RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 TEFQ10587 303 aa13.17□□□□□ -0.3
PTPN7-201ENST00000309017 EVI5LQ96CN4 794 aa13.17□□□□□ -0.3
PTPN7-201ENST00000309017 FEZ1Q99689 392 aa13.17□□□□□ -0.3
PTPN7-201ENST00000309017 TRMT1Q9NXH9 659 aaKnown RBP13.17□□□□□ -0.3
PTPN7-201ENST00000309017 NCBP1Q09161 790 aaKnown RBP13.17□□□□□ -0.3
PTPN7-201ENST00000309017 ANKRD1Q15327 319 aa13.17□□□□□ -0.3
PTPN7-201ENST00000309017 NMIQ13287 307 aaPredicted RBP13.17□□□□□ -0.3
PTPN7-201ENST00000309017 CEP135Q66GS9 1140 aa13.17□□□□□ -0.3
PTPN7-201ENST00000309017 SLC26A8Q96RN1 970 aa13.17□□□□□ -0.3
PTPN7-201ENST00000309017 OGFRQ9NZT2 677 aa13.17□□□□□ -0.3
PTPN7-201ENST00000309017 CGNQ9P2M7 1197 aaKnown RBP13.17□□□□□ -0.3
PTPN7-201ENST00000309017 POLA2Q14181 598 aa13.16□□□□□ -0.3
PTPN7-201ENST00000309017 NR1I2O75469 434 aa13.16□□□□□ -0.3
PTPN7-201ENST00000309017 ANKRD7Q92527 254 aa13.16□□□□□ -0.3
PTPN7-201ENST00000309017 TM6SF1Q9BZW5 370 aa13.16□□□□□ -0.3
PTPN7-201ENST00000309017 PAXBP1Q9Y5B6 917 aa13.16□□□□□ -0.3
PTPN7-201ENST00000309017 A2ML1A8K2U0 1454 aa13.16□□□□□ -0.3
PTPN7-201ENST00000309017 LEO1Q8WVC0 666 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-201ENST00000309017 IL17RAQ96F46 866 aa13.16□□□□□ -0.3
PTPN7-201ENST00000309017 PTPN14Q15678 1187 aa13.15□□□□□ -0.3
PTPN7-201ENST00000309017 ERC1Q8IUD2 1116 aa13.15□□□□□ -0.3
PTPN7-201ENST00000309017 HIP1O00291 1037 aa13.15□□□□□ -0.3
PTPN7-201ENST00000309017 CACTINQ8WUQ7 758 aaKnown RBP13.15□□□□□ -0.3
PTPN7-201ENST00000309017 CCDC9Q9Y3X0 531 aaKnown RBP13.15□□□□□ -0.3
PTPN7-201ENST00000309017 SLC27A2O14975 620 aa13.15□□□□□ -0.31
PTPN7-201ENST00000309017 CLSTN2Q9H4D0 955 aa13.15□□□□□ -0.31
PTPN7-201ENST00000309017 AIMP1Q12904 312 aaKnown RBP13.14□□□□□ -0.31
PTPN7-201ENST00000309017 CCDC73Q6ZRK6 1079 aa13.14□□□□□ -0.31
PTPN7-201ENST00000309017 SBNO1A3KN83 1393 aa13.14□□□□□ -0.31
PTPN7-201ENST00000309017 CTIFO43310 598 aaKnown RBP13.14□□□□□ -0.31
PTPN7-201ENST00000309017 TAOK2Q9UL54 1235 aa13.14□□□□□ -0.31
PTPN7-201ENST00000309017 MAP3K5Q99683 1374 aa13.14□□□□□ -0.31
PTPN7-201ENST00000309017 PDIA4P13667 645 aaKnown RBP13.14□□□□□ -0.31
PTPN7-201ENST00000309017 SKILP12757 684 aa13.13□□□□□ -0.31
PTPN7-201ENST00000309017 ST3GAL1Q11201 340 aa13.13□□□□□ -0.31
PTPN7-201ENST00000309017 BRF1Q92994 677 aa13.13□□□□□ -0.31
PTPN7-201ENST00000309017 CHMP4AQ9BY43 222 aa13.13□□□□□ -0.31
PTPN7-201ENST00000309017 HDAC5Q9UQL6 1122 aa13.13□□□□□ -0.31
PTPN7-201ENST00000309017 IGSF1Q8N6C5 1336 aa13.13□□□□□ -0.31
PTPN7-201ENST00000309017 PLEKHG3A1L390 1219 aa13.13□□□□□ -0.31
PTPN7-201ENST00000309017 JAK2O60674 1132 aa13.13□□□□□ -0.31
PTPN7-201ENST00000309017 PPFIA3O75145 1194 aa13.13□□□□□ -0.31
PTPN7-201ENST00000309017 NECTIN1Q15223 517 aa13.13□□□□□ -0.31
PTPN7-201ENST00000309017 KINO60870 393 aaKnown RBP13.12□□□□□ -0.31
PTPN7-201ENST00000309017 BEND3Q5T5X7 828 aa13.12□□□□□ -0.31
PTPN7-201ENST00000309017 MAP3K2Q9Y2U5 619 aa13.12□□□□□ -0.31
PTPN7-201ENST00000309017 USP6P35125 1406 aa13.12□□□□□ -0.31
PTPN7-201ENST00000309017 ELP1O95163 1332 aa13.12□□□□□ -0.31
PTPN7-201ENST00000309017 ROBO2Q9HCK4 1378 aa13.12□□□□□ -0.31
PTPN7-201ENST00000309017 CWF19L2Q2TBE0 894 aaKnown RBP13.12□□□□□ -0.31
PTPN7-201ENST00000309017 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.12□□□□□ -0.31
PTPN7-201ENST00000309017 ABTB2Q8N961 1025 aa13.12□□□□□ -0.31
PTPN7-201ENST00000309017 USP16Q9Y5T5 823 aa13.12□□□□□ -0.31
PTPN7-201ENST00000309017 ARID5BQ14865 1188 aa13.12□□□□□ -0.31
PTPN7-201ENST00000309017 LRRC2Q9BYS8 371 aa13.12□□□□□ -0.31
PTPN7-201ENST00000309017 CFAP45Q9UL16 551 aa13.12□□□□□ -0.31
PTPN7-201ENST00000309017 CCDC144BQ3MJ40 725 aa13.11□□□□□ -0.31
PTPN7-201ENST00000309017 CCDC144CPQ8IYA2 1237 aa13.11□□□□□ -0.31
PTPN7-201ENST00000309017 TDRD7Q8NHU6 1098 aaKnown RBP13.11□□□□□ -0.31
PTPN7-201ENST00000309017 OVOS2A0A0J9YW53 1432 aa13.11□□□□□ -0.31
PTPN7-201ENST00000309017 OVOS2Q6IE36 1432 aa13.11□□□□□ -0.31
PTPN7-201ENST00000309017 A0A0D9SFI3 127 aa13.11□□□□□ -0.31
PTPN7-201ENST00000309017 CDK11BP21127 795 aaKnown RBP13.11□□□□□ -0.31
PTPN7-201ENST00000309017 RPS6KB1P23443 525 aa13.11□□□□□ -0.31
PTPN7-201ENST00000309017 A0A087WWV3 80 aa13.11□□□□□ -0.31
PTPN7-201ENST00000309017 ERICH4A6NGS2 130 aa13.11□□□□□ -0.31
PTPN7-201ENST00000309017 BTBD11A6QL63 1104 aa13.11□□□□□ -0.31
PTPN7-201ENST00000309017 KCNQ3O43525 872 aa13.1□□□□□ -0.31
PTPN7-201ENST00000309017 NRDCO43847 1150 aa13.1□□□□□ -0.31
PTPN7-201ENST00000309017 FMNL2Q96PY5 1086 aa13.1□□□□□ -0.31
PTPN7-201ENST00000309017 SDF4Q9BRK5 362 aa13.1□□□□□ -0.31
PTPN7-201ENST00000309017 CTNNA3Q9UI47 895 aa13.1□□□□□ -0.31
PTPN7-201ENST00000309017 ZNF215Q9UL58 517 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-201ENST00000309017 TTC21AQ8NDW8 1320 aa13.1□□□□□ -0.31
PTPN7-201ENST00000309017 CCDC69A6NI79 296 aa13.1□□□□□ -0.31
PTPN7-201ENST00000309017 ME1P48163 572 aa13.1□□□□□ -0.31
PTPN7-201ENST00000309017 COL9A3Q14050 684 aaPredicted RBP13.1□□□□□ -0.31
PTPN7-201ENST00000309017 PLA2G4DQ86XP0 818 aa13.1□□□□□ -0.31
PTPN7-201ENST00000309017 CCAR1Q8IX12 1150 aaKnown RBP13.1□□□□□ -0.31
PTPN7-201ENST00000309017 MAP4K1Q92918 833 aa13.1□□□□□ -0.31
PTPN7-201ENST00000309017 HOXC9P31274 260 aa13.1□□□□□ -0.31
PTPN7-201ENST00000309017 STX1AQ16623 288 aa13.1□□□□□ -0.31
PTPN7-201ENST00000309017 KRT222Q8N1A0 295 aa13.1□□□□□ -0.31
PTPN7-201ENST00000309017 KIF18AQ8NI77 898 aa13.1□□□□□ -0.31
PTPN7-201ENST00000309017 LGR6Q9HBX8 967 aa13.1□□□□□ -0.31
PTPN7-201ENST00000309017 GUCY1B3Q02153 619 aa13.09□□□□□ -0.31
PTPN7-201ENST00000309017 PGBD1Q96JS3 809 aa13.09□□□□□ -0.31
PTPN7-201ENST00000309017 DNAJC2Q99543 621 aaKnown RBP13.09□□□□□ -0.31
PTPN7-201ENST00000309017 SF3A1Q15459 793 aaKnown RBP13.09□□□□□ -0.31
PTPN7-201ENST00000309017 MPRIPQ6WCQ1 1025 aa13.09□□□□□ -0.31
PTPN7-201ENST00000309017 LRRC8AQ8IWT6 810 aa13.09□□□□□ -0.31
PTPN7-201ENST00000309017 KLHL34Q8N239 644 aa13.09□□□□□ -0.31
PTPN7-201ENST00000309017 ERCC4Q92889 916 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-201ENST00000309017 SMC2O95347 1197 aa13.09□□□□□ -0.31
PTPN7-201ENST00000309017 GORABQ5T7V8 394 aa13.09□□□□□ -0.31
PTPN7-201ENST00000309017 EAF2Q96CJ1 260 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-201ENST00000309017 SIRT1Q96EB6 747 aa13.09□□□□□ -0.31
PTPN7-201ENST00000309017 EDC3Q96F86 508 aaKnown RBP13.09□□□□□ -0.31
PTPN7-201ENST00000309017 TAF6LQ9Y6J9 622 aa13.09□□□□□ -0.31
PTPN7-201ENST00000309017 USP27XA6NNY8 438 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms