O75676 772 aa13.57□□□□□ -0.24
TRIM59-201ENST00000309784 GLRX3O76003 335 aaKnown RBP13.57□□□□□ -0.24
TRIM59-201ENST00000309784 TRIM28Q13263 835 aaKnown RBP13.57□□□□□ -0.24
TRIM59-201ENST00000309784 LRRC24Q50LG9 513 aa13.57□□□□□ -0.24
TRIM59-201ENST00000309784 COPRSQ9NQ92 184 aa13.57□□□□□ -0.24
TRIM59-201ENST00000309784 DIAPH3Q9NSV4 1193 aa13.57□□□□□ -0.24
TRIM59-201ENST00000309784 GLI3P10071 1580 aa13.56□□□□□ -0.24
TRIM59-201ENST00000309784 ONECUT3O60422 494 aaPredicted RBP13.56□□□□□ -0.24
TRIM59-201ENST00000309784 HSP90B1P14625 803 aaKnown RBP13.56□□□□□ -0.24
TRIM59-201ENST00000309784 PUS3Q9BZE2 481 aaKnown RBP13.56□□□□□ -0.24
TRIM59-201ENST00000309784 GREM2Q9H772 168 aa13.56□□□□□ -0.24
TRIM59-201ENST00000309784 ANO2Q9NQ90 1003 aa13.56□□□□□ -0.24
TRIM59-201ENST00000309784 TFCP2L1Q9NZI6 479 aa13.56□□□□□ -0.24
TRIM59-201ENST00000309784 UBN2Q6ZU65 1347 aa13.56□□□□□ -0.24
TRIM59-201ENST00000309784 EYA2O00167 538 aa13.56□□□□□ -0.24
TRIM59-201ENST00000309784 CTSWP56202 376 aa13.56□□□□□ -0.24
TRIM59-201ENST00000309784 IL15P40933 162 aaPredicted RBP13.55□□□□□ -0.24
TRIM59-201ENST00000309784 CASP7P55210 303 aa13.55□□□□□ -0.24
TRIM59-201ENST00000309784 TIMM10P62072 90 aa13.55□□□□□ -0.24
TRIM59-201ENST00000309784 RABL6Q3YEC7 729 aaPredicted RBP13.55□□□□□ -0.24
TRIM59-201ENST00000309784 UBR2Q8IWV8 1755 aa13.55□□□□□ -0.24
TRIM59-201ENST00000309784 WNK3Q9BYP7 1800 aa13.55□□□□□ -0.24
TRIM59-201ENST00000309784 FSD1Q9BTV5 496 aa13.55□□□□□ -0.24
TRIM59-201ENST00000309784 TLR7Q9NYK1 1049 aaKnown RBP13.55□□□□□ -0.24
TRIM59-201ENST00000309784 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.55□□□□□ -0.24
TRIM59-201ENST00000309784 ARHGEF1Q92888 912 aaKnown RBP13.55□□□□□ -0.24
TRIM59-201ENST00000309784 AFDNP55196 1824 aaKnown RBP13.54□□□□□ -0.24
TRIM59-201ENST00000309784 EIF5BO60841 1220 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms